Oncorhynchus kisutch (coho salmon): 109905229
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Entry
109905229 CDS
T09179
Name
(RefSeq) elongator complex protein 1-like
KO
K11373
elongator complex protein 1
Organism
oki
Oncorhynchus kisutch (coho salmon)
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
oki03016
]
109905229
Transfer RNA biogenesis [BR:
oki03016
]
Eukaryotic type
tRNA modification factors
Elongator complex
109905229
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_ELP1_1st
A-sol_ELP1
HB_ELP1
Beta-prop_ELP1_2nd
TPR_ELP1
Beta-prop_WDR19_1st
Beta-prop_EML_2
Beta-prop_WDR35_TULP_N
Beta-prop_NUP159_NUP214
TPR_GEMI5
B-prop_COPA_B_2nd
TPR_9
Motif
Other DBs
NCBI-GeneID:
109905229
NCBI-ProteinID:
XP_020358086
Ensembl:
ENSOKIG00005022302
LinkDB
All DBs
Position
LG15:34235866..34252297
Genome browser
AA seq
1322 aa
AA seq
DB search
MRNLRLLKSLRCLKLQGPGTPQCFTVRTDTGTLLIASEYSVTELDTRAGQVVNEVSLTVE
RYLPEDGGGTVVGIQDLPDQESVCVATATGDVILYNLNTNQLECVGSVDSGLSAMSWSPD
QELVTLTTGQDTIIMMTKNFEPITEVGIHQDDFGEGKFITVGWGKKETQFHGSEGKHAAQ
RKTIEVQPAMSWDDRRPRVTWRGDGQLFAVSSVCPLTGARKVRVWNRECVLQSTSETVNG
LEQSLCWKPSGSLIAATQRHPNKHSVVFMEKNGLLHGDFTLPFGKEQVKVKELLWNSDST
VLAVWLEDMTPGEGGQVNTYIQLWTVGNYHWYLKQNLYFGSNPQRAPAYVSWDPERPLRL
HLVTRGWVSLNYDWGWSTDRSHGEDGHDNANVAVIDGDKLLVSTFRQCVVPPPMCAYDLQ
LPAPVNLVTFQRQRTNELAALTADGHISVYGQGTEKLSEPAAGLGGFRSVTHAPQLKTTY
RVAVDQEEPLALRLLLWLREDVFLGVGACTDGPSQSNMLILGPSEAQGPQPTLEIRSHVE
VEGHVISMCHSSKTGTVALQLEDGQIRKFLWDSLKPSVVEWQDSTGCRINFPDPCVQTAL
FTIEEEHLLGLTDRSHLFVGETEVASNVSSFVVYDDFLLLTTHSHTCRCFRLTTLTVKGL
QVALAADGGQNQNDQNDETLRRIERGSRIVTVVPQDTRLILQMPRGNLETIRHRALVLAQ
LRKWLDSQRFREAFECMRKLRINLNLIYDHNPKVFLESVETFLRQLDSINHINLFLTELK
EEDTTTTMYPCPVNTTGQSAPAACGKKVDIVCDALRCTMESMDQHKYCLSILTSHVKKTV
PELEVALQKVHELRVNPTSAANAVSAEEALKYLLFLVNVNELYEHSLGTYDFDLVLMVAE
KSQKDPKEYLPFLNMLKTLEPNYQRYSIDKHLKRYRKALHHLSKCGEEHFTESLNLVKDQ
RLYSEALGLYPTDSPQYKALSCAYAEYLVEQQQAEQAGLLLWRCGEATRALQAFVGSASW
RNALCVAEQIPLPSDQLALLARDLAEKLIELRRYTEAAILLERYAKDCEEAISALITGAV
WEEALRLVYLYNRQDIIETNFKPALLEACSSQASYLEAQKAMFTRHKTRLSVVRELKEKA
RLELLDEDVPDCPEAELYSEASSVMTGSHAGSKYSHSNSRISSRSSKNRRKAERKKLSLK
EGTPLEDMALLHALAEIIHSVDKMREEVHSLLKALVLFQFDGQAGRLQHAYGEALQMIEV
ALPEVWQEGLQQTQAPITGPNSTANSIMASFQQPRPSATQDSETPPTPKMRNGVKWKLSI
LK
NT seq
3969 nt
NT seq
+upstream
nt +downstream
nt
atgcgcaacttgaggttgctgaagagccttcgttgcttgaagctgcaaggcccgggcacg
ccgcaatgtttcactgttcggacggacacaggcaccttgctcatcgcttcagaatactcc
gtcacagagttggacacacgagctggccaggtggtgaatgaggtgtcgttgacagttgag
cgctatcttccagaggatggcggtgggacagttgttggtatccaagacttaccagaccag
gagtctgtgtgtgtggcaacagccactggtgatgtcattctctacaatctcaacactaac
cagctggagtgtgtgggcagtgtggacagtggtctgtcagccatgagctggagcccggac
caggagctggtcactctcaccactggtcaggacaccattatcatgatgaccaaaaacttt
gaacccatcacagaggttgggatccatcaggatgactttggagaggggaagtttatcaca
gtgggctgggggaagaaagagacacagttccatggctcagagggaaagcacgctgcccag
aggaagactatagaggtgcagccggccatgtcgtgggacgaccgcaggccgagggtgacg
tggagaggagacgggcagctcttcgctgtgagctcagtttgccccctgactggtgccagg
aaggtcagagtgtggaacagagagtgtgtcttacagtcgacaagtgaaaccgtcaacggt
ctggagcagtcactgtgttggaaaccgtcaggtagtttgatagcggccacacagcgtcat
cctaacaagcacagtgtggtgtttatggagaagaacggcctcctacacggcgacttcacc
ctgccctttggcaaagaacaggtcaaggtgaaggagctgctatggaacagtgactcgact
gtgttggctgtgtggctggaggacatgacaccgggagaggggggtcaagtcaacacatac
attcagctgtggacagtaggtaactaccactggtacctgaagcagaacctgtacttcggc
agcaacccccagagggcaccagcctacgtgagctgggatcctgagaggcccctgcggctg
caccttgtgacccgaggctgggtcagcctgaactacgactggggctggagcaccgaccgc
agccacggggaggacgggcatgacaacgccaacgtggccgtgatcgacggcgacaagctc
ctcgtgtcaacgtttcgtcagtgtgtggtgcccccgcccatgtgtgcctacgaccttcag
ctgcccgcccccgtcaacctggtgaccttccagcgccagaggaccaatgagctggcagcg
ctcacagccgacggacacatctctgtctacggccaaggtactgagaaactgagtgagcct
gcagctggattgggaggattccgatctgtcacacacgcccctcagctaaagacaacctac
agggttgcggtggatcaggaggaacccctggctctgcgtctgctgctgtggctgagagag
gatgtgttcctgggggtgggggcctgtacagacgggccgtcccagtccaatatgctcatc
ctgggaccctcagaggcccagggcccccagccaaccctggagatcaggtcacatgtggag
gttgaaggtcacgtgatcagcatgtgtcacagctccaagacgggcacggtggcgctgcag
ctggaggacggccagatcaggaagttcctctgggactctttgaaacctagtgtggtggag
tggcaggactcaacaggctgcagaatcaacttcccagatccctgtgtgcagacggccctc
tttaccatagaagaggagcatctgttagggcttacggaccgatctcacctgtttgttggt
gagacagaggtggcctccaacgtttcctccttcgtggtctacgacgacttcctgctgctc
accacacactcgcacacttgccgctgcttccgactcaccacgctcactgtcaaagggctg
caggtggccttggctgccgacggaggtcagaatcagaatgaccagaatgacgagactctc
cgcaggatagagaggggctccagaatcgtcactgtggtcccccaggacaccaggctcatc
ctacagatgcctcgcggtaacctggagaccatccgccatcgagcactggtgttggctcag
ctccgaaagtggctggacagtcagaggttccgagaggcctttgagtgcatgaggaagctg
cggatcaacctcaacctgatctacgaccacaaccccaaggtgtttttagagagcgtggag
actttcctgagacagctggactctatcaatcacatcaacctgttcctcacagagctcaag
gaggaagataccactacaacaatgtacccttgtccagtgaacactacaggacagtcagcc
cctgcggcttgtgggaaaaaggtggatattgtctgtgatgcgttacgctgcaccatggaa
tctatggaccagcataagtactgtctgtctattttgacgtcacacgtgaagaagactgtt
cctgagctggaggttgccctgcagaaagtccacgagcttcgagtgaacccaaccagtgct
gccaacgcagtgagtgcggaggaggctctgaagtacctcttgttcttggtcaatgtcaac
gagctgtatgaacactctctgggcacctacgactttgacttggtcctcatggtggccgag
aagtcccaaaaggaccccaaagagtaccttcccttcctgaacatgctgaagactctagag
cccaactaccagcgctattccatcgacaaacacctcaagagatacaggaaggccttgcat
cacctcagcaagtgtggtgaggagcacttcaccgagtccctgaatctggtgaaggaccag
aggctgtatagtgaagccctgggtctctacccaacagacagccctcagtacaaggcgctg
agctgtgcctacgccgagtacctggtggagcagcagcaggcggagcaggcagggttgttg
ctgtggcgctgcggcgaggcgacccgcgccctccaggcctttgtgggcagtgccagctgg
aggaacgccctctgtgtggcagagcagatccccctgccatccgaccagctggcattgctg
gccagggacctggcagagaaactgatagagctcagaagatatacggaggcggccatattg
ttggagcggtatgccaaggactgtgaggaggccatctcagctctgatcacaggtgcagtc
tgggaagaagcacttcgattggtgtatttgtacaacagacaagacataattgaaacgaac
ttcaaaccagctctcttggaagcatgtagttctcaggcctcttacctggaagctcagaag
gcgatgttcactcgtcacaaaacccgtctgtccgtggtacgggagcttaaggaaaaagcc
aggctggagttactggatgaggatgtcccagactgtccggaggcagagctctactcagag
gccagtagtgtgatgacaggcagccatgctggctccaagtactcgcatagtaactcccgc
atctcctcgaggtcgtctaagaatcgccggaaggccgagcgcaagaagctgagtctgaag
gaagggacccccctagaggacatggccctgctgcatgccctggcagagatcatccactct
gtggacaagatgagagaagaggtgcacagcctgctgaaggccctggtgctgttccagttt
gacggacaggcggggaggttgcaacatgcctatggggaggctctccagatgatagaggtg
gcccttcccgaggtgtggcaggagggtcttcagcagacccaggcaccgatcacaggtcct
aactccacagccaacagcatcatggcttcatttcaacagccaagaccctcagcaacccaa
gattcagagaccccaccaaccccaaaaatgagaaatggtgtcaagtggaagctgagtatt
ctgaagtag
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