Oncorhynchus kisutch (coho salmon): 109905457
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Entry
109905457 CDS
T09179
Name
(RefSeq) latent-transforming growth factor beta-binding protein 4 isoform X1
KO
K08023
latent transforming growth factor beta binding protein 2/3/4
Organism
oki
Oncorhynchus kisutch (coho salmon)
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
oki04990
]
109905457
Domain-containing proteins not elsewhere classified [BR:
oki04990
]
EGF-like domain-containing proteins
hEGF / cEGF domain-containing proteins
109905457
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF_CA
cEGF
TB
EGF
hEGF
EGF_3
FXa_inhibition
Plasmod_Pvs28
EGF_2
EGF_Teneurin
Motif
Other DBs
NCBI-GeneID:
109905457
NCBI-ProteinID:
XP_020358424
Ensembl:
ENSOKIG00005011885
LinkDB
All DBs
Position
LG15:53247279..53320965
Genome browser
AA seq
2117 aa
AA seq
DB search
MSSRRYANVFVLGVTFLVFLTFSKCGTLVRRSARKGHEMQRRTAGRYQHATVNDQVYQTQ
WRMTTTSKPKLKQKQYHFNGKKYWKYATNVTLQLNGTNVCGNRCCHGWTVSPKTQKCTKP
RCLPRCHNGAVCRQPNICECRTGFYGARCEFASVTYGLVGLPWAFLRPTSPMVSTTTTLS
PTTVIPNTTPVPTETTAAWRTEGTPVSTVRWKPLTLQEAQSVLLKKALARGGRGDKMTSI
LMKHIETERKKLQSASPSDLQDTRTTSVKSFHTQKGQYTIHMSPPAARNQTAGHRGGTAA
GAGRRGAERIKVLFTPTVCKVRCTQGRCTNFCEQGNVTALYISEQGDRAALGPGFRVFLC
PMLCQNGGVCIQKDRCLCPPTFTGKFCHIPVAAPSTNDIEKPPRSPSVLASQQLLSQSEY
ILPLQSQQQSHSQPSGASGSSMVKVRVQHPPEASVKIHQVLKVGYGPGTVREQSETVTWS
AGLSGASTSVLPGERAAATPPKPRVQAQTLHGNSTNTESSVFKYCFREVRNGQCSSPLPG
LRSQDTCCRGIGLAWGINECVLCPPNTGNGVDGSCPTGFERINGTQCVDVNECLQPGFCE
NGNCVNTRGSYSCVCRQGYILDASHGICISHRVISEDKGQCYRILNSGSGRGSCSVPILR
NITKQICCCSRVGKAWGENCERCPYFGSVAFKEICPAGPGYHYSASVIQFNQRLLEQHGT
GGPPVISQSTGQTRPQQPARGGGQTPQTSHQQSSGSLTPQTRPQQPGITTLLTTPTRPQQ
PGGGALTLQTRPQQPSVEQWSSGGSLSSQGRPHIPASSVTAGPTRVVTARPLTQTQWPPV
DRRPVSPVRPAQPLPPLVTPRPPIPRPVRGVCETMPQVCGQGRCVNQPGGRHTCICNEGY
QLNAQQTRCQDIDECRASPPPCGSGRCQDTEGGYRCSCPSGYQPGPRGTSCIDIDECRQV
PNPCNNGRCENSPGSFKCVCRTGYTLEGNACKDVDECEDPLRCPVQACANSPGSYKCVSC
PPGFGLLNEQCSDVDECHQTPSLCTNGRCENTPGSYRCVCHTGYKLQGKTCTDVDECEDP
LRCPGQACVNSQGSYNCVSCKPGFSMINGHCSDIDECRQTPSPCTTGHCENTQGSYSCAC
LTGYRLHGDTCTDVDECADPSQCPGQECVNSLGSYKCVSCKPGFGLVDRHCTDVDECENA
LQCPGRECINSEGSFICVACSPGFEAGNGQCTDIDECRQTSNLCANGRCENTPGSYRCVC
RTGFKPQGSICSDLDECEDPSQCPGQRCVNSEGSYKCIACKAGHGMRDGLCADVDECQSP
DTCGAARLCVNTDGSYRCDCQPGYRTAGLGRQCRDVNECLEGEYCFPRGECVNTEGSYRC
VCSQGYTTSSDGGSCLDVDECARSGPGACQDGRCANTEGSYQCQCQVGFTTNPEKTACLD
VDECSEGAVCRSQRCENTVGSYRCITSCEPGYWVTHTGECVDINECANETVCGEHAFCQN
LIGTYQCMCDQGYTATSDGKGCVDENECETMQGVCGTARCENVDGSFMCECPGEGEEFDT
RSGQCLSTPRPGRPAYPGGSSSSSSSSTTGLGPQRRPDASQLPLARPGEFRECYYSTGEQ
SSCSVLAHNTTQQECCCTVGQGWGMGCQYDPCPPLGTAEHQALCPSGRGYVTGPGAFSYK
DVDECKLFHPEVCKSGVCVNNIPGYSCYCTIGYYYDDVFLECIDVDECEAGEDSCPGGIC
VNILGSHICTCEPPLVLDDTHRSCVNSTDLAVDENLSFCWQFVTADLVCQSPLLGGQVTF
TECCCLYGEGWGLHCALCPARDSEDYEARCNVFLGPPEFPPPFPDPYGPDPGPGPGRGGE
GGGGVGYRVPYGPDSFPDPIPRRPEYPQPDYDDYTPAGGSRSGFRSRTPSTFSVPESPYR
RPSGYIPERYYDEDDYGPPDAPPRPHFRTLPDPRSELAFGARPPPPIREGLPLSLAPLSD
SDPYSEEEEEEEGPEPWRVGPPFPPFPDRQGPGGGGGPRRVYERRYEPYAGLSTEDCGIL
HGCENGRCIRVAEGYTCDCYEGYELDMTSMACIDINECVDPDNACANGRCIDTDGSYRCV
CHQGYVMSRRPNHCVAA
NT seq
6354 nt
NT seq
+upstream
nt +downstream
nt
atgtcaagcaggagatatgctaacgttttcgttcttggagtgacatttcttgtatttctt
acattttcgaaatgtgggacactagtgaggcgttcagcccgtaaagggcacgagatgcag
aggcgaacggcgggcaggtaccaacacgcaaccgtgaatgatcaagtttatcagactcag
tggagaatgacgacgacttcaaaacccaaattaaaacagaaacagtaccattttaatgga
aagaaatactggaaatacgcaactaatgtcacacttcagttaaatgggactaacgtatgt
ggaaacaggtgctgccacggatggaccgtttcacccaagactcagaaatgcaccaaacca
agatgccttccacgttgccacaacggagccgtgtgcaggcagcccaacatctgtgaatgc
cgaacgggcttctacggggcacgctgtgagtttgcaagcgtgacctatggccttgtaggc
ctaccctgggccttcctgcgccccaccagccccatggtcagcaccaccaccaccctctca
ccaaccaccgtcatccccaacaccaccccagtgcccactgagaccacagctgcatggagg
acagaggggacaccagtcagcactgtgcgctggaaacctcttactctgcaggaggctcag
tcagtgctgctaaagaaggcattggcccgtgggggtcgaggtgacaagatgacctccatc
ctgatgaaacacatcgagacagagcggaagaagcttcaatcagcctcaccgtcagaccta
caggacacccggaccaccagtgtcaagagcttccacacccagaagggccagtacaccatc
cacatgagcccacctgcagccagaaaccagaccgccggccaccgaggaggaacggcagca
ggggcaggaaggagaggagctgagcgcatcaaggtgctcttcaccccgactgtctgcaag
gtgcgctgcacccagggacgctgcaccaacttctgcgagcagggcaatgtgaccgccctc
tacatcagtgaacagggggaccgggctgcgctgggaccgggcttcagagtcttcctgtgc
cccatgttgtgtcagaacggaggggtctgcatccagaaggaccgctgcctctgcccgcca
accttcaccggcaagttctgccacatccccgtggccgcgccctccaccaatgacattgag
aagcctccgcgcagcccctcggtgctggccagtcagcagctgctgtcccagtcggagtac
attctccccctgcagagccagcagcagagccacagtcagcccagcggtgcatctggctca
tccatggtgaaggtgcgggtgcagcacccaccagaggccagcgtgaagatccaccaggtg
ctgaaggtgggctatgggccaggcacggttagggagcagtcggagacggtcacctggtca
gcaggcctctcgggggccagcaccagtgttctgccaggggagagggccgcagccacacca
cctaaacccagagtccaggcccagaccctccacggtaactccaccaacacagaatcttct
gtgttcaagtactgcttcagggaggtccgcaacggccagtgcagctcacctctcccagga
ctcaggagtcaggacacctgctgccgagggattggattggcctggggcatcaacgagtgt
gtcctatgtccccctaacacaggaaatggagtcgatgggagctgtccgactggatttgag
aggatcaacggcacccagtgtgttgatgttaatgagtgtttgcagccaggcttctgtgag
aacggcaactgtgtgaacactcgagggagctacagttgtgtctgcaggcaaggatacata
ctggacgcctctcacgggatctgtatctcccatagggtgatctcggaggataagggccag
tgctatcgtatcctgaactctggctctggccgtggtagctgctccgtgcctatccttagg
aacatcaccaagcagatctgctgctgcagccgcgtgggcaaggcctggggagagaactgt
gagaggtgtccttactttggatcagttgctttcaaggagatctgcccagcagggcctggc
taccactactctgcctctgtcatccagttcaaccagaggttgctggagcagcacgggact
ggaggtccccctgtcatatcccagagcacgggacagaccaggccacaacaaccagccaga
ggtggtggacagactccccaaactagtcaccaacaatcttcaggctctctcactccccaa
accaggcctcaacaaccaggtatcactactctgctcaccactccgaccagaccccaacag
ccaggtggtggtgctctcacgcttcagaccagaccccagcagccatcagtggagcagtgg
agcagtggaggctccctgtcctcccagggcagaccacatattccagccagctctgttaca
gcaggacccacccgggtggtgaccgctcggcccctcactcagacccaatggcctccagtt
gaccgacggccagtatctccagtgagacctgcccagcccctcccacctctggtcacgccc
cgcccacccatccccaggccagtgcggggtgtgtgtgagaccatgccccaggtgtgtgga
cagggccgttgtgtgaaccagcccggagggagacatacctgcatctgtaacgagggatac
caactcaacgctcagcagactcggtgtcaagacatagacgagtgcagggcgtctcccccg
ccctgcggcagcggccgctgccaggacacagaagggggctacaggtgcagctgcccctct
ggataccagccgggaccccggggcaccagctgtatagatattgacgagtgtcgtcaggtt
ccgaacccctgtaacaacggccgctgtgagaatagccctggtagcttcaaatgtgtctgc
cgcactgggtacacgctagagggaaacgcatgtaaagatgtggatgagtgtgaggacccc
ttgaggtgtcctgttcaggcctgtgccaactctccaggatcatacaagtgtgtgtcttgc
ccgccaggctttggcctgctcaacgaacaatgctcagacgttgacgagtgccatcagacc
cccagcctttgcaccaatggtcgttgtgagaacactcctgggagctacaggtgtgtttgc
cacacaggatacaaactacaaggcaagacctgcacagatgtggatgagtgtgaggaccct
ttgaggtgtcctggtcaggcctgtgtcaactctcagggttcttacaactgtgtgtcctgc
aagccaggcttcagcatgatcaatggacattgctcagatatagatgagtgtcgtcagacc
cccagcccatgcaccaccggtcactgcgagaacacccagggtagctacagctgtgcgtgt
ctcactggctacagactacacggtgatacctgtacagacgtggatgaatgtgcagacccg
tcccagtgccctggccaggagtgtgtcaactccctgggctcatacaagtgtgtgtcctgc
aagcccggctttgggctggtcgacagacactgcacagatgttgacgagtgtgagaacgct
ctgcagtgtcctggtcgggagtgtatcaactctgagggctccttcatatgtgtggcctgt
agcccaggctttgaggctggaaacggacagtgtacagatatcgatgagtgtcgccagacc
tccaacctatgtgccaacggtcgctgtgaaaacactccgggtagctaccggtgtgtttgt
cgcaccgggttcaaaccgcagggcagcatctgtagtgacctggatgaatgtgaagatccc
tcacagtgtcctgggcaacggtgtgtgaattctgaaggctcctacaagtgtatcgcctgc
aaagcgggccacggcatgcgagatgggttatgcgcagatgtggatgaatgccagagcccc
gacacctgtggtgcagcgaggctgtgcgtgaacacggacggctcctaccgctgtgactgt
cagccaggctacagaaccgctggcctcggacgccagtgtagagacgtcaacgagtgtcta
gagggggagtactgcttccccaggggagagtgtgtgaacacagagggctcctaccgctgc
gtgtgctcccagggatacaccaccagcagcgacggcggctcctgcctggatgtggatgag
tgtgccaggtcaggcccgggggcgtgccaggatggccgctgtgccaacacagagggctcc
taccagtgccagtgccaagtgggattcaccaccaacccagagaagacagcctgtctggat
gtagatgagtgctcagagggagcagtgtgtcggtcacaacgttgtgagaacaccgttggc
tcctaccgctgtatcacctcctgtgagccgggctactgggtcacccacaccggagagtgc
gtcgatatcaacgagtgtgccaatgagaccgtatgcggggagcatgcgttctgccagaac
ctaattggaacataccagtgcatgtgtgaccagggctacacagccaccagcgatgggaag
ggatgtgtggatgaaaacgagtgtgagactatgcagggcgtgtgtggcacggcgcgctgt
gagaatgtggatggctccttcatgtgtgagtgtccaggagagggggaagagtttgatacg
cgctcaggacagtgcctcagcacgccccgaccaggtcgtccggcgtaccctggcggctcc
tcctcttcttcgtcttcctccaccaccggtctcggtccccagcgtcggcccgatgcgtcc
cagctgccccttgcccggcctggcgagttcagggagtgttactacagcaccggggagcag
agctcgtgcagcgtcctggcccacaacaccacccagcaggagtgctgctgcaccgtgggc
cagggctggggcatgggctgccagtacgacccctgtcctccgctaggcacagccgagcac
caggcgttgtgccccagcggacgaggatatgttaccgggccaggagcatttagctacaaa
gatgtggatgagtgtaagctgttccaccctgaggtgtgtaagagcggtgtatgtgtcaac
aacatccctggctactcctgctactgcaccattggctactactacgacgacgtgtttctg
gagtgcatcgatgttgatgagtgtgaggcaggggaggacagctgtccagggggaatctgc
gtcaacatattaggctcacacatctgtacctgcgagcctcctcttgtgttggacgacact
catcgcagctgtgtcaattccactgacctcgccgtggatgagaacctatcgttctgctgg
cagtttgtcacagcagacctggtgtgtcagagccccctgctgggtggacaggtcaccttc
actgagtgctgctgtctgtatggagagggctggggactgcattgtgctctgtgtcctgcc
agagactcagaggactatgaggctcgctgtaacgtcttcctggggcccccagagtttcct
ccccccttccctgacccctacgggccggacccagggccaggacccggcagaggaggagag
ggaggaggaggggtggggtatcgcgtgccctatggaccggactccttcccagaccccatc
ccccgcaggcctgagtacccccagcctgactatgacgactacacaccagcggggggcagc
aggtctggcttcagaagcagaacgcccagcaccttcagcgtcccagagagcccatacaga
cggccctcaggatacattcctgagcggtactatgacgaggacgactatggcccgcctgac
gctcctccgagaccccatttccggaccctcccagaccctcgttctgagcttgcctttggg
gcgcgaccccctccccccatccgagagggcctccctctgagtctggcccccctctcggac
agtgacccctacagtgaggaggaggaggaggaggaggggccagaaccctggcgtgtggga
ccccctttccctccgttccctgacagacaggggccaggtggtggtggtggcccacggaga
gtctatgagagacgatatgagccgtatgcaggcctgagcacagaggactgtgggatactg
cacggctgtgagaacggcaggtgtatccgggtggcggagggatacacgtgtgactgctac
gagggctacgagctggacatgacctccatggcctgcatagacatcaatgaatgtgtggat
cctgacaacgcgtgtgcgaacggccgatgcatcgacacagacggctcctatcgctgtgtg
tgccaccagggctacgtcatgtcccgccggcccaaccactgtgtggcagcataa
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