Oncorhynchus kisutch (coho salmon): 109905191
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Entry
109905191 CDS
T09179
Name
(RefSeq) protocadherin-10-like isoform X3
KO
K16499
protocadherin delta 2
Organism
oki
Oncorhynchus kisutch (coho salmon)
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
oki04515
]
109905191
Cell adhesion molecules [BR:
oki04515
]
Cadherins
Protocadherins
109905191
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
Cadherin_CELSR2_9th
Motif
Other DBs
NCBI-GeneID:
109905191
NCBI-ProteinID:
XP_020358012
Ensembl:
ENSOKIG00005008468
UniProt:
A0A8C7F7N6
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Position
LG15:complement(32708462..32720984)
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AA seq
959 aa
AA seq
DB search
MIVLFLLLCITNGVVSQIRYSVPEEADHGTFVGNIAEDLGLDMTKIASRRFQVVPSSRTP
YLEVNMENGILFVNERIDREQICKQSASCLLHLEVFLENPLELFRVEIEVVDINDNPPSF
PETDITVEISESATPGTRFPLESAFDPDVGSNALRTYDITTNNYFYLDVQTQTDGNKFAE
LVLEKPLDREQQAAHRYVLTAVDGGQPPRTGTALLVVKVLDSNDNVPVFDQPVYSVSLQE
NAPVGTLVIQLNATDLDEGQNGEIVYSFSNHISSRVKDLFAIDARTGRIEVCGEVDFEES
SLYQIFVQAKDLGPNAVAAHCKVLVKVTDVNDNAPEITFSTVTESVSERAAPGTVIALLS
VTDKDAEENGKIHVEILGDVPFKLKPSFRNYFTIVTDGPLNRENADSYSVTVVAKDTGTP
SLATSKSIKVQVSDENDNAPTFTQPIYDVYVTENNVPGAYIHAVTALDPDVGQNALISYS
IMDCDIQGMSVKTYVSINEETGYLYALRSFDYEQLKDFTFMVKAKDAGSPELSSNATVKV
IIVDQNDNPPSVIAPLGKNGTAREPLPRSAEPGYLVTRIVAMDADDGENARLSYSIQRGN
ENGMFRMDWRTGELRTARRVSTKRDPNQMYDLLIEVRDHGQPPLSSTASVFVVLVDSVVE
DHRERGTAKSKETTLDLTLILIIALGSVSFIFLLAMIVLAVRCQKDKKLNIYTCLTSDCC
LGCATCCSRHARARKKKLSKSDIMLVQSANVTGAGTAQVPVEESGSFGSHHQNQNYCYQV
CLTPESAKTDLMFLKPCSPSRSTDTEHNPCGAIVTGYTDQQPDIISNGSILSSETKHQRA
ELSYLVDRPRRVNSSAFQEADLVSSKDSGHGDSEQGDSDHDATNRGHSTGADLFSNCTEE
CKALGHSDRCWMPSFVPSDGRQAADYRSNLHVPGMDSVPDTERGKGFASSFRVDIPETA
NT seq
2880 nt
NT seq
+upstream
nt +downstream
nt
atgattgtgctattccttcttctgtgtattacgaatggagtggtctcgcagatacgctac
tctgtgccggaggaggcggatcacggcaccttcgtggggaatatcgccgaggaccttgga
ctggacatgaccaaaatcgcctcgcggcgcttccaggtggtgcctagctcgcggacgccg
tacctggaagtgaacatggagaacgggattctgttcgtcaacgaaagaattgaccgggag
cagatctgtaagcagagtgccagctgcctattacaccttgaagtgtttctggagaaccca
ctcgagctgttccgcgtggagatagaggtcgtggatataaatgacaatccgcccagcttc
cccgagaccgacatcacagtggagatttcagagagcgctacccccggtacccggttccct
cttgagagtgcattcgatccggacgtgggctccaatgcgctgcgcacatacgacatcacc
accaataactacttctacctggatgtgcagacgcagactgacgggaacaaattcgcagag
ctggtgctggagaagccgctggacagggagcagcaggcggcccacaggtacgtgctaact
gcggtggacggggggcagcctccacggacaggcactgctctgctggtggtcaaagtgctg
gattctaacgacaacgtgcccgtgtttgaccagccggtgtattcggtgagccttcaggag
aacgcaccggtggggaccctcgttattcaactgaacgccaccgacttggacgaggggcag
aacggggagatagtgtattcattcagcaaccacatatccagccgcgtcaaggatctgttc
gccatagatgcgcgcactggacgcatcgaggtgtgcggcgaggtggattttgaggagagc
agtttatatcaaatattcgttcaggcgaaagatcttggacccaatgccgtggctgcacac
tgtaaagtcctggtgaaagtgacagacgtaaatgacaatgctcctgagatcacctttagc
accgtgactgagtcggtgagtgagagggcagccccaggaaccgttatagccctgctgagc
gtaacggacaaagatgccgaggaaaacggaaagattcatgttgaaatcctcggcgatgtc
ccgttcaaactcaaaccctccttcaggaactatttcaccattgtaacagacggacctcta
aatagggagaatgccgactcttattcagtgactgtagttgccaaggatacagggacccct
tccctcgcaaccagtaaatcaatcaaagtgcaagtctcggatgaaaatgacaatgcgcca
acgtttacacagcccatatatgatgtgtatgtgactgaaaacaatgtgccaggtgcttat
atccacgctgtgaccgctctggacccagacgttggacagaacgctctcattagttactcc
ataatggattgtgatattcagggtatgtctgtgaaaacatatgtgtcaatcaatgaggaa
acgggctacctttacgcactcagatcattcgattacgagcagcttaaagacttcactttc
atggttaaggcgaaagatgcaggtagccccgagctctcctcgaacgccacggtcaaagtg
atcatcgtagaccagaatgacaaccctccctcagtcattgctcctctgggtaaaaatggc
actgcgagagagccgctgccccgctccgcagagcctggctacctggtgacccgtatcgtc
gccatggacgcagatgacggcgagaacgcacggctctcctacagcatccagagggggaac
gagaacggcatgttccgtatggactggaggacaggagagctgcgcactgcccggcgcgtc
tcaaccaagcgggaccccaaccagatgtatgacctgttgatagaggtgagggaccacggc
cagccacccctctcctccaccgccagtgtgttcgtggtgctggtggacagcgtggtggag
gaccaccgggagaggggcaccgccaagtccaaggagaccactctggacctcaccctcatc
ctcatcatcgccctgggctctgtctccttcatcttcctcctggctatgatcgtgctggcg
gtgcgctgccagaaggacaaaaagcttaatatctacacgtgcctcaccagtgattgttgc
ctcgggtgcgccacatgctgcagcaggcatgcgcgagcccgcaagaaaaagctcagcaag
tctgatatcatgctggtgcagagcgccaacgtcaccggggccggtacagcccaggtgcca
gtggaagagtccgggagcttcggctctcaccaccaaaaccagaactattgctaccaggta
tgtctgactccggagtctgccaaaaccgacctcatgttcctaaagccgtgtagcccatct
aggagcacagacaccgaacacaacccgtgcggggccatagtgacagggtacactgaccag
caacctgacatcatatcaaacggcagcattttatcaagcgagaccaaacatcagcgagcg
gaactcagttacctggtggacagacctcggcgtgtgaacagttcggctttccaagaagcg
gatctcgttagctcgaaagacagtggtcacggtgacagcgaacagggcgacagtgaccat
gacgccaccaatcgaggtcactctaccggcgctgatctcttctctaactgcacagaggag
tgcaaggctctgggccactccgaccgctgctggatgccctcctttgtgccctccgacggg
cggcaggcggcagactaccgcagcaacctgcacgtgccaggcatggactccgtgcccgac
actgagcgaggaaaagggtttgctagctcctttcgcgtggacataccagagaccgcatga
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