Oncorhynchus kisutch (coho salmon): 109905296
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Entry
109905296 CDS
T09179
Name
(RefSeq) LIM and calponin homology domains-containing protein 1 isoform X1
KO
K24422
LIM and calponin homology domains-containing protein 1
Organism
oki
Oncorhynchus kisutch (coho salmon)
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
oki04990
]
109905296
Domain-containing proteins not elsewhere classified [BR:
oki04990
]
LIM domain-containing proteins
Other lim domain-containing proteins
109905296
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4757
CH
LIM
Motif
Other DBs
NCBI-GeneID:
109905296
NCBI-ProteinID:
XP_031646128
Ensembl:
ENSOKIG00005025242
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All DBs
Position
LG15:complement(40319869..40462596)
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AA seq
1330 aa
AA seq
DB search
MASPAADIGQPHQRHLLSESASEPAFLEAQKWIEAVTGRCFGDKDFRGGLENGILLCELL
SAIKPGLVKKINRLPTPIAGLDNLSVFLRGCEELGLKGSQLFDPGDLQDTSTRPKTKVAD
CSRKLTNVLITIYWLGRAANSCISYNGPTLDLKEFEGLLSQMRKEAEDTESPQRSIRDSG
YIDSWDSERSDSLSPPRHGREDSFDSLDSLGSRSRQTPSPDVLVARGIGSDGRGSDSESD
VGPHGGRKLPDVRKDDMLARRTSVSEPRVMVPFNQYLPNKSNASGYMPTPLRRKRGDREG
REEDGGRVGGGGRKSWSTATSPIGSNRPFSTPARSCSEELYRLSSLTTSPMTTSIIVTSP
PSAGASPETTRKFPPMMDREEAGPKKVGLAISLATDTGRNNDMWARHALTSPKHSSTTGP
SQFLPVPAARATTTLMVACQGHMGKSEVEGREGDKPAVARRPSWLDDDLQPIFSHRAASV
SDDPESVSMIDVRCEEDPSLPHHSQVRHELMHNQYNMMKEEEDHWQDDLARWKSRRRSVS
QDLIKKEEERKMMEKLMTGEGGAISQRRKSIKTYREIVEEKERRENELREAYQSARTPEE
AALVLHRYALRFTISEAVLERLQLPKLLDRSVSEDPTTATSTRLPLTPSSRSPNSTSPEE
DPNGPLKYLRQQSLPAPKFTATVEAQVAGFPQGQSHRPQIQSRTPVPSPSIQAASPKSVP
LLTPKPYIQSKGTQMLAGPKPGKVDGLLQVNGDMGNDEVTTPESDGRTTPAWFYPSTATP
TASSDPSDTPPCVATPPPTHSPSPRASPLTAMTTLAQDGTAVPPSSVPGEGDAQEKSNAQ
EYIPPSRPTSLPSELQSTESIVEAGGRSAAGPLGEEPNTAAAAVQPSPATDSQRATKEQR
EVCTNATATRPNATVPCPVQSEHATQQAQPMTAQVSEPSLELSQSAEDVAALADPGPVRN
KPPREAPTTELANSASYPPETGNPRLGLRWEFFAPPEGEEPKRGKVPVTQVSSPVVIQAK
RGDRWAWDPDEERKRQERWQQEQEHMLQEKYQREQEKLKQEWERAQREVEEEERRYHEEE
RRILEETVAPLAPLSCNLPSPIQGDAPTPMDPQDTIVRSLADWERKQELLERQGGSTESV
EWKRQDNDRSSDISTASRDESLKTAVSSISQNSSQTDKLTPSLRNGQRAPPAMALPQPPN
KKQHPEVLLDCAKPSQQTPSRDRRCGSIETMGPSPLKSPTTCPSDMPPSPNRSVSGKKLC
SSCGHPLGKGAAMIIETLSLYFHIQCFKCGVCKGQLGDTTTGTDVRIRNGLLNCHQCYIR
SRSAGQPTTL
NT seq
3993 nt
NT seq
+upstream
nt +downstream
nt
atggcaagtccggctgcagatataggacaaccacaccagcgacatctcctctccgaatcg
gcctccgagcccgcgtttctagaagcgcagaaatggattgaggcggtcacaggcagatgc
ttcggtgacaaggacttcaggggaggcctggagaacgggatcctgctgtgcgagttgctg
agcgccatcaaacctggcttggtgaagaaaatcaacagattacccactcccatcgctggc
ctggacaacctgagtgtgttcctgcgtggctgtgaggagctgggactgaagggctctcag
ctgtttgaccccggggacttgcaggacacctcgacacgccccaaaaccaaggttgccgac
tgcagcaggaagctgacaaatgttctgattaccatatactggctgggccgggctgccaac
agctgcatttcctacaacgggcccacacttgacctgaaggagttcgaaggcctgctgtca
cagatgcgaaaggaggcggaggacacggagagcccccaacgcagcatacgggacagcggc
tacattgacagctgggactcggagcgcagcgactcgctctccccgcctcgccacggccga
gaggactccttcgacagcctggactcgctcgggtcacgctccagacagacgccctcgccg
gacgtactggtcgcccgcggcatcggcagtgatggccgcggcagcgactcagagtccgac
gtcggaccccacgggggcaggaagctgccggacgtgcgcaaggatgacatgctggcacgg
cggacctcggtgagcgagcccagagtgatggtgcccttcaaccagtacctgcctaacaag
agcaatgccagtggctacatgcccacaccgctgcgccggaagaggggtgaccgtgagggt
cgggaggaggacggtggccgagtgggcgggggcggccgcaagagctggagtaccgccacc
tcgcccataggaagcaatagacccttcagtacccccgcccgctcatgctccgaggaacta
taccgcctgtcgtccctgacaaccagccccatgacgacctcgatcatcgtgacgagcccc
cccagcgccggggccagcccggaaacaaccaggaagttccctcccatgatggacagggag
gaggcaggtccaaagaaggtggggttggctatatccctggcgacagacaccgggaggaac
aacgacatgtgggctcgccacgcccttacctcgccaaaacacagcagcactaccggtcca
agccagttcctgcccgttcctgcagccagggcaaccaccacactgatggtcgcctgccag
ggtcacatgggcaagtcggaggttgaaggtcgcgagggagacaaaccggcggtggcgaga
cgtccatcttggctcgacgatgacctccagccaatattcagtcacagagctgctagtgta
tcagatgacccagagagtgtgagtatgattgacgtgcgctgtgaggaggaccccagcttg
cctcaccacagccaggtgcgccacgagctcatgcacaaccagtacaacatgatgaaggag
gaagaggaccactggcaggacgacctagcccggtggaagagtcgcaggagaagcgtctcc
caggacctgatcaaaaaggaggaggagaggaagatgatggagaagctgatgacaggcgag
ggaggggccatttctcagaggaggaagagtatcaagacctaccgggagatcgtggaggag
aaggaacgtcgtgagaacgagctccgcgaggcctaccagtcggcccgcacccctgaggag
gcggcgttggtcctccaccgctacgccctgcgcttcaccatcagtgaagcggtgctggag
cgcctgcaactgcccaagctgctggacaggagcgtctctgaagatcccaccactgccacc
agcacacgtctccccctcacccccagctcccgttctcccaattcaacctccccggaagaa
gatccaaatggtcctctgaagtacttgaggcagcagtcgctcccggcgcccaagtttacc
gctaccgtcgaggcccaagtggcggggttcccccagggtcagtctcatcgcccccagatt
cagtcacgcacgcctgtaccaagcccctctatccaggctgcctcgcctaaatctgttcct
ttgctgacacccaagccttacatccaatccaagggcacgcagatgctggcgggacccaag
ccaggcaaggtggacggcttgctgcaagtgaacggcgacatgggaaacgatgaggtcacc
actccagagagcgatggaagaaccacccctgcatggttctacccttccactgccacgcct
acagcctcctctgacccttccgacacacccccatgtgtggccactcccccacccacacat
agcccctcccccagggcgagcccattaacagccatgacaactttggcacaggatggcacc
gcagtgccaccttcttcagtgccaggagaaggtgatgcccaggagaagagtaacgcacag
gagtacatcccacctagccggcccacctcactgccctcggagctgcagagcacagagagc
attgtggaggcgggcggcaggtctgctgcaggcccactgggggaggagcccaacacggca
gcggctgcagtccagccctctccagctacagactcacaacgcgctaccaaggaacaaaga
gaagtgtgtacgaatgccacagcgaccagaccgaatgccacagtcccctgtcctgttcaa
tcagagcacgcgacacagcaagctcagccaatgactgcacaggtcagtgagcccagcctg
gaattgtctcagagtgcagaggatgttgctgccttggctgatccaggacctgtcagaaac
aaaccaccacgtgaggctcccacaacagagctggctaacagtgccagttatccgccagaa
accggcaaccctaggttaggcctacgttgggagttcttcgccccaccagagggggaggag
ccgaagcgtggtaaagtgccggtcactcaggtgtcatccccggtagtgattcaggctaag
cggggtgaccgctgggcttgggacccagatgaggaacgaaagcgtcaggaaaggtggcag
caagagcaggagcacatgcttcaggaaaagtaccagcgtgagcaggagaagctgaaacag
gagtgggagagagcgcaaagagaggtggaagaggaggagaggcggtaccatgaggaggag
cgcaggatactagaagagactgtggcccccctggcccccctctcctgcaacttgccctca
cccatccagggtgacgcccccacaccaatggacccccaggacaccatcgtccggtcgctg
gccgactgggaacgcaagcaggagctgctggagaggcagggggggagcacagagagtgtg
gaatggaaacgacaagacaacgacaggagtagtgacatcagcacagcgtccagagatgag
agcctgaaaacagcagttagctcgatcagccagaacagcagtcagacagacaagctgact
ccgagtctgaggaacggccaaagagcacctcccgccatggccctgccccagccacccaac
aagaaacaacatccagaggtcttactagactgcgccaaacccagccaacagacgccctct
cgggacaggaggtgtggctctattgagaccatggggcccagtccattaaagtcacccacc
acatgcccatccgacatgcctccatctccaaacaggtcagtgagcggtaagaagctgtgc
tccagttgcggccaccctctgggcaaaggggcggccatgatcattgagaccctcagcctt
tacttccacatccagtgctttaagtgtggggtctgtaaggggcagctgggtgacaccacc
acggggacagacgtgaggattcggaacggcctcctcaactgccaccagtgctacatccgc
tcccgctcagccggccagccaaccacattgtga
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