Oncorhynchus kisutch (coho salmon): 109905436
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Entry
109905436 CDS
T09179
Name
(RefSeq) Down syndrome cell adhesion molecule-like protein 1 homolog
KO
K06768
Down syndrome cell adhesion molecule-like protein 1
Organism
oki
Oncorhynchus kisutch (coho salmon)
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
oki04515
]
109905436
Cell adhesion molecules [BR:
oki04515
]
Immunoglobulin superfamily
DSCAM family
109905436
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
fn3
Ig_3
I-set
Ig_DSCAM-DSCAML_C
Ig_2
ig
V-set
Pur_ac_phosph_N
C2-set_2
Interfer-bind
fn3_2
V-set_CD47
C2-set_3
Ig_6
ChitinaseA_N
DUF1461
Motif
Other DBs
NCBI-GeneID:
109905436
NCBI-ProteinID:
XP_031674433
Ensembl:
ENSOKIG00005039976
LinkDB
All DBs
Position
Unknown
AA seq
1567 aa
AA seq
DB search
LSGSPRIRDMRNITAVAGRNTFINCRVIGYPYYSIKWYKEGLLLPDNHRQVVYENGTLKL
SDVQKVLDEGAYLCSVLIQPQIFISQTVYVQVKVPPLIQPFDFPPTSIGKLMYIACVVSS
GDMPIHITWRKDGQEVAPSSGVNIETKEYMSSLQIGKVSLKHNGNYTCIASNDAATVSSE
RQLTVTVPPQFVVQPNNQDGIYGKAGVLNCSVDGYPPPKVMWKHAKGTGNPQQYHPVPLT
GRIQIMGNGSLLIRHVLEEDRGYYLCQASNGVGSDISKSMVLTVKIPAMITSHPNTTMAI
KGQIKELNCTARGEWPIIIRWERGDTVIDPDRNPRYAITTSPNEKSDEVLSTLKLKPAER
GDSVFFSCHAINSYGEGRGLIQLTVQEPPDPPELEVREVKDRSMNLRWTQRFDGNSIITS
YDIEYKNKTDPWELKHATRKISPTNNQANIVDLHPAQVYSIRMFSYNKIGHSQASKELTI
STEEAQPDGPPMEVFLQPMTSQSIRVTWKAPRKELQNGVIRGYQIGYRENGPGSNGQYSI
VEMKATGDSEVYTLDNLKKFAQYGVVVQAFNRAGTGPSSSEINATTLEDVPSQPPQTVRA
ISVTSDEAVITWAEPPRLTLHGVLKGYRVVFWSLFPDGEWGEMQNITTTREQVELRGLEK
FTNYSVQVLAYTQAGDGVRSNVLYIQTREDHPGPPAGIKAVPSSTSSVVVSWLPPHKPNG
IIRKYTIYCSSPGSGQPAPSEYEANPELLFYRVTHLNRGQQYLIWAAAVTTAGRGNISDK
VTVEPAGKAPAKILSFGGTVTTPWMKEVRLPCSSVGEPTPTIKWTKDSEDTAIPVTLDGQ
RLIMVNGTLVLRSVKAEDSGYYTCTATNTLGFDTIIVNLLVQVPPDQPRLTVSTTSPTSI
TLAWIPGDNGGSSIRGFVLQYSVDNMEGWRDVFISSSERSFKLDNLRCGTWYKVKLAAKN
SVGAGRISEIIEAKTHGREPQFNKEQPVFTHVNSTHARLNLQGWASGGCPITAVLLEFRP
KGNWAWQNVRTNATADVFLAELREATWYELKMKACNSAGCGNQSSQFATLDNDGSTIPPI
KSARPEGDDVKKLFSIGCPVILVTLVLALLFIIRKKRKEKRLKRLRDAKSLAEMLISKNN
RSFDTPVKGPPQGPRLHIDIPRVQLLIEDKEGIKQIGEDKATIPVTDTEFSQNVNPQSFC
TGVSVHHPALIQNTGPLIDMSDIRPGTNPVSRKSVKSAHSTRNRYSSQWTLTKCQSSTPA
RTLTSDWRTVGSQHGITVTESDSYSASLSQDTDKGRNSMVSTESASSTYEELARAYEHAK
LEEHLQHAKFEITECFISDSSSDQMTTGTNDNGDSMTSMSTPSETGLCRFTASPPKPQEY
DRGRPTNVAVPIPHRANKSEWTGKSDYCNLPLYMKTDPFFRKQSELHDPCPVVPPREAPI
RSLAQRAYHTQGRHMTLDSSKQQQALTVGHAGLAGLSASGGASGGGGGVGGATGGPSGGS
STTSLSQRTLTMPGSSSSSAQSAAAAATASASGGATGGDSRDPETLGRLERQKQAAGGAY
SKSYTLV
NT seq
4704 nt
NT seq
+upstream
nt +downstream
nt
ctctcaggttctcccaggatcagggatatgcgtaacatcacggcggtggctgggaggaac
acctttataaactgccgtgtgattggctatccctactactcaatcaagtggtacaaggag
gggcttctgctgcccgacaaccatcgtcaggtggtgtatgagaatggtactctgaagcta
agtgacgtccagaaggtgttggacgagggggcgtacctctgcagcgtgctcatccaacca
cagatcttcatcagtcagaccgtctacgtccaagtcaaagtgccccctctgatccaaccc
tttgacttcccccccacctccattgggaagctcatgtacatcgcctgcgtggtgtcgtct
ggcgacatgcccatccacatcacctggcgtaaggacggccaggaggtcgcgccctcgtcc
ggcgtcaacatcgagaccaaggagtacatgagctcgctgcagatcggcaaggtgtccctc
aagcacaacggcaactacacctgcatcgctagcaacgacgccgccaccgtcagctctgag
aggcagctcactgtcacagtgcctcctcagtttgtggtccagcccaataaccaggatggg
atctacggcaaggcgggggtcctcaactgctccgtggatggatacccccctcccaaagtc
atgtggaagcacgccaaaggtacagggaacccccagcagtaccacccagtgcctctgacc
ggtcggatccagatcatggggaacggctccctgctgattcgtcacgtcctggaggaggac
cggggctactacctgtgtcaggcctccaacggggtgggctccgacatcagcaagagcatg
gtcctgaccgtcaagatcccagcaatgatcacgtcgcaccccaacaccaccatggccatt
aagggacagattaaggagctgaactgcacagcgaggggggaatggcctatcatcatccgt
tgggagcgtggtgacacggtcatcgaccccgaccgtaaccctcgctacgccatcaccacc
agccccaacgagaaaagtgacgaagtattgtctacgctgaagctgaagccagcagaacgt
ggtgactcggtcttcttctcctgccatgccatcaactcctatggagagggacggggactc
atccagctcactgtgcaagagcccccagaccctccagagttggaggtgagggaggtgaag
gatcggagtatgaacctgcgctggacccagagatttgacggcaacagcatcatcaccagc
tacgacattgagtacaagaacaagaccgatccatgggagttgaagcatgccacccgtaag
atctctcccaccaataaccaggccaacatcgtggatttacaccctgcccaagtctacagc
atccgcatgttctcctacaacaagatcggacacagtcaagccagcaaggagctcaccatc
agcaccgaggaagcgcagcccgatggtcctcctatggaggttttcctccagcctatgacc
tcgcagagcatccgcgtcacctggaaggcccccaggaaggagcttcaaaacggggtgatc
cggggttaccagattggttaccgtgagaacgggccgggcagtaacggccagtacagtatc
gttgagatgaaggctacaggggacagtgaggtgtacaccctggacaacctgaagaagttt
gcccaatatggagtggtggtccaggccttcaacagggccggcacaggcccctccagctct
gagatcaacgctaccacactggaagatgtgcccagccagccgccccagaccgtgcgggcc
atctcggtgacatccgacgaggcagtgatcacctgggcggagcccccgcgtctgacactg
cacggcgtgctgaagggttaccgtgtggtcttctggtccctcttccccgacggagagtgg
ggagagatgcagaacatcaccacaacccgtgagcaggtggagctgagagggctggagaag
ttcactaactacagtgtgcaggtgctggcctacacccaggctggggatggggtcaggagc
aatgtgctgtacatccagacccgcgaggaccaccctggccccccggctggcatcaaagct
gtgccctcatccaccagcagtgttgtggtttcctggctacccccgcacaagcccaatgga
atcatccgcaagtacaccatctactgctccagccccggatcaggccaaccagcccccagc
gagtacgaagccaaccccgagctgctgttctaccgggtcacccacctgaaccgcggacag
cagtacctcatctgggccgccgccgtcaccaccgccggacgggggaatatcagcgacaag
gtcactgtggagcctgctgggaaggccccagctaagatcctatcgttcggaggtacagtg
accactccctggatgaaggaggtgaggctaccctgcagctcagtgggcgaacccaccccc
accatcaaatggaccaaagacagtgaggacacggccatcccggtaactctggacggtcag
aggctcatcatggtcaatggcacactggtcctgcgctcggtgaaggctgaggattctggg
tactacacgtgcacggccaccaacacgctgggctttgacaccatcattgtcaacctgctg
gtgcaagttcccccggaccagccacgtctgactgtctccaccacctcccccacctctatc
accctggcctggatccccggggacaacggaggatcctccatcagaggtttcgtgctgcag
tactcggtggacaacatggaggggtggagggatgtgttcattagttccagtgagaggtcc
ttcaagctggacaacctgcgctgtggcacctggtacaaggtcaaactggccgccaagaac
agcgtgggagcgggacgcatcagtgaaatcattgaggctaagacccacggacgagagccc
cagttcaataaggaacagccggtgttcacccacgtcaactctacccacgcccggctcaac
ctgcagggctgggcgagcggtggctgccccatcacggccgtgctgctggagttcagacct
aagggcaactgggcgtggcagaacgtgcgcaccaacgccacggccgacgtgttcctggct
gagctccgcgaggccacctggtacgagctgaagatgaaggcgtgtaacagcgccggctgc
gggaaccagagctctcagttcgccacgctggacaacgacggcagtaccatccctcccatc
aagtcagcgcggccggagggcgacgacgttaagaagctcttctccatcggctgccccgtc
atcctggtcactctggtcctcgccctgctcttcatcatccgcaagaaacgcaaagagaag
agactgaagagactgagagatgccaaaagcctggctgagatgctgatcagtaagaataac
cggagctttgacacccctgtgaaagggcccccccagggcccccgactccacatcgatatc
cccagagtccagctgctcatcgaggacaaggaaggcatcaagcagatcggtgaagacaaa
gccaccatcccagtgacggacacagagttcagccagaatgtgaatccacagagcttctgt
acgggcgtgtctgtgcatcaccccgccctcatccagaacaccggccctctgattgacatg
tccgatatcagaccaggaaccaacccggtgtcgaggaagagcgtgaagtcggcccacagt
acgaggaaccgctactccagccagtggaccttgaccaagtgccagtcgtctacgcccgcc
cgtaccctcacctccgactggcgcaccgtgggctcccagcatggcatcaccgtcaccgag
agcgacagctacagcgccagcctctcacaggacacggataaggggcgtaacagcatggtg
tccacagagagcgcgtcctccacctacgaggagctggcgcgggcctacgaacacgccaag
cttgaggagcacctgcagcacgccaagtttgagatcaccgagtgcttcatctccgacagt
tcctcagaccagatgaccacgggcaccaacgacaacggcgacagcatgacctccatgagc
acgccgtccgagacgggcctgtgtcgcttcaccgcctcgccacccaaaccccaggaatac
gaccgcggaagacctaccaacgtagccgtgcccatcccccaccgcgccaacaagagcgag
tggactggcaaaagtgactattgtaaccttcccctctacatgaagacagaccctttcttc
cggaagcagtcggagctgcatgacccttgcccggtggtgccgccccgcgaggcccccatc
cgcagcctggcccagcgggcgtaccacacccagggccgtcacatgactctggactcctcc
aagcagcagcaggctctgactgtgggccacgcaggcctggccggcctcagcgcctcaggg
ggagcatcagggggtgggggtggtgtaggaggggcgactggagggccgtctggtggttcc
agcaccacctccctgtctcagaggactctcaccatgcccggttcctcctcttcctctgcc
cagagcgctgctgctgccgctaccgcctcggccagcgggggagccacggggggagactcc
agagacccagagaccctgggcagactagagagacagaagcaggcggctggaggggcctac
tccaaatcgtatacactggtgtag
DBGET
integrated database retrieval system
