Oncorhynchus kisutch (coho salmon): 109904739
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Entry
109904739 CDS
T09179
Name
(RefSeq) protocadherin-19 isoform X7
KO
K16499
protocadherin delta 2
Organism
oki
Oncorhynchus kisutch (coho salmon)
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
oki04515
]
109904739
Cell adhesion molecules [BR:
oki04515
]
Cadherins
Protocadherins
109904739
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
PepSY
Cadherin_C_2
Motif
Other DBs
NCBI-GeneID:
109904739
NCBI-ProteinID:
XP_020357481
Ensembl:
ENSOKIG00005031762
LinkDB
All DBs
Position
LG15:42286173..42366259
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AA seq
1098 aa
AA seq
DB search
MYAREMDFIQIIWIVILCWTGVDSVINLKYSINEEQKAGYIIGNVTKDAQTQGFAIAPRA
PYLRVISNSEPRWVELSPAGLLLTHQKIDRDVACRQTAKCTVSLEVMSNSMEICVIKVEI
VDLNDNAPRFPTNHIDIEISENASPGTRFPLEGASDPDSGIFGVQSYSITPNELFGLEIK
TRGDGSKIAELVVQKSLDRETQSHYSYEISAEDGGDPPKIGAVQLNVKVIDSNDNNPVFD
QPVYTVNVMENSPINTLVIDLNATDPDEGTNGEVVYSFNSYVTEKTRDVFKIDPRTGIIT
VNGPLDYEVTHIYEIDVQAKDLGPNSIPAHCKVTVNVMDANDNPPVISLLSVNTELIEVS
ENAPRGYVIALVRVSDKDAGANGKVQCRLQGNVPFRLQEYESFSTILVDGRLDREQRDTY
NLTIQAEDSGTPPLRATKSFVVKVTDENDNPPHFLKPHYQEMVLENNLPGSCLLAVSAVD
PDLGMNGTVSYTIVPSEIKHMDVNTYVSINPSGRIYSMRSFDHEYTRTFDFKVLARDQGN
PSLSSNATVRIVVLDVNDNTPVMTTPTLVNGTAEVSIPRNAGVGYLVTQVKADDYDEGEN
GRLTYTISEGDRLFFEIDQVNGEVRSTKMFGEQVKSTYEITVVARDHGKPSLSASAYIVV
YLSPDLNAQESIGPVNLSLIFIIALGSIAAILFVTMIFVAVKCKRDNKEIRTYNCRVAEY
SYGSQKKSSKKKKLSKNDIRLVPRDVEETDKMNVVSCSSLTSSLNYFDYHQQSLPLGCRR
SESTFINVDNQNSRNAAPNHGSYQQHSFASGQGPQQPDLIINGMPLPETDNYIDSSYVNS
RAHLIKSTSTFKDLEGNSLKDSGHEESDQTDSEHDVQRGHYIDTAVNDVLNMTIPPNVCQ
LPDQDSSEGFHCQDECRILGHSDRCWMPRVPGPARGKSPEHGHPRNNVIALSIEATTVDV
PHYEDCGTGTIKRTFATFGKDGPEDPERGELKGNKRTMMEAYSPKANGGAVREAGNGREA
ASPITSPVHLKSPLAKAPSGYNTLKCRDAERIANHSMLRQPEGKDSEPAVREINTLLHDS
VHLEKESPSSKRLKDIVL
NT seq
3297 nt
NT seq
+upstream
nt +downstream
nt
atgtacgccagggagatggattttatacaaattatttggatagttattttatgctggact
ggggttgattctgttattaatttgaaatactcgataaacgaagagcagaaagctgggtat
atcattggaaacgtgacaaaggacgcacaaacgcaaggatttgccattgcaccgcgagcg
ccgtacttgcgggtcatctcgaattcagagccgcgatgggtggaactcagcccggctgga
cttctcctcacacatcagaaaatagaccgggatgtggcttgccgacagacggcaaagtgc
actgtctctctggaggtgatgtcaaactctatggagatatgtgtcattaaagttgaaata
gtggatttgaacgataatgcgcccagattccccacaaaccacattgacattgaaatctca
gagaacgcctcccctggtactaggttccccctagagggggcaagcgatccggactcgggg
atcttcggtgtgcaatcatattcgatcaccccgaatgagctcttcgggctggagattaag
actaggggggacgggtccaagattgccgagctcgtagttcaaaaatctttagatcgggag
actcagtctcactattcatacgaaatcagtgcagaagacggtggagaccccccaaagatt
ggcgcagtccagctcaatgttaaagtaatagattcaaatgataataatccagtttttgac
cagcctgtgtatacagtgaacgtgatggagaattctcctattaatacacttgtaattgac
ttgaatgcaacggaccctgacgagggaactaatggtgaggttgtgtactcgtttaacagt
tacgtcaccgagaaaacgagagacgtatttaaaattgaccctagaaccggtattatcact
gtaaatggccctttggattatgaagtaacccatatttacgagattgatgtccaagccaaa
gatttaggtcccaattctattccggctcattgtaaagtcactgtcaatgtgatggatgcg
aacgataacccacctgtcattagtttattgtcggtgaacacggagctgattgaagttagt
gagaacgcgcctcgtggatacgttattgcattagtgagggtctcagacaaggacgcgggc
gcgaatggtaaggtgcagtgtagattacaaggcaacgttcctttcaggctccaggaatac
gagagcttctcaaccatccttgttgatggcaggctagacagagagcagagggacacgtac
aatctaactatccaagcagaggacagtggtaccccccctttacgcgccactaaatcgttt
gtagtgaaagtcacagatgaaaatgataaccctccccactttctaaaaccacattaccaa
gagatggtcctagaaaacaaccttcctggctcatgtttgctggctgtgtcagctgtagat
cctgatttgggcatgaatggcacagtttcatacaccatcgtgcccagtgagattaaacac
atggacgtaaacacatatgtcagcataaatccttcagggcgtatttattccatgagatca
ttcgaccacgagtacactagaacatttgacttcaaagttttggccagggatcaggggaat
ccgtccttgtccagtaacgcgacggtgcgcattgtcgttttggatgtgaatgacaataca
cctgttatgaccactccaaccctggtaaatggcaccgcggaggtatccattccaagaaat
gcaggagtgggttacctggtgacccaagtcaaggccgacgactatgacgagggggagaat
ggaaggctgacctataccatctcggagggggacaggcttttctttgagatagaccaagtg
aatggagaggtgcggtccaccaagatgttcggagagcaggtcaagtcgacatacgagatc
acagtggtggcacgcgaccacgggaaaccgtcgttgtcggcctcggcatacattgtagtt
tacctctcaccggacctgaacgctcaggaatctattggacccgtaaacctgtcgttgatc
ttcatcattgccctgggctctattgctgctatcctgtttgtcactatgatttttgtggca
gtaaagtgcaaaagggataacaaggagatccgaacgtacaactgcagggtggcggagtac
tcatatggcagccagaagaagtccagcaagaagaagaagctgagcaagaacgacatccgc
ctcgtgccgcgcgacgtggaggagacggacaagatgaacgtggtgagttgctcatctctc
acctcctccctcaactacttcgactaccaccagcagagcctgccgctgggctgcaggcgc
tccgagagcaccttcatcaacgtggacaaccagaactcacgcaatgctgcacccaaccac
ggcagttatcagcagcactccttcgccagcgggcagggcccccagcagcctgacctcatc
atcaacggcatgccgctgcctgagacggataattatatcgactccagctatgtgaacagc
cgagcacatcttatcaaaagcacatcaacattcaaggacctggagggcaatagtctgaag
gacagcgggcacgaagagagcgaccagacggacagtgagcatgatgtccagagaggccac
tacatagacacggctgtcaacgacgtgctcaacatgaccataccccccaacgtctgccag
ctgcctgaccaagactcaagcgaaggcttccactgccaggacgagtgtcgcatcctgggc
cattcggaccgctgctggatgccccgtgtgcccggcccagcccgtggcaagtctcctgag
catggccacccacgtaataacgtcattgccctgtccatcgaggccaccaccgtggatgtg
ccccactacgaggactgtggcaccggcaccatcaaacggacttttgccaccttcggcaag
gacggcccagaggacccagagcggggcgagctaaagggcaacaagcggacaatgatggag
gcatacagccccaaggccaacggcggcgccgtgcgcgaggcaggcaacgggcgcgaggca
gccagccccatcacctcccctgtgcacctgaaaagcccgctggccaaggcgccatccggc
tacaacacgctcaagtgtcgcgacgctgagcgcatcgccaaccacagcatgctgcgacag
cccgagggaaaggacagcgagccggccgtccgggagatcaacacgctcctccacgacagc
gtccatcttgagaaggagtctcccagcagcaagcgcctgaaggacattgtgctctaa
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