Oncorhynchus kisutch (coho salmon): 109905106
Help
Entry
109905106 CDS
T09179
Name
(RefSeq) nuclear factor NF-kappa-B p105 subunit
KO
K02580
nuclear factor NF-kappa-B p105 subunit
Organism
oki
Oncorhynchus kisutch (coho salmon)
Pathway
oki04010
MAPK signaling pathway
oki04210
Apoptosis
oki04218
Cellular senescence
oki04620
Toll-like receptor signaling pathway
oki04621
NOD-like receptor signaling pathway
oki04622
RIG-I-like receptor signaling pathway
oki04623
Cytosolic DNA-sensing pathway
oki04625
C-type lectin receptor signaling pathway
oki04920
Adipocytokine signaling pathway
oki05132
Salmonella infection
oki05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
109905106
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
109905106
04218 Cellular senescence
109905106
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
109905106
04621 NOD-like receptor signaling pathway
109905106
04622 RIG-I-like receptor signaling pathway
109905106
04623 Cytosolic DNA-sensing pathway
109905106
04625 C-type lectin receptor signaling pathway
109905106
09152 Endocrine system
04920 Adipocytokine signaling pathway
109905106
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
109905106
09171 Infectious disease: bacterial
05132 Salmonella infection
109905106
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
oki03000
]
109905106
Transcription factors [BR:
oki03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
RHR (Rel homology region) Rel/Ankyrin
109905106
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RHD_DNA_bind
RHD_dimer
Ank_2
Ank
Ank_3
Ank_4
Ank_5
Death
Motif
Other DBs
NCBI-GeneID:
109905106
NCBI-ProteinID:
XP_020357872
Ensembl:
ENSOKIG00005007543
UniProt:
A0A8C7D6S5
LinkDB
All DBs
Position
LG15:complement(29076946..29099880)
Genome browser
AA seq
928 aa
AA seq
DB search
MAEEEPYLPHQPYNFDIDPLWDPLNFPPMSHSNSLRTVTADGPYLQIIEQPKQRGFRFRY
GCEGPSHGGLPGASSEKNRKSYPNIKICNYQGMARVVVQLVTNSKDAHLHAHSLVGKQCD
KGICIADLQPKDSSISFPNLGILHVTKKNVSKTLEDRMSEAYRMGYNCGIVIHPEMDAFQ
GEFRIPRELTDHQRNLISSAASYQAKEMDLSVVRLMFTAFLPDSDGGFSRRLDPVISDPI
FDSKAPNASNLKIVRMDRTAGCVTGGEEVYLLCDKVQKDDIQVRFYEDDETGLTWEAFGD
FSPTDVHRQFAIVFKTPKYRDLNLQKPTSVFVQLKRKSDNETSEPKPFTYHPQIIDKEEV
QRKRQKTLPNFQDYSGHGGAGGLYRGPGGGGPATGGGGGFFQGYSTYNNYGTSYNSGFSP
GMSGGGAGIKHAPQGRAEDSGDDSDMDDDPASGTVVGVRAKSEDASAGETSEESGAGVEL
GPGDRTGECVLVARLVDVAERQAEALFQYAVTGDVSYLLAPQRQLMTAQDENGDTGLHLG
VIHSQTDAVRSLAQVLSALPGEEVLNMRNNLYQTPLHIAVITQQKAAAEALLLAGADVTL
CDRHGNTALHLAAQQKEGGMVGFLLRHREIVELVDLPNTAGLCSLHLAVLANSLCSLRDL
LVNGGSVEVQERSCGRTALHLATELDNVSLAGCLLLEGNADVDCCTYNGSSPLHTATGRG
SVKLTALLMAAGADPHKENFEPLFFREHDCCVDEEEEEEDEGYIPGTTPLNMAATPEVLE
ILNGKEYKPETNAFVFVPPQGDMQSLGSDTKRALCQALECPEDGWEMLAHILGLGILNSA
FRLSSSPASTLLDSYEVSGGKVKDLLEGLRTVGNCSALTVLEGALRETEQAPPAPQSTTK
LLERVCDLKLDGWEDSGVCDSGVELSTA
NT seq
2787 nt
NT seq
+upstream
nt +downstream
nt
atggcagaagaggagccttacctacctcaccaaccgtacaactttgacatagatccacta
tgggatcccctgaatttccctcccatgtcacactccaactcactccggacagttacagca
gatgggccctacctccaaatcattgaacagcctaaacagcggggcttcaggtttcgttat
ggctgtgagggaccttctcacggcgggctaccaggggcctctagtgagaagaacagaaag
tcctatcccaatatcaagatctgtaactatcaggggatggcacgtgtggtggtacagctg
gtgaccaactctaaagatgcccacctccatgcccacagtctggtgggcaagcagtgtgac
aagggcatctgcatcgcagacctacagccaaaagactccagcatcagtttccccaacttg
ggcatcctccacgtgaccaagaagaacgtgagtaagacgctggaggaccgtatgtctgag
gcctacaggatgggctacaactgcggtatcgtcatccatcccgagatggacgccttccag
ggagagttccgcatcccccgagagctcactgatcaccagagaaatctgatcagcagcgca
gcgtcctaccaggctaaagagatggacctgagcgtggtgcgcctcatgttcacagccttc
ctcccagacagtgacgggggcttctcccgtagactggaccccgtcatatcagaccccatc
ttcgacagcaaagctccaaatgcatctaacctgaagatagtgcggatggaccgaacagct
ggctgtgtgacgggaggagaggaggtctacctgctctgtgacaaggttcagaaagatgac
atccaggtgcgcttctatgaggatgacgagacagggctgacatgggaggcctttggggac
ttctcccccaccgatgtccaccgacagtttgccattgttttcaagacccccaaatacaga
gacctgaacctccagaaacccacctcggtgtttgtgcagctgaagcgtaaatcggacaat
gagacgagcgagcccaagcccttcacataccatccgcagatcatagataaggaagaagtg
cagaggaagagacagaagaccctgcctaacttccaggactacagtggccacggtggagca
gggggcctgtaccggggaccagggggggggggtcccgctacagggggaggaggaggtttc
ttccagggctattccacctacaataattatggcaccagctacaactctggcttttcccct
ggcatgagtggtggcggggcaggaattaaacatgctccacaaggcagagcggaggacagt
ggtgatgacagtgacatggatgatgacccggcctcagggacagtggtgggggtccgagcc
aagtcagaggatgcctcggctggggagacgagtgaggagagcggggccggtgtggagcta
ggaccaggggacaggactggagagtgtgtgctggtggccaggctggtggatgttgctgag
aggcaggctgaagccctcttccagtacgccgtcactggtgacgtcagctacctgctggct
ccacagcgccagctcatgactgctcaggacgagaacggtgacactggtctccatctgggg
gtgatccacagccagacagacgcagtcaggagtctagcccaggtcctctctgccctgcct
ggagaggaggtccttaacatgagaaacaacctctaccagactcctttgcacatagcggtg
ataacacagcagaaggcggcagctgaggccctcttattggctggggctgatgtcacactg
tgtgatcgccacggaaacacagctcttcacctggccgcccagcagaaggagggaggtatg
gtgggatttctactgagacacagagagatagtggaactagtggacctccccaacacagca
ggactgtgctccctccacctggctgtgcttgccaacagcctgtgttccctcagggacctc
ctggtgaacgggggcagtgtggaggtccaggagaggagctgtggccgcacggcgctccat
ctggccactgagctggacaacgtctccctggcaggctgcctgctactggaggggaatgct
gatgtggactgctgcacctacaacggttccagccctctccatacagccacagggcggggc
tctgtcaagctgaccgctctcctcatggctgcaggtgccgatcctcacaaagaaaacttt
gagcccctgttcttcagagagcatgactgctgtgtggatgaggaagaggaggaggaggac
gaaggctacatcccagggacaactcctctcaacatggctgccactcctgaggtgttggaa
atcttgaatggaaaagagtacaagcccgagaccaacgccttcgtcttcgtcccccctcaa
ggtgacatgcagagcctgggctcagacacaaagcgggcactatgccaggctctggagtgc
ccggaggatggctgggagatgctggcacacatactgggcctgggcatcctcaacagtgcc
ttcagactcagctcctcccccgcaagcacgctgctggacagctacgaggtgtctggagga
aaggtcaaggaccttttggagggactcaggactgtagggaactgctctgctttgacagta
ctggagggggcactgcgtgaaacagaacaggctccaccagccccccaaagcaccacaaaa
ctcttagaacgtgtgtgtgatctgaagctggacggatgggaggacagcggagtgtgtgac
agtggggtggagctctccacagcgtga
DBGET
integrated database retrieval system
