Oncorhynchus kisutch (coho salmon): 109904953
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Entry
109904953 CDS
T09179
Name
(RefSeq) ras GTPase-activating protein-binding protein 1
KO
K17265
Ras GTPase-activating protein-binding protein 1 [EC:
5.6.2.5
5.6.2.3
]
Organism
oki
Oncorhynchus kisutch (coho salmon)
Pathway
oki04623
Cytosolic DNA-sensing pathway
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09150 Organismal Systems
09151 Immune system
04623 Cytosolic DNA-sensing pathway
109904953
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oki03019
]
109904953
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
oki04147
]
109904953
Enzymes [BR:
oki01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
109904953
5.6.2.5 RNA 5'-3' helicase
109904953
Messenger RNA biogenesis [BR:
oki03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
109904953
Exosome [BR:
oki04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
109904953
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NTF2
RRM_1
RRM_7
NXF_NTF2
Motif
Other DBs
NCBI-GeneID:
109904953
NCBI-ProteinID:
XP_020357631
Ensembl:
ENSOKIG00005021535
UniProt:
A0A8C7H471
LinkDB
All DBs
Position
LG15:complement(9400490..9411181)
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AA seq
486 aa
AA seq
DB search
MVMEKPSAQLVGREFVRQYYTLLNQAPDYLHRFYGKNSSYVHGGLDNNGKPVEAVYGQSE
IHKIVLALNFRDCHTKIRHVDAHATLNEGVVVQVMGELSNDMQPMRKFMQTFVLAPEGTV
ANKFYVHNDVFRYQDEVFGDSDSEPPEESDEDVEEMEERVPSPEVNQEEAAAFYEQTPCT
EPEGLVEEEVAVTPEPEAEAEPDPDVVDGKPVLEPETQEQHTTEEQADKCPVSSPLPSAT
ADPAPAPAAEDNRPFSWASVTSKNLPPSGAVPVSGIPPHVVKVPLAPPRVEVKTEAAAQR
TQPRGDQRPREARPGPPPVNRGPRPGVREGEQGETSEVRRVVRYPDAHQLFVGNVPHDVD
KAELKEFFQQYGSVLELRINSGGKLPNFGFVVFDDFEPVQKILSNRPIKFRGDIRLNVEE
KKTRSAREGDRRDIRPRGPGGPGGPRERIGGPRGPPTRGGMTQKPSFGSGRGTGPSEGGR
YMGPRQ
NT seq
1461 nt
NT seq
+upstream
nt +downstream
nt
atggtgatggagaagccaagtgcccagctcgtcgggcgggagtttgtccgacagtactac
acactactcaaccaggcacctgactacctgcacaggttttatgggaagaactcttcctat
gtacacggaggtctggacaacaatggcaaaccagttgaagcggtctacggacagtcggag
atccataaaatagtgttggcgctgaactttcgtgactgccacaccaagatcagacacgtg
gacgcccatgcgaccttgaacgagggcgtggtggtgcaagtgatgggggagctgtccaac
gacatgcagcccatgcgcaaattcatgcagacattcgtgctggcccctgagggcactgta
gcaaacaagttctacgttcacaacgatgtattccgttaccaagacgaagtgtttggggat
tctgactcagaaccccctgaagagtctgatgaggatgtggaggagatggaggagagggta
ccatcaccagaggtgaaccaggaagaggctgcagccttctacgaacagacaccatgcacc
gagccagaggggctagtggaggaggaggtagctgtaaccccagagcctgaggcggaggcg
gagccagatccagacgtggtggatggaaaaccggtcctggagccagagacccaggagcaa
cacactacagaggagcaggcagataagtgtcctgtctcctcacccctgccctctgccact
gcagaccctgcccctgcacccgctgctgaagataaccggcctttctcctgggcctctgtc
accagtaagaaccttccccctagtggcgctgtccccgtctctggcatccccccccacgtt
gtcaaagtccccttggcaccgcccagggtggaggtgaaaacagaagccgcagcacagaga
acacaaccgagaggagaccagagaccacgggaagcaaggccaggccccccaccagtcaac
agaggaccccgaccaggagtgcgggaaggagagcagggagagacgtcggaggttcgccgt
gtggtgaggtatccagacgctcaccagctctttgtaggaaacgtcccccatgatgtggac
aaagcagagctcaaggagtttttccagcagtatggttctgtgcttgagctacggatcaac
agcggagggaagctgcccaactttggatttgtggtgtttgacgattttgaacctgtacag
aaaatcctaagcaaccggcccattaagttcagaggagacatccgactgaacgtggaggaa
aagaagactcgctccgcccgggaaggggaccggcgagacatccgccccagaggtccaggt
ggccccggagggccccgggagaggataggagggcccagaggcccccccaccaggggtggc
atgacacagaaacccagctttggctctggacgaggtactggacccagtgaaggaggtcgc
tacatgggacctcgtcagtga
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