Oncorhynchus kisutch (coho salmon): 109904821
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Entry
109904821 CDS
T09179
Name
(RefSeq) stAR-related lipid transfer protein 13-like isoform X1
KO
K20632
deleted in liver cancer protein
Organism
oki
Oncorhynchus kisutch (coho salmon)
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oki04131
]
109904821
Membrane trafficking [BR:
oki04131
]
Others
Rho GTPase associated proteins
Rho GTPase-activating proteins
109904821
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
START
RhoGAP
SAM_2
Tra1_central
Motif
Other DBs
NCBI-GeneID:
109904821
NCBI-ProteinID:
XP_031646557
Ensembl:
ENSOKIG00005009205
LinkDB
All DBs
Position
LG15:complement(61374864..61464237)
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AA seq
1684 aa
AA seq
DB search
MDTVLMVTLEERQSLVMSASSGRTFSPQTLAHTQVQTQAQQQTQPETQTHQSSSECASES
SHDDNSSTERGEDGCLTGPLSSVYNRTGAPGIEGKLAVSTGGPAGPVESGSDVSPPDPLD
PLQIVCPGGLLSEPGSVTSPLPDYANNNGLDLHSTSPAEDPCLASNVPSPRIEGDVDVLA
PKIEGNLEVEDSDRPVESGHFLDANLSGQLEDMELGHTSPSQTESDMELEEESPRWTETD
SQPEDHSEGPMDNGHVPTDLEHTEDNHVPFPLGHIHTLLVQSEAEVSHVTISVVQSETFS
SIPSLVVSVDNNMDPFRPPSLPIALSEAPLAGLGLCDHPRIIKHKPSSITFSDYTCSSST
CHSSTDHSVFINDSSDCRESSSEEDDEGDVDEDGDDDDIFPELLQSREFLVSRRRRSSNR
DKVVQKRSSLNPQAEAPVSSTTNTSASSHLSSSSSSKNQNHGGYEAETETSSTEESPLVQ
PQTLWCESMSQLMRKLDQLNLDIEEALSASSSPSDTPCTARRQQCGAVSGTAVNQSLNEK
DSTLLQRGEPDTGECPRQDQHNTTAPRISAIGTRARTKKTVMCSKMTNAGAELEAKEACD
WLRAAGFPQYAQLFEDSQFPIDISPVKKDHDFLDNDLVEPLCRRLNTLNKCASMKLDVNL
PKKKSEDSDEEDLFAISDRWTFECTSRRWSRLKGEGHSPREGEGQGLQTTTSSESVLTDL
SEPEVSSLHSESSGGSGHQAVSTEDSDSSNRNYYDSAAMPEPDSTSLTLPHLPKHLPYYG
SLPAKNSRAGRTRAKDFLHRMETLRSRGTLGRGHCKKLVISAPVLQTEPQALKTLRCVEI
TNGDRSGAEVTTGGPILGLTPQCPSSSEGSHSSGSTVSSPSLQERKPHSQRTDRSDAKRS
GMYLEDLAVFSSLQRIGGVAQGKRGVAEHNQRNEFRSYENLVVHIPKDHKPGTFPKALSI
ESLSPILGASVPRHSDHVNPLEPQSNPHPTYNPREFYHRPLTQFCPRGSRISVYDNVPGS
HLYASTGDLLDMEKEDLFPHLDDILQHVNGLQQIVDRWSKNILPSAGLDGQGIQPAGLKS
SSQITLDFEGTSVLEVQSTSSDGDRDAVSLIETHCTGHRERRDSGVGASLTRPNRLRWPS
FQMSNRLSHSVASLQITNQSAGQLSLLQKFSLLRLTAIMEKYSMSNKQGWTWSVPKFMKR
MKVPDYKDKNVFGVPLIVHVQRSGQPLPLSLQQALRYLRSQCLDQVGLFRKSGVKSRIQA
LRQMNESSPDDVSYEDQSAYDVADMVKQFFRDLPEPLLTSKLGETFLHIYQYVPKDQRLQ
AVQTAIMLMSDENREVLQMLLCFLSDVTSSVEENQMTPMNIAVCLAPSLFHLNILKKDNL
SPRAMQRKYTTGRPDQKDLNENLAATQGLAHMIIECNRLFEIPHEMVTQSRNSYVEADLH
PPTLEELCRQQEEDDASYQTEARPCQTHSETRPQNLYQSYVESRLQELLKEAREKAKGWV
SCTSSDNTELYCKKVGDGNPLRQWRVAVEVEAPPSVLLNRVLRERHLWDVDLLQWKVAET
LDRHTEVFHYVLNRMPPHPSRDFLVLRSWRTDLPKGTCALVCVSVEHEDCPRVGGVRAVV
LESNYLLEPCGSGKSRLTHICRVDLKGRSPEWYNKAFGHLCAAEAARIRNSFQPISTEGP
ETKI
NT seq
5055 nt
NT seq
+upstream
nt +downstream
nt
atggacacagttctgatggttactctggaggagcgacaatctctggtcatgtcagcatca
tctggtaggaccttctcaccacagacactggcacatacacaggtacagacacaggcacag
caacagacacaaccagaaacacagacacaccagtcctcctcagaatgtgcttcagagtct
tctcatgatgacaacagctccacagagagaggtgaggatggttgtttgactggaccacta
agcagtgtctataacaggactggagctcctgggatagaggggaaactagctgttagtact
ggagggccagcaggaccagtagagtctggttctgatgtctcccctcctgaccctctagac
cctctccagatcgtctgtcccgggggtctcctcagtgagccaggcagtgtgacatcacca
ttgcctgattatgccaataacaatggattggatttacacagtacttctccagctgaggac
ccctgccttgcctccaatgttccttctcctaggatagagggagatgtggatgttcttgct
cctaagatagagggaaacctggaggttgaggacagtgacagacctgtagaatcagggcat
ttcctggatgctaacctctctggtcagctagaggacatggagctggggcatacctcgccc
agccagacagagagcgacatggagctagaggaggagtcacccagatggacagaaacagac
agccagcctgaggaccactcagaggggcctatggataacggacatgtcccaactgatctg
gaacacacagaagacaaccatgtgcccttccctctaggacatatccatacccttctggtc
caatcagaggcagaggtcagccatgtcactatctctgtggtccaatcagagacttttagc
tccatcccttctctagtggtcagtgtggacaacaacatggatcccttcagaccaccctcc
ctccccatagccctctctgaggcccccttggcggggctaggcctctgcgatcacccccgc
atcatcaaacacaaacctagctccatcaccttctcagactacacctgtagttcctccacc
tgtcactctagcaccgaccacagtgtcttcatcaatgacagctccgactgcagggagtct
tcctcagaggaggatgatgaaggtgatgttgatgaagatggggatgatgacgacatattc
ccagagctgcttcagagcagggagttcctggtcagtcggaggagaaggagcagcaacaga
gacaaagtagttcagaagagaagttctctgaatccccaggctgaggcaccagtcagctct
acaaccaacacttcagccagctcccacctctcctcctcttcttcctccaaaaaccagaac
cacggcggctacgaggcagagactgagaccagcagcacagaggagtctcccctggtccag
cctcagaccctgtggtgtgagtctatgagccagctgatgaggaaactggaccagctcaat
ctggacatagaggaggctctgagtgcatcatcctccccctcggacacaccctgcaccgca
cgcagacaacagtgtggagctgtgtctgggacggcagtaaaccaatctcttaatgagaag
gacagtacactgctgcagcgaggggaaccagacacaggagaatgtcccagacaggaccaa
cacaataccacggcccctcgtatctcagccataggaaccagagccaggaccaagaagaca
gtcatgtgcagtaagatgaccaatgcaggagcagaactcgaggcaaaggaggcgtgtgat
tggctacgagcggcaggattcccccaatacgctcagctctttgaagactctcagttcccc
atcgatatctctcctgtgaagaaagaccatgactttctggacaacgacctggtggaacct
ctctgcaggcgactcaacaccttgaacaagtgtgcctctatgaaactagatgtcaacctc
cctaagaaaaagagtgaagactctgatgaggaggacctgtttgccatcagtgacagatgg
acgtttgagtgtacgagccgccgctggtccagactaaagggggaggggcatagtcccagg
gagggggagggacagggcctgcagaccaccaccagtagcgagagtgttctaactgacctc
agcgaaccagaagtctcatctctccacagtgagagcagtggggggagtggccaccaggct
gtgagcacagaggactccgacagctctaaccggaactactacgactctgcagcgatgcct
gaacctgactccacctcccttaccctaccacacctccctaagcacctcccctactacggc
tcgctgcccgccaaaaacagccgcgccggacggacccgagccaaggacttcctccaccgc
atggagacactacgttcccggggcacgctgggtagggggcattgcaagaagctggtgatc
agcgctccggtactgcagacagagccacaggccctgaagacgctgcgctgcgtggagatc
accaatggggaccggtcgggggcggaggtaaccactgggggacctatcctagggctaacc
ccccagtgcccctccagcagcgagggcagccactccagcggcagcactgtctcatccccc
agtctgcaggagaggaagccccactcccagcggacggaccggtccgacgccaagcgcagt
ggcatgtatctggaggacttggccgtgttctccagcctgcagcggatcggtggcgtggcc
caggggaagaggggtgtggccgaacacaatcagcgtaacgagttccgctcctacgagaac
ctggtggtccacatccccaaagaccacaagcctggcaccttccccaaggccctgtccata
gagagcctatcccccatcctgggggcctctgtcccccgccacagcgaccacgtcaacccc
ctggagccccagtccaacccccaccctacctataacccgagggagttctaccaccgtccg
ctcacccagttctgcccacggggcagtaggatcagtgtgtacgacaacgtccctgggtct
cacctctatgcctctactggagacctgctggacatggagaaggaagacctgttcccccac
ctggatgacatcctgcagcacgtcaacggcctgcagcagatagtggaccgctggtccaag
aacattctgccctctgcaggcctggacggacaggggatccagcctgcaggtctgaagtca
tccagccagatcacgctggactttgaggggacgtctgttctggaggtacagagcacatcc
agtgacggggacagagacgccgtgtccctcattgagactcactgtacaggacatagagag
aggagggactcgggggtgggggcatcactaaccagacccaaccgtctgcgatggcccagc
ttccagatgtccaaccggctcagccactcagtggcctcgctccagatcaccaaccaatca
gcaggccagctcagcctgctgcagaagttctctctcctccgcctcactgccatcatggag
aaatactccatgtccaacaaacagggatggacctggtcagttccaaagttcatgaagagg
atgaaggttccagactacaaggacaagaatgtgtttggtgttcctctgatcgttcacgtc
cagcgctctggtcagcccctccccctcagcctgcagcaggccctccgatatctcaggagc
cagtgtctagaccaggtgggtctgttccgtaagtctggtgtgaagtctcgtatccaggcg
ctgaggcagatgaatgagtcgtctcctgatgatgtcagctacgaggaccagtcagcgtac
gacgtagcagacatggttaaacagttcttcagagacctgcctgaacctctactgaccagc
aagctgggagagaccttcctacacatctaccagtatgttcctaaggaccagcggttgcag
gctgtgcagacggccatcatgctgatgtcagacgagaacagggaggtgctccagatgctg
ctctgcttcctgtctgatgttacttcctctgtggaggagaaccagatgactcccatgaac
atcgctgtgtgtctggccccgtccctgttccacctcaacatcctgaagaaagacaacctc
tcacccagggccatgcagaggaagtacacaacaggacggcccgaccagaaggacctgaat
gagaaccttgccgcgacgcagggactcgcccacatgatcatcgagtgcaaccgactgttt
gagattccccacgagatggtgactcagtccaggaactcgtacgtggaggcggaccttcac
cctcccaccttagaggagctctgtagacagcaggaggaggacgatgcgtcctaccagaca
gaggccagaccctgccagacacactccgagaccagaccgcagaacctgtaccagagctac
gtagagagcaggctgcaggagctcctgaaggaggccagagagaaggctaagggctgggtg
tcctgcaccagctcagacaacactgagctctactgtaagaaggtgggtgatgggaaccct
ttgcggcagtggcgtgtggcggtggaagtagaggcccctccctcggttttgttgaaccgt
gtgctgcgagagcgccacctgtgggatgtggacctgctacagtggaaggtagctgagact
ctggacagacacactgaggtgttccactatgtcctcaaccgcatgcccccacaccccagc
agagacttcctggtcctacggtcgtggaggactgaccttcccaaggggacgtgcgcattg
gtgtgtgtgtctgtagaacatgaggactgtccccgggtcggtggggtgagggccgtggtt
ctagagtccaactaccttctagaaccctgcggctctgggaagtccagactcactcacatc
tgcagggtggacctcaaggggaggagtccagagtggtacaacaaggcctttggtcacctc
tgtgctgctgaagctgctcgtattcgcaactcctttcaaccaatcagcacagaggggcca
gagaccaagatctga
DBGET
integrated database retrieval system
