KEGG   Oncorhynchus kisutch (coho salmon): 109905339
Entry
109905339         CDS       T09179                                 
Name
(RefSeq) high mobility group protein B1-like
  KO
K10802  high mobility group protein B1
Organism
oki  Oncorhynchus kisutch (coho salmon)
Pathway
oki03410  Base excision repair
oki04140  Autophagy - animal
oki04217  Necroptosis
Brite
KEGG Orthology (KO) [BR:oki00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    109905339
 09140 Cellular Processes
  09141 Transport and catabolism
   04140 Autophagy - animal
    109905339
  09143 Cell growth and death
   04217 Necroptosis
    109905339
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:oki03036]
    109905339
   03400 DNA repair and recombination proteins [BR:oki03400]
    109905339
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:oki04147]
    109905339
Chromosome and associated proteins [BR:oki03036]
 Eukaryotic type
  Nucleosome assembly factors
   HMG (high mobility group) proteins
    109905339
DNA repair and recombination proteins [BR:oki03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Other BER factors
     109905339
   MMR (mismatch excision repair)
    Other MMR factors
     109905339
Exosome [BR:oki04147]
 Exosomal proteins
  Exosomal proteins of colorectal cancer cells
   109905339
SSDB
Motif
Pfam: HMG_box HMG_box_2 HMG_WDHD1 HMG_box_5
Other DBs
NCBI-GeneID: 109905339
NCBI-ProteinID: XP_020358241
LinkDB
Position
LG15:46871426..46874889
AA seq 192 aa
MGKDPRKPRGKMSSYAYFVQTCRAEHKKKHPEASVNFAEFSKKCSERWKPMSPKEKGKFE
DMAKQDKVRYEREMKNYIPPNGQKKKRFKDPNAPKRPPSAFFIFCADFRAKIKSEHPGLS
IGDTAKKLGVMWNSSAAEEKKPYEKKAATLKEKYDKDIASYRTNGRVDTASSAAADDEED
DDEEDDDEDDDE
NT seq 579 nt   +upstreamnt  +downstreamnt
atggggaaagatcctaggaaaccgagaggcaagatgtcgtcatatgcttacttcgtgcag
acctgcagggcagagcacaagaagaaacaccccgaagccagtgtcaacttcgctgagttc
tccaagaaatgctcagagcgatggaagcccatgtctcctaaagaaaaaggcaagtttgaa
gacatggcgaagcaagacaaggtccgctacgagagagaaatgaagaactacatcccaccc
aatggccagaaaaagaagaggttcaaggatcctaatgcccccaagagaccaccgtctgcg
ttcttcatcttctgtgctgacttccgggccaagataaagagcgagcacccaggcctgtcc
attggagacactgctaagaagctgggagtgatgtggaacagctctgcagctgaggagaag
aagccgtacgagaagaaggccgccacgctgaaggagaaatacgacaaagatatcgcctca
taccgcaccaatggtagagtggatacggcctcctccgcagctgctgacgatgaagaagat
gatgatgaggaagatgacgatgaggatgatgacgagtag

DBGET integrated database retrieval system