KEGG   Oncorhynchus kisutch (coho salmon): 109904961
Entry
109904961         CDS       T09179                                 
Name
(RefSeq) caltractin
  KO
K10840  centrin-2
Organism
oki  Oncorhynchus kisutch (coho salmon)
Pathway
oki03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:oki00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    109904961
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:oki03019]
    109904961
   03036 Chromosome and associated proteins [BR:oki03036]
    109904961
   03400 DNA repair and recombination proteins [BR:oki03400]
    109904961
Messenger RNA biogenesis [BR:oki03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    TREX-2 complex
     109904961
Chromosome and associated proteins [BR:oki03036]
 Eukaryotic type
  Centrosome formation proteins
   Centriole proteins
    109904961
   Centrosome duplication proteins
    Centriole replication proteins
     109904961
DNA repair and recombination proteins [BR:oki03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     XPC-HR23B-CETN2 complex
      109904961
SSDB
Motif
Pfam: EF-hand_7 EF-hand_1 EF-hand_6 EF-hand_8 EF-hand_9 AIF-1 EF-hand_5 EF_EFCAB10_C EH Dockerin_1 SUB1_ProdP9 DUF7645 SurA_N_3 TerB LETM1_RBD DUF7390 MgtE_N SRI MJ1010-like_2nd
Other DBs
NCBI-GeneID: 109904961
NCBI-ProteinID: XP_020357638
Ensembl: ENSOKIG00005035182
LinkDB
Position
LG15:12089853..12095963
AA seq 173 aa
MATSVKRQSLGPVPPPRKKSGPKSELTEELKQEIREAFELFETDASGHIEVKELKVAMRA
LGFEPKKEEIKRMITEADKDGTGKISFSDFLTVMTQKMAEKDSKEEILKAFRLFDDDETG
KISFRNLKRVAKELGENLTDEELQEMIEEADRDGDGEVNQGEFLRIMKKTSLY
NT seq 522 nt   +upstreamnt  +downstreamnt
atggcaaccagcgtaaagaggcagtccctaggtccggtccctccccccaggaagaagtcc
ggccccaagtcagagctcactgaggagctgaaacaggagatcagagaggcctttgaactg
ttcgaaaccgacgcctccggacacattgaagtcaaggagctaaaggttgctatgagggcg
ctggggtttgagccgaagaaagaggagattaagaggatgataacagaggcggataaggac
ggaacaggaaagatctccttctctgattttctcactgtcatgactcagaagatggctgag
aaggattctaaggaggagatcctgaaagcattccgtctgtttgatgatgatgagacgggg
aagatctccttcaggaacctgaagagggtcgccaaggaactaggagagaacctgactgac
gaggaactgcaggagatgatcgaggaggcagacagggatggagatggagaggtgaaccag
ggagagttcctccgcatcatgaagaagaccagcctgtactga

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