Oncorhynchus kisutch (coho salmon): 109905496
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Entry
109905496 CDS
T09179
Name
(RefSeq) gem-associated protein 4-like
KO
K13132
gem associated protein 4
Organism
oki
Oncorhynchus kisutch (coho salmon)
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
oki03041
]
109905496
Spliceosome [BR:
oki03041
]
Other splicing related proteins
Proteins involved in snRNP biogenesis
SMN complex factors
109905496
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Abhydrolase_8
Motif
Other DBs
NCBI-GeneID:
109905496
NCBI-ProteinID:
XP_020358483
Ensembl:
ENSOKIG00005035359
UniProt:
A0A8C7MVL1
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Position
LG15:complement(54425530..54432630)
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AA seq
1088 aa
AA seq
DB search
MMTQDSWLSCEKTAILQGGFLLANRLCQPASLSALQKEDWSKVGHPILQAVREICGQERG
SCLSSVRWKKKIICVLWSKLLGKESEEDMEIGWRENPFFSLQNSLPDINRIVLFELVKLT
GFSQIYAQLLLCLPSAHLSAELGELVQHVTRNSTEEDVCVLLEVWWELWKGRWGRQEEDD
LDKVFTNRWTSLTNTTGLSPQAAKRFKSDPETSTSSSSTTDVLSILFHALEEMKEHLSTS
DLCYRALTNCLDSLYTSHLIDQAIILPAEVQLQSLTSTVTVRKRHAGIEKFDLVQVISEA
RSDLKAAHTPSLFKPCGMTLMQALQTVSQLTQAWEKRGLLEMTASGDPSDLTCRLKNSLA
RVLESLEERSMSETMDEGERQILNNVQSTLRGLFVSLSFPDTESNAGEMAHIAVAIINHR
LEGFQDFTMIFATELSWSLSMEEWISCLERNKNAFQRKDIVMKLVSTLIAKCQMDSEVEH
CRKLKDIIVNIFAELPLTEKNTTLAEMLTCSKRGLQGSLPLAVMEGFSEELNMTFNCIIQ
GGAVQNNLSLAVAAIARVAFQNPEATLRRCCHLAVVNHGAHSLLSNILQQLPGLRGGAPG
CTDGTGSSAGSLLCSCLQDTAMTKLSSAKEEDQFLHFLVALMQPSISESLERGQSFLHPE
EVVCAFVLPHLSPSSGYSTCSLELCLRLLHSAFSLETQDPSPHWVMNCSPFPLLYVLCQI
LNEGCRCWELPVEGAPCHLSTESKEMLVTVLTALGKVVGREVASAPNTWSRALFWLYNKV
EALDWTVRFHLKVVWGDHFKNEVPSSLLAVCELPEQEWSGLKLAQYGQGTGLLAWMECCA
LSDEVQNTMLTSLALDQHRPDDVNMFSKGLLVAVTQTLPWCTVAEWGRLLRAMRELLRSG
RLHVPYSLEYVDFLPLLDLRPFSCELRLSVLLLRVLQLLCGSSCKDWLPGQGWAHVGLLY
ASAMREVIDSLRGKLSPSSSNTSPKDSKVERAATTTASQEVLFVLSQLFCHVQHVQVMMP
GGQCESLFLCALEILTHYEAVLATHPSSSSHLEIENTRHFFTTITDNLESAEMKAVLHQK
IAQLSSSG
NT seq
3267 nt
NT seq
+upstream
nt +downstream
nt
atgatgactcaagattcctggctgagctgtgagaagactgccattctccagggaggcttt
ctgttggccaacagattgtgccagccagcgtcactcagtgccctgcagaaggaggactgg
agtaaggttggccacccaattctacaggctgtcagagaaatttgtgggcaggagcgtggt
agctgtctgagcagtgtccgctggaagaagaaaatcatctgcgtcttatggagcaaatta
ctggggaaggagagtgaagaagacatggaaatcggctggagggagaatccattcttctct
ctgcagaacagcctacctgacattaaccgcatagtgctgtttgagctggtcaagttaaca
ggtttctctcagatctacgcccagctgctgctttgcctcccatcggcccacctgagtgca
gagctgggggagctagttcaacacgttacccgaaacagcactgaggaggatgtctgcgtc
ctgctggaggtgtggtgggagctgtggaagggcaggtggggaaggcaagaggaggacgac
ctagataaggtctttactaaccggtggaccagcctcaccaacaccaccggcctttcacct
caggctgccaagaggttcaaatcagacccagaaacctcaacatcatcatcgtccaccact
gatgtgctgtccattctttttcatgctctggaggagatgaaagagcatctgagcacctct
gacctttgctaccgtgccctaaccaactgcctcgactccctgtacacctcacatctgata
gaccaagctatcatcctcccagctgaggtacaacttcagagcctgaccagtacggtgact
gtcagaaagaggcatgctgggatagagaagtttgacctggtccaggtgataagcgaggcc
cgcagtgacctgaaggcagcccacacaccctctctgtttaaaccctgtggaatgacacta
atgcaagccctgcagacagtctcacagctcactcaggcctgggagaagagagggctgctg
gagatgacagccagcggggaccccagtgacttgacatgtcgtttgaaaaacagtctggcc
agagtgctcgagtccctagaggaacggtccatgtctgagaccatggatgagggtgagcgg
cagatactgaacaatgtgcagagcactttgagaggcttgtttgtctcactgtccttcccc
gacacagagagcaacgctggggaaatggcccacattgccgtagccatcattaaccaccgc
ttggagggcttccaagatttcactatgatatttgccactgaactgagctggtccctgagc
atggaggagtggatcagctgtctggagagaaacaaaaacgcattccagcgaaaggatatt
gtcatgaaattagtctccactctcattgcaaagtgccaaatggatagtgaagtagagcac
tgcagaaagctgaaggacattattgtgaacattttcgcagagctccccttaactgagaaa
aacacaacattagcggaaatgttaacctgctccaagaggggtctccagggctctctgccc
ctggctgtgatggagggctttagtgaggagctcaacatgacgttcaactgcatcatccag
gggggagcggtgcagaacaacctcagcttggccgtggccgccatagcccgcgtggccttt
cagaacccagaggccaccctgcgtcggtgctgccatctggcggtggtgaaccatggggcc
cacagcctcctctccaacatactccagcagctcccagggctgaggggcggtgcccccggt
tgcacagacgggacgggcagctctgcggggagcttactgtgcagctgtcttcaagatact
gccatgactaaactgtcctcggctaaggaggaggaccagttcctgcacttcctggttgca
cttatgcagccgagcatttcggagagcttagagcgaggccagagtttcctgcaccctgaa
gaggttgtgtgtgcctttgtcctgcctcacctctccccctcctctggctatagcacctgc
agcctggagctgtgcctgcgtttgctccactctgccttttctctggaaacccaggatcca
tctccacactgggtcatgaactgctccccattccccctcctctacgtcctctgccagatt
ctgaatgagggctgcaggtgctgggagcttcctgtagagggtgcaccctgtcacttatcc
acggagtccaaggagatgctcgtcactgtgctgactgcactgggcaaggtggtgggacgg
gaggtggcctcagcccccaacacctggtccagagccctcttctggctctacaataaagtg
gaggccctggactggactgttcgcttccatctgaaggtagtgtggggggatcacttcaaa
aacgaggtgccgtcctcactgttggctgtgtgcgagctgccggagcaggagtggtctggc
ctaaagttggcccagtatgggcagggcacagggctgctggcgtggatggagtgctgcgct
ctctctgacgaggttcagaacaccatgctgacctctctggctctggaccagcaccggccc
gacgatgtcaacatgttcagcaaaggcctgctggtggcagtgacacagaccctaccctgg
tgcaccgtcgccgagtggggcaggctcctgagagcaatgcgagagctgctccgctcaggc
cggctccacgtgccttactcactggagtacgtggactttctccccctgctggacctgcgg
ccgttctcctgcgagctgcgtctgtccgtgctactgctgcgtgtcctccagctgctctgc
ggctccagctgcaaagactggctgcccggccagggctgggcccacgtggggctgctgtac
gccagcgccatgagagaggtcatagactccctgaggggaaagctgtcgccgtcttcctcc
aacacctcacccaaagactcaaaggtagagagggcagctaccaccactgccagccaggag
gtgctgtttgtactgagccagctcttctgtcatgttcagcacgttcaggtgatgatgccc
ggcgggcagtgcgagtctctgttcctgtgtgccctggagatcctgactcactacgaggca
gtgctggccacacaccccagcagcagctcccacctggagattgagaacactcgccacttc
ttcaccactatcacagacaacctggagagcgccgagatgaaggccgtgttgcatcagaaa
attgctcagctgtcgtcttcgggttga
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