Oncorhynchus kisutch (coho salmon): 109905258
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Entry
109905258 CDS
T09179
Name
(RefSeq) protocadherin-12-like
KO
K16499
protocadherin delta 2
Organism
oki
Oncorhynchus kisutch (coho salmon)
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
oki04515
]
109905258
Cell adhesion molecules [BR:
oki04515
]
Cadherins
Protocadherins
109905258
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_3
TMEM154
DUF5527
Motif
Other DBs
NCBI-GeneID:
109905258
NCBI-ProteinID:
XP_020358122
Ensembl:
ENSOKIG00005004873
LinkDB
All DBs
Position
LG15:complement(36245914..36267156)
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AA seq
1186 aa
AA seq
DB search
MLDRTVTSHTVMLLALLLVLWLISGAQSSDPAPLTVMYQVWEEQPVGTRVGRLVDDLRQR
GETGVLEDFQVVEHGQALPFSIGVRDGTVATLGQLDREELCRGSDLCELAFSVLYRKGGV
IHFLRVRVEVMDLNDHSPTFPSSQQEMEISEMATLRMRIPLDRAVDPDAGPNGLQTYSLS
VNQHFALDVRSAVDGPKQAELVVIKELDREVHSSFELTLVAWDKGNPPRSGSTLVQVNVL
DSNDNSPMFEDSTPTVELAEDTARGTSVINLKATDPDQGANGEVEYSLSKHAPPEVQKLF
SIHPQSGVVTLKGPLDYEAKHFYEVDIQARDLGPNAIPSHCKLHIKLRDVNDNAPRIHVT
WTPPDSPVATVLEGAPEDTFLALVMVSDADSGDNGNVHAHIQHGSGHFRLKKIHGDNYMI
VTNGTLDREKVMEYNLTLLAQDYGDPPLSCVRHLVVHVLDENDNAPVFSKSHYRASFKEN
NTVGLQVLKVEANDVDIELSGRVSFSIRESNELGPPMASFAIHPTSGVVSAQQSLDYEES
PTYSFIVEAIDHGHPPLTSTATVLIEIQDVNDNYPVIKEPMPKKGIAFVSVLVNEEKGEI
VTQLGDGAEEGSPDPHTGRSVQNGFMGFLATTIKANDPDSGLNGRLSYMITDGNPTGLFR
LNDTTGQLYVNTTNATELIGKTFKVDIAVSDKGSPRLLTKATLEVAFINLRDHLKNSAPG
NHGKLSFTMMVAICLGASCILLLLAVALVTTFCRPTKRDNHSYNCRTAESTYTSHPRRPQ
KNIRKTDIQLVPVLRGRREDPPEDDEAQPLSPMLLVVEEQNTETQYSVANSMNPTVHSQA
YPEGGSTLPVSHSRTLRKPGSIELDGTLPWTPAIPYRTLRKARNPSSSSSLYQTSTLRRH
GNSEIQVSPDVEVPETSSQVATLRRPKNTDTRSGLDAEDHRRMLRNLVRLSMAAFGENSI
ELSAASPEVQQVSQLLSLLHQGQLQPRPNFRGNKFSQRAGRSYAQDTDWQSTKDSGHGES
EAGDMDWDMGRDSPVDPLLEEGLNNLLNNPDDVFADIEDPAWMSRLSLPLTADYHENVFV
PNGPPSPETHCSPDTLDSASFSTFGKKPEDGSLGGALISEVNTLFNMLLTQKGDSQPRPS
PDVLYRLSATYRRSLGLEGDTAAAGGANTQRNSVNPEKRSPLAQCP
NT seq
3561 nt
NT seq
+upstream
nt +downstream
nt
atgctggacaggaccgtaacatctcacacagtcatgctgctggctctactgctggttctg
tggcttatttctggggcccagtcttcagacccggccccattaactgtcatgtaccaagtc
tgggaggagcagcctgtgggcaccagggttggccgtctggtcgatgacctgcgtcagaga
ggcgagaccggggtactggaggatttccaggtcgtggagcatggtcaagccctgcctttc
tccattggagtaagagatggaactgtcgccaccctaggccagctggaccgggaggagctg
tgtcgaggctcggacctgtgtgagctggccttcagtgtcctctacaggaaaggtggtgtt
atccacttcctgagggtgcgggtggaggtgatggacctaaatgaccacagcccaactttc
cccagcagccagcaggagatggaaatctctgagatggccacattgaggatgcggatcccc
ctggaccgagcggtggacccggacgccggccccaatggtctgcagacctactcgctgtcc
gtcaaccagcattttgccctagatgtaaggagcgctgtggatgggccaaagcaggcagag
ctggtggtgatcaaggagctggacagggaggtgcattcctccttcgagctgactctggtg
gcctgggacaaggggaatcctcccaggtcgggcagtactctggtccaggtcaacgtcttg
gactctaatgacaacagccccatgtttgaggatagcacccccactgtggaactagccgag
gatacagctcgtgggactagcgtcatcaacctcaaggccacggaccctgaccaaggggcc
aacggggaggttgagtactctctaagcaagcatgcgccacctgaggtgcagaagcttttc
agtatccacccccagagtggggtagtgactttaaaaggcccactggactatgaagccaaa
cacttttatgaggtggacatccaggcgcgtgatcttgggcccaacgccatcccctctcat
tgtaaactacacatcaagctaagggatgtcaatgataatgcaccaaggatccatgtcact
tggacaccccctgattccccagtggcaactgttttagaaggtgcaccagaggacacgttc
cttgcactggtgatggtctctgatgcagactccggggacaacgggaatgtgcacgcccac
atccagcatggatccggccacttccgcctcaagaaaatccatggcgacaattacatgatc
gtaaccaatggcaccctggatcgggaaaaggtcatggagtataatctcacattacttgcc
caggattacggtgacccgccactgtcatgtgttagacacctagttgtccatgtgttggat
gagaatgacaatgcccctgtgttctccaagtcccactacagggcttccttcaaggagaac
aataccgtggggctccaggtcctcaaggtagaggccaatgatgtggatattgagctcagc
ggcagggtgtccttctccatccgagagtccaatgagctgggacctcccatggcgtctttc
gccatccaccccaccagtggtgtagtcagcgcccagcagtcattggactatgaggagtcg
cccacatactccttcattgtggaggccatagaccatgggcatccacccctcaccagcacc
gccacggtactcatcgagatccaggatgtcaacgacaactaccccgtcatcaaggagccg
atgccaaagaaaggcatagcctttgtgagtgtcctggtcaacgaggagaagggggagata
gtgacacaactaggggatggtgctgaagaaggctcccccgatcctcatactggtcgctct
gtccaaaatggatttatgggattcctggccactaccatcaaggctaatgatccagactct
ggcctgaatggaagactcagctacatgatcacagatggaaaccccacaggactattcaga
ctcaatgacaccaccggacaactgtatgttaacacgaccaatgctacagagctcattggg
aaaactttcaaagtggatattgctgtatcggacaagggttctccaaggctattgacaaag
gccaccttggaggtggctttcatcaacttgcgggaccatttgaaaaactcagcccctggt
aaccatggtaagctgagtttcaccatgatggtggccatctgccttggggccagctgcatc
ctgcttctcctggcggttgccttggtgaccaccttctgtcgccccacgaaacgagacaac
cattcctacaactgcaggacggccgagtccacctacacgagccaccctcgccgcccacag
aaaaacatcaggaagacagacatccagctggtgccagtcctgaggggacgaagggaggac
cctccagaagatgacgaagcccagcccctctcccctatgctccttgtggttgaagagcaa
aacactgaaacgcagtacagcgttgccaactccatgaacccaacagtccactcccaggcc
tacccagaggggggatcaacgctaccagtctcccattccagaacactcaggaaacctggg
agcatcgagctggatggcactcttccttggacccctgccattccttaccgaaccctgcgt
aaggcaagaaacccttcatcatcctcctcactgtatcagaccagtaccctgaggcgacat
gggaactctgagatccaggttagccccgacgttgaagtgccagaaacatcgtcccaggtg
gcaacacttagaaggcccaagaacacagataccagaagtggacttgacgctgaagaccac
agacggatgctgaggaatctggtccgtctctccatggctgccttcggagagaactccatt
gagttgtctgctgcctctcccgaagtgcagcaggtttctcagctcctctccctgctccac
cagggtcagctgcagccaagaccaaacttccgaggcaacaagttctcccagcgtgctggc
aggtcttacgctcaggacactgattggcagagcaccaaggacagcggtcatggtgagagt
gaggccggagacatggactgggacatgggccgagactcccctgtcgacccactactggag
gaggggcttaataacctgctcaacaaccctgatgacgtctttgctgacatagaggaccct
gcgtggatgtcccgcctctccctccccctaacggccgactaccacgagaatgtttttgtt
cccaatgggccaccgtcccctgaaacccattgctccccagacacccttgactctgcctcc
ttctccaccttcggtaagaagccggaggatggctcactgggcggggccttgatctcagag
gtcaacactttgtttaatatgctcctgacccagaaaggcgactcccagccccgcccctcg
ccagacgtgctctacagactgtccgccacctaccggcgctcgctggggctggaaggagat
accgccgcagcagggggcgccaacacacaaaggaactctgtgaaccccgaaaagaggtcc
cctctggctcaatgcccttag
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