Oncorhynchus kisutch (coho salmon): 109904827
Help
Entry
109904827 CDS
T09179
Name
(RefSeq) LOW QUALITY PROTEIN: short transient receptor potential channel 4-like
KO
K04967
transient receptor potential cation channel subfamily C member 4
Organism
oki
Oncorhynchus kisutch (coho salmon)
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
oki04040
]
109904827
Ion channels [BR:
oki04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
109904827
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
TRP_2
Ank_2
Ank
Ank_4
Ank_3
PKD_channel
Ank_5
YVC1_C
Egg_lysin
BAR_4
CCDC22_CC
Motif
Other DBs
NCBI-GeneID:
109904827
NCBI-ProteinID:
XP_031646587
Ensembl:
ENSOKIG00005014754
LinkDB
All DBs
Position
LG15:complement(61876971..61896906)
Genome browser
AA seq
940 aa
AA seq
DB search
MSRLYYRRTDNSSYRDRIALRIVRAESELSVLEKNYLGAVEKGDYASVKQALEEAEIYFR
ININCIDPLGRTALLIAIENENLEIIELLLSFNVYVGDALLHAIRKEVVGAVEMLLNHKK
PSGEKQVPPILLDKQFSNFTPDITPIILAAHTNNYEIIKLLVQKGVSMPQPHEVRCNCME
CVSSSDVDSLRHSRSRLNIYKALASPSLLALSSEDPFLTAFQLSWELQELSKVENEFKSE
YEELSQQCKQFAKDLLDQTRSSRELELILNYRDDINPLLDENTNDLARLKLAIKYTQKEF
VAQPNCQQLLASRWYDEFPGWRRRHWAGKFLTCVFIGLLFPLLSLCYLVSPKSRYGHFIR
KPFIKFICHTTSYLTFLFLLLLASQHIVSTDPNRQGPPPTVVEWMILPWVLGFIWTEIKQ
MWDGGFQDYIHDWWNLMDFVMNSLYLATISLKFVAYVKYSGFRARNEWQMWHPTLVAEAV
FAIANIFSSIRLISLFTANSHLGPLQISLGRMLLDILKFLFIYCLVLLAFANGLNQLYFY
YETDEGLKGCKGIRCATQNNAFSTLFETLQSLFWSIFGLISLYVTNVEADHQFTEFVGAX
MFGTYNVISLVVLLNMLIAMMNNSYQHIADHADIEWKFARTKLWMSYFEEGGTLPSPFNI
IPSPKSIWYFICWIRKHIFKITRAKKTETFGTIGRRAALNVRTNHQYQEVLRNLVKRYVA
AMIRDAKTEEGLTEENFKELKQDISSFRYEVLGMMKGKVGPGGGGGALAESKPSEEAGAS
ILVYPDHSFKYSSKISPATPKTNMFPDTTSILQQRAALSSTSSTSPSTSQGLNRLVNGSV
VPSWASTDTSSNPTSSTPISSSSSTPISSSSSTPIHSSTKDRLARKDFPKDICDFGLYSV
SEEMGEVDLEELDCDGEKEEQGGARERTCTENEENKERGE
NT seq
2823 nt
NT seq
+upstream
nt +downstream
nt
atgtctcgactgtactacaggaggacagacaactcctcctacagggaccggatcgctctg
aggattgtcagggccgagtctgaactgtctgtcctggagaagaactacctgggagcagtg
gagaaaggagactacgcctcagtcaaacaggctctagaggaggcagagatctacttccgg
atcaacattaactgtatagacccgttgggccgcacagctctgctgatcgctattgagaat
gagaacctggagattatagagctgctgctcagctttaacgtgtacgtcggtgacgctctg
ctacacgccatccgtaaagaggtggtgggggccgtggaaatgctgctcaaccacaagaag
cccagcggggagaaacaggttcctcccatcctattggacaagcagttctctaactttact
cctgacatcacacccatcatcctggcagcacacaccaacaactatgagatcatcaaactg
ctggtgcagaagggggtgtccatgccccagccacatgaggtgcgctgtaactgcatggag
tgcgtgtccagctctgatgtggatagtcttcgacactcccgctcacgtctcaacatctac
aaggccctggccagcccatcactcctggccctctccagtgaagaccctttcctcacagcc
ttccagctctcctgggaactacaggaactcagcaaggtagagaatgagtttaagtcggag
tatgaggagttatctcagcagtgtaaacagtttgccaaggacctgttggaccaaaccaga
agttccagagaactagagctgatcctgaactacagagatgacatcaaccctctactggat
gagaacaccaacgatctggccagactcaaactggctatcaaatacacacagaaagagttt
gtagcccagcctaactgtcagcagctgcttgcgtctcgttggtacgatgagttccctggg
tggaggcgtcgtcactgggcagggaagttcctaacctgtgtcttcatcggcctcctcttc
cccctcttatccctctgctacctggtctctcctaagagccgctatggacacttcatcagg
aagcccttcatcaagtttatctgccacacaacgtcgtatctcaccttcctgttcctcctg
ctgctggcctcccagcacatcgtctctacagaccctaacagacaggggccgcctcctact
gtggtggaatggatgatactaccctgggtactgggcttcatctggacagagattaaacag
atgtgggatggagggttccaggactacatccatgactggtggaacctcatggactttgtt
atgaactctctgtacctggctaccatctctttgaagttcgttgcctatgtcaagtacagt
ggcttcagggccaggaacgaatggcagatgtggcatcctaccctggtagcagaggctgtg
tttgccatcgctaacatcttcagctccatccgcctcatctctctgtttacagctaactcc
cacctgggacctctacagatctctctgggcaggatgctgctggacatccttaagttcctg
tttatctactgcctggtgctcctggccttcgctaacgggctcaaccagctctacttctac
tacgagacagacgagggactgaagggatgcaagggcatccgctgcgcaacacagaacaat
gctttctcaacgttgtttgagacgctccagtctttgttctggtctatctttgggttgatc
agtctgtatgtgaccaacgtggaggcagaccaccagttcacagagtttgtaggggccnac
atgtttggaacctataatgtcatctctctggtggttctactcaacatgctgatcgccatg
atgaacaactcctaccaacacatcgctgatcatgcagacattgagtggaagtttgcaaga
accaagttgtggatgagttactttgaagagggggggactctgccttctccattcaacatc
atcccgagccccaagtcaatctggtacttcatctgctggatcaggaaacacatcttcaag
atcaccagggccaagaaaacagaaacatttggaaccatagggagacgggctgccttaaac
gtaagaacaaaccaccagtatcaggaggttttgaggaacctggtgaagagatatgtagca
gccatgatcagagatgccaagacagaggaaggactgactgaggagaactttaaggagctg
aagcaggacatctccagctttaggtatgaggtcctggggatgatgaaggggaaggtgggg
cccgggggtgggggcggggctctagcagaaagtaaacccagtgaagaggcaggggcctcc
attctggtctaccctgaccactccttcaagtactcctccaagatctccccagccacgcct
aagaccaacatgtttcccgacaccacatccatactccagcagagggcagccctctcctcc
acctcctccacatccccttccacctctcagggcttgaaccgactggtcaatggctctgtg
gtaccctcttgggcctccactgacacctcctccaaccccacctcctccactcccatctcc
tcttcctcctccactcccatctcctcttcctcctccactcccatccattcctccaccaaa
gacaggctggccaggaaagactttcccaaagacatctgtgactttgggctctactctgtg
tctgaggagatgggagaagttgacctggaggagctggactgtgatggagagaaggaggag
cagggtggagcgagggagaggacgtgtacagagaacgaagaaaacaaagagaggggagag
tga
DBGET
integrated database retrieval system
