KEGG   Oncorhynchus kisutch (coho salmon): 109905229
Entry
109905229         CDS       T09179                                 
Name
(RefSeq) elongator complex protein 1-like
  KO
K11373  elongator complex protein 1
Organism
oki  Oncorhynchus kisutch (coho salmon)
Brite
KEGG Orthology (KO) [BR:oki00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:oki03016]
    109905229
Transfer RNA biogenesis [BR:oki03016]
 Eukaryotic type
  tRNA modification factors
   Elongator complex
    109905229
SSDB
Motif
Pfam: Beta-prop_ELP1_1st A-sol_ELP1 HB_ELP1 Beta-prop_ELP1_2nd TPR_ELP1 Beta-prop_WDR19_1st Beta-prop_EML_2 Beta-prop_WDR35_TULP_N Beta-prop_NUP159_NUP214 TPR_GEMI5 B-prop_COPA_B_2nd TPR_9
Other DBs
NCBI-GeneID: 109905229
NCBI-ProteinID: XP_020358086
Ensembl: ENSOKIG00005022302
LinkDB
Position
LG15:34235866..34252297
AA seq 1322 aa
MRNLRLLKSLRCLKLQGPGTPQCFTVRTDTGTLLIASEYSVTELDTRAGQVVNEVSLTVE
RYLPEDGGGTVVGIQDLPDQESVCVATATGDVILYNLNTNQLECVGSVDSGLSAMSWSPD
QELVTLTTGQDTIIMMTKNFEPITEVGIHQDDFGEGKFITVGWGKKETQFHGSEGKHAAQ
RKTIEVQPAMSWDDRRPRVTWRGDGQLFAVSSVCPLTGARKVRVWNRECVLQSTSETVNG
LEQSLCWKPSGSLIAATQRHPNKHSVVFMEKNGLLHGDFTLPFGKEQVKVKELLWNSDST
VLAVWLEDMTPGEGGQVNTYIQLWTVGNYHWYLKQNLYFGSNPQRAPAYVSWDPERPLRL
HLVTRGWVSLNYDWGWSTDRSHGEDGHDNANVAVIDGDKLLVSTFRQCVVPPPMCAYDLQ
LPAPVNLVTFQRQRTNELAALTADGHISVYGQGTEKLSEPAAGLGGFRSVTHAPQLKTTY
RVAVDQEEPLALRLLLWLREDVFLGVGACTDGPSQSNMLILGPSEAQGPQPTLEIRSHVE
VEGHVISMCHSSKTGTVALQLEDGQIRKFLWDSLKPSVVEWQDSTGCRINFPDPCVQTAL
FTIEEEHLLGLTDRSHLFVGETEVASNVSSFVVYDDFLLLTTHSHTCRCFRLTTLTVKGL
QVALAADGGQNQNDQNDETLRRIERGSRIVTVVPQDTRLILQMPRGNLETIRHRALVLAQ
LRKWLDSQRFREAFECMRKLRINLNLIYDHNPKVFLESVETFLRQLDSINHINLFLTELK
EEDTTTTMYPCPVNTTGQSAPAACGKKVDIVCDALRCTMESMDQHKYCLSILTSHVKKTV
PELEVALQKVHELRVNPTSAANAVSAEEALKYLLFLVNVNELYEHSLGTYDFDLVLMVAE
KSQKDPKEYLPFLNMLKTLEPNYQRYSIDKHLKRYRKALHHLSKCGEEHFTESLNLVKDQ
RLYSEALGLYPTDSPQYKALSCAYAEYLVEQQQAEQAGLLLWRCGEATRALQAFVGSASW
RNALCVAEQIPLPSDQLALLARDLAEKLIELRRYTEAAILLERYAKDCEEAISALITGAV
WEEALRLVYLYNRQDIIETNFKPALLEACSSQASYLEAQKAMFTRHKTRLSVVRELKEKA
RLELLDEDVPDCPEAELYSEASSVMTGSHAGSKYSHSNSRISSRSSKNRRKAERKKLSLK
EGTPLEDMALLHALAEIIHSVDKMREEVHSLLKALVLFQFDGQAGRLQHAYGEALQMIEV
ALPEVWQEGLQQTQAPITGPNSTANSIMASFQQPRPSATQDSETPPTPKMRNGVKWKLSI
LK
NT seq 3969 nt   +upstreamnt  +downstreamnt
atgcgcaacttgaggttgctgaagagccttcgttgcttgaagctgcaaggcccgggcacg
ccgcaatgtttcactgttcggacggacacaggcaccttgctcatcgcttcagaatactcc
gtcacagagttggacacacgagctggccaggtggtgaatgaggtgtcgttgacagttgag
cgctatcttccagaggatggcggtgggacagttgttggtatccaagacttaccagaccag
gagtctgtgtgtgtggcaacagccactggtgatgtcattctctacaatctcaacactaac
cagctggagtgtgtgggcagtgtggacagtggtctgtcagccatgagctggagcccggac
caggagctggtcactctcaccactggtcaggacaccattatcatgatgaccaaaaacttt
gaacccatcacagaggttgggatccatcaggatgactttggagaggggaagtttatcaca
gtgggctgggggaagaaagagacacagttccatggctcagagggaaagcacgctgcccag
aggaagactatagaggtgcagccggccatgtcgtgggacgaccgcaggccgagggtgacg
tggagaggagacgggcagctcttcgctgtgagctcagtttgccccctgactggtgccagg
aaggtcagagtgtggaacagagagtgtgtcttacagtcgacaagtgaaaccgtcaacggt
ctggagcagtcactgtgttggaaaccgtcaggtagtttgatagcggccacacagcgtcat
cctaacaagcacagtgtggtgtttatggagaagaacggcctcctacacggcgacttcacc
ctgccctttggcaaagaacaggtcaaggtgaaggagctgctatggaacagtgactcgact
gtgttggctgtgtggctggaggacatgacaccgggagaggggggtcaagtcaacacatac
attcagctgtggacagtaggtaactaccactggtacctgaagcagaacctgtacttcggc
agcaacccccagagggcaccagcctacgtgagctgggatcctgagaggcccctgcggctg
caccttgtgacccgaggctgggtcagcctgaactacgactggggctggagcaccgaccgc
agccacggggaggacgggcatgacaacgccaacgtggccgtgatcgacggcgacaagctc
ctcgtgtcaacgtttcgtcagtgtgtggtgcccccgcccatgtgtgcctacgaccttcag
ctgcccgcccccgtcaacctggtgaccttccagcgccagaggaccaatgagctggcagcg
ctcacagccgacggacacatctctgtctacggccaaggtactgagaaactgagtgagcct
gcagctggattgggaggattccgatctgtcacacacgcccctcagctaaagacaacctac
agggttgcggtggatcaggaggaacccctggctctgcgtctgctgctgtggctgagagag
gatgtgttcctgggggtgggggcctgtacagacgggccgtcccagtccaatatgctcatc
ctgggaccctcagaggcccagggcccccagccaaccctggagatcaggtcacatgtggag
gttgaaggtcacgtgatcagcatgtgtcacagctccaagacgggcacggtggcgctgcag
ctggaggacggccagatcaggaagttcctctgggactctttgaaacctagtgtggtggag
tggcaggactcaacaggctgcagaatcaacttcccagatccctgtgtgcagacggccctc
tttaccatagaagaggagcatctgttagggcttacggaccgatctcacctgtttgttggt
gagacagaggtggcctccaacgtttcctccttcgtggtctacgacgacttcctgctgctc
accacacactcgcacacttgccgctgcttccgactcaccacgctcactgtcaaagggctg
caggtggccttggctgccgacggaggtcagaatcagaatgaccagaatgacgagactctc
cgcaggatagagaggggctccagaatcgtcactgtggtcccccaggacaccaggctcatc
ctacagatgcctcgcggtaacctggagaccatccgccatcgagcactggtgttggctcag
ctccgaaagtggctggacagtcagaggttccgagaggcctttgagtgcatgaggaagctg
cggatcaacctcaacctgatctacgaccacaaccccaaggtgtttttagagagcgtggag
actttcctgagacagctggactctatcaatcacatcaacctgttcctcacagagctcaag
gaggaagataccactacaacaatgtacccttgtccagtgaacactacaggacagtcagcc
cctgcggcttgtgggaaaaaggtggatattgtctgtgatgcgttacgctgcaccatggaa
tctatggaccagcataagtactgtctgtctattttgacgtcacacgtgaagaagactgtt
cctgagctggaggttgccctgcagaaagtccacgagcttcgagtgaacccaaccagtgct
gccaacgcagtgagtgcggaggaggctctgaagtacctcttgttcttggtcaatgtcaac
gagctgtatgaacactctctgggcacctacgactttgacttggtcctcatggtggccgag
aagtcccaaaaggaccccaaagagtaccttcccttcctgaacatgctgaagactctagag
cccaactaccagcgctattccatcgacaaacacctcaagagatacaggaaggccttgcat
cacctcagcaagtgtggtgaggagcacttcaccgagtccctgaatctggtgaaggaccag
aggctgtatagtgaagccctgggtctctacccaacagacagccctcagtacaaggcgctg
agctgtgcctacgccgagtacctggtggagcagcagcaggcggagcaggcagggttgttg
ctgtggcgctgcggcgaggcgacccgcgccctccaggcctttgtgggcagtgccagctgg
aggaacgccctctgtgtggcagagcagatccccctgccatccgaccagctggcattgctg
gccagggacctggcagagaaactgatagagctcagaagatatacggaggcggccatattg
ttggagcggtatgccaaggactgtgaggaggccatctcagctctgatcacaggtgcagtc
tgggaagaagcacttcgattggtgtatttgtacaacagacaagacataattgaaacgaac
ttcaaaccagctctcttggaagcatgtagttctcaggcctcttacctggaagctcagaag
gcgatgttcactcgtcacaaaacccgtctgtccgtggtacgggagcttaaggaaaaagcc
aggctggagttactggatgaggatgtcccagactgtccggaggcagagctctactcagag
gccagtagtgtgatgacaggcagccatgctggctccaagtactcgcatagtaactcccgc
atctcctcgaggtcgtctaagaatcgccggaaggccgagcgcaagaagctgagtctgaag
gaagggacccccctagaggacatggccctgctgcatgccctggcagagatcatccactct
gtggacaagatgagagaagaggtgcacagcctgctgaaggccctggtgctgttccagttt
gacggacaggcggggaggttgcaacatgcctatggggaggctctccagatgatagaggtg
gcccttcccgaggtgtggcaggagggtcttcagcagacccaggcaccgatcacaggtcct
aactccacagccaacagcatcatggcttcatttcaacagccaagaccctcagcaacccaa
gattcagagaccccaccaaccccaaaaatgagaaatggtgtcaagtggaagctgagtatt
ctgaagtag

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