Oncorhynchus kisutch (coho salmon): 109904933
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Entry
109904933 CDS
T09179
Name
(RefSeq) SR-related and CTD-associated factor 4-like isoform X2
KO
K13167
SR-related and CTD-associated factor 4
Organism
oki
Oncorhynchus kisutch (coho salmon)
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
oki03021
]
109904933
03041 Spliceosome [BR:
oki03041
]
109904933
Transcription machinery [BR:
oki03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
109904933
Spliceosome [BR:
oki03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
SR proteins
109904933
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CID
RRM_1
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
109904933
NCBI-ProteinID:
XP_020357619
Ensembl:
ENSOKIG00005042286
LinkDB
All DBs
Position
LG15:88275736..88339100
Genome browser
AA seq
858 aa
AA seq
DB search
MDSVNAFNLELFSMIDMKPPISRAKMMSVTKSAIKAIKLYKHVVQIVEKFIKKCKPELKV
PGLYVVDSIVRQSRHQFGVDKDVYGPRFQKNFTPTFQNLYLCPHDDKSKIIRVLNLWQKN
AVFEMDVVQPLLDMAAGSIVPTPSPQEDLQAQPQVPSASIASVQTPVSSASIAAALPQVS
RASIAAALPQLPPQLQNPEALAAVAQLFQSGQGHELQKILQRFQPGQQTPPVVPNTMADQ
NHPHVVQGQHNTHHPPLNTHQTHPTEQKNSLAKKLLDRFDYDDEPEEVKREETNPLVPGN
QYDGHFPGPMQPNMEQQFQGQPGRQQTPVGGYPGLNKGYSQSQHTDQGNSREREDPSGRR
EGRQRGHGRRSRSRSGSRSPRRKRSPGSPSRKPRHSSQRSGSRSRESRWNSPRSRSQERK
EREKDKDRRQKGLPSIKSQTLSVCTTTLWVGQLDKKTSQQDVMCLLEEFGQIDSINMIPP
RGCAYIVMVHRQDAYRALHKLGRGSFKVNQKAIKIAWALNKGIKATHKKFWDVERGVTYI
PWSKVKIEELEGSREGGMLDADTLCPEWGDDVKELTKPGGLNNGGGVDAMETEGAATAHV
QVPPVQPIGSVGGPPGPPTPSLTPGGPPSFLPTGFNPTQMPPGFPPPVVGGPRSTKDDSG
SKDKAGGSGGLSGPSDAPDSQLGAPGPGAVMSPPGPAVLLGPRMAMMTMQPRSGLQPPQL
QPPFAPHLPPPNMPPMMMGSRGPNPMFPPRGGPPGGFRMPMGHQSMEDFPHGPPRHPFQP
GPPRHPFQPGPPGEEGGNWEGGRHFRGERPGFGGHDRDWGRFGEQVRGFPRGGRGGGWSR
GGPEGRDRFMNRQDRFER
NT seq
2577 nt
NT seq
+upstream
nt +downstream
nt
atggattccgtcaacgctttcaacttggagttattctccatgattgacatgaagcctcca
atatcacgagcaaagatgatgtcagtcactaaatcagcaataaaggctatcaagctctac
aagcatgtcgtccagattgtggagaagttcatcaagaagtgtaagccagaactgaaggtt
cctggtttatacgtggtggattccattgtccgacagtcccgacatcagtttggagtggat
aaggacgtctatggacccaggttccaaaagaacttcaccccgacattccagaacctctac
ctctgtccacacgatgacaagagtaagatcatccgtgttctcaacctgtggcaaaagaac
gctgtatttgagatggacgtcgtccagcccctgttggatatggctgctggctccatagtc
cctactccctccccccaggaggacctccaggcccagccccaggtgcctagtgcctctata
gcatcagtccagaccccagtctccagtgcctccatagcagcagccctgccccaagtctcc
agggcctccatagcagcagccctgccccagctccccccacaactccagaaccccgaggcc
ctggctgccgtggcacagcttttccagtctggacagggacatgagcttcagaagatcctc
cagaggttccagccagggcaacagactccccctgtggttccaaacaccatggctgaccag
aaccacccacatgttgtccaaggccagcataatacacaccacccaccgttgaacacacac
cagacacatcctacggagcagaagaactcactagctaagaaactcctggaccgttttgat
tatgacgacgaaccagaagaagtgaagagagaggagacgaatccccttgttccagggaac
cagtacgatggccattttcctggtccgatgcagcccaacatggagcaacagtttcagggc
cagcctggaagacagcagacacctgttggaggataccctggtctgaacaagggctacagc
cagagccagcacactgaccagggaaactccagagaaagagaagacccgtctgggaggagg
gaggggagacagcggggtcacggcaggaggtcacgctccaggtctggctctcgttctccc
aggagaaagaggtcccccggttctccctcccggaaaccccgacattcctcccagcgctcc
gggtcccgctccagggagagtcgctggaactcccctcgttcccgctcgcaggagaggaag
gagagagagaaggacaaagaccgtagacagaaaggtctgcccagcatcaagagccagaca
ctcagtgtttgcaccacgactctgtgggtgggccagctagacaagaagacttctcagcag
gacgtcatgtgtttactagaggagtttgggcagatagactccatcaatatgatacctcct
cggggatgtgcctacatagtgatggtccacaggcaggatgcctacagagctctacacaaa
ctcggcagaggatccttcaaggtcaaccagaaggctatcaagattgcatgggccttgaac
aagggtataaaggcgacccataagaagttctgggacgtggagcgaggcgtcacctacatc
ccctggagcaaggtgaagatagaggagttggaggggtccagggagggaggcatgctggac
gcagacacactctgtccagagtggggagatgacgtgaaggagctgactaaaccaggagga
ctgaacaacggaggaggagtggatgccatggaaaccgagggagctgccaccgcccatgta
caggtgcctccagtccagccaatagggtctgtgggtggtccccctggccccccaaccccc
tctctcacccccggtggacccccttccttcctgcccactggcttcaaccccacacagatg
cctccaggtttccctccaccagtggtgggaggaccaaggagcaccaaagatgactcgggg
tctaaagacaaggctggagggagtggtggcctctctggcccctcagacgctccagacagc
cagctgggagctccagggccaggggccgtgatgagtcctccaggcccagcagtgttactg
ggtcccaggatggccatgatgaccatgcagcctcgttcaggactacaaccccctcaactc
cagcccccttttgcccctcacctccctccccccaacatgcccccaatgatgatgggctcc
aggggccccaaccccatgttcccccccagggggggccctccaggtgggttcaggatgccc
atgggccaccagtccatggaggactttcctcacggaccccccagacatcccttccagcct
ggaccccccagacatcccttccagcccggaccccccggggaagaaggtggcaactgggag
ggcgggagacacttcaggggcgagaggccagggttcgggggacatgacagggattggggg
aggtttggggagcaggtgagagggtttccgagaggaggaagaggagggggttggtccaga
ggtgggcctgaggggagggaccgcttcatgaaccgacaggatagatttgaacggtga
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