Oncorhynchus kisutch (coho salmon): 109904961
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Entry
109904961 CDS
T09179
Name
(RefSeq) caltractin
KO
K10840
centrin-2
Organism
oki
Oncorhynchus kisutch (coho salmon)
Pathway
oki03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
109904961
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oki03019
]
109904961
03036 Chromosome and associated proteins [BR:
oki03036
]
109904961
03400 DNA repair and recombination proteins [BR:
oki03400
]
109904961
Messenger RNA biogenesis [BR:
oki03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX-2 complex
109904961
Chromosome and associated proteins [BR:
oki03036
]
Eukaryotic type
Centrosome formation proteins
Centriole proteins
109904961
Centrosome duplication proteins
Centriole replication proteins
109904961
DNA repair and recombination proteins [BR:
oki03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
XPC-HR23B-CETN2 complex
109904961
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EF-hand_7
EF-hand_1
EF-hand_6
EF-hand_8
EF-hand_9
AIF-1
EF-hand_5
EF_EFCAB10_C
EH
Dockerin_1
SUB1_ProdP9
DUF7645
SurA_N_3
TerB
LETM1_RBD
DUF7390
MgtE_N
SRI
MJ1010-like_2nd
Motif
Other DBs
NCBI-GeneID:
109904961
NCBI-ProteinID:
XP_020357638
Ensembl:
ENSOKIG00005035182
LinkDB
All DBs
Position
LG15:12089853..12095963
Genome browser
AA seq
173 aa
AA seq
DB search
MATSVKRQSLGPVPPPRKKSGPKSELTEELKQEIREAFELFETDASGHIEVKELKVAMRA
LGFEPKKEEIKRMITEADKDGTGKISFSDFLTVMTQKMAEKDSKEEILKAFRLFDDDETG
KISFRNLKRVAKELGENLTDEELQEMIEEADRDGDGEVNQGEFLRIMKKTSLY
NT seq
522 nt
NT seq
+upstream
nt +downstream
nt
atggcaaccagcgtaaagaggcagtccctaggtccggtccctccccccaggaagaagtcc
ggccccaagtcagagctcactgaggagctgaaacaggagatcagagaggcctttgaactg
ttcgaaaccgacgcctccggacacattgaagtcaaggagctaaaggttgctatgagggcg
ctggggtttgagccgaagaaagaggagattaagaggatgataacagaggcggataaggac
ggaacaggaaagatctccttctctgattttctcactgtcatgactcagaagatggctgag
aaggattctaaggaggagatcctgaaagcattccgtctgtttgatgatgatgagacgggg
aagatctccttcaggaacctgaagagggtcgccaaggaactaggagagaacctgactgac
gaggaactgcaggagatgatcgaggaggcagacagggatggagatggagaggtgaaccag
ggagagttcctccgcatcatgaagaagaccagcctgtactga
DBGET
integrated database retrieval system