Oncorhynchus kisutch (coho salmon): 109905585
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Entry
109905585 CDS
T09179
Name
(RefSeq) E3 ubiquitin-protein ligase TRIP12-like isoform X1
KO
K10590
E3 ubiquitin-protein ligase TRIP12 [EC:
2.3.2.26
]
Organism
oki
Oncorhynchus kisutch (coho salmon)
Pathway
oki04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
109905585
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
oki04121
]
109905585
Enzymes [BR:
oki01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
109905585
Ubiquitin system [BR:
oki04121
]
Ubiquitin ligases (E3)
HECT type E3
109905585
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
WWE
Motif
Other DBs
NCBI-GeneID:
109905585
NCBI-ProteinID:
XP_020358625
Ensembl:
ENSOKIG00005042635
LinkDB
All DBs
Position
LG15:58134339..58178892
Genome browser
AA seq
2056 aa
AA seq
DB search
MSNRPNSNPGGSLRRSQRNTAAAQPQDHTVAGRLQSEQVKHKANSPPESRRSKSKASRAA
PSSASGQSRGHSSRSSLSLSVASFVLQGDPEAAGTSEREPIGHQSKTEGTTRGLKRNSAP
DLNTYTPAKKSKSNPPPRDHTTEAKKGPAKSSKKRPVAPELPTGRGQSKKSGASGASPTL
KRNKADSLPCLSSTAGSLPNRTDGRFAKPTKLASKSAASAKAGCSTVTDSSSSASTSSSS
STGTNSATATQGARLKQGKDQNKARRSRSASSPSPRRSTRDKEQAKAAVSSKFEWAARFS
PKVNLPKPKLSLPSSSKTETASKPGPSGLQAKLASLRKSTKKRSESPPAELPSFRRSTRQ
KTTGSCASTSRRGSGLGKRGAAEARRQEKMADSDNNQDGANSSAARTDEAPQGASGTASS
SVAGAVGMTTSGESESDDSEMGRLQALLEARGLPPHLFGPLGPRMSQLFHRTIGSGASSK
AQQLLQGLQATGDESQQLQAAIEMCQLLVMGNEETLGGFPVKSVVPALMTLLQMEHNFDI
MNHASRALTYMMEALPRSSAVVVDAIPVFLEKLQVIQFIDVAEQALTALEMLSRRHSKAI
LQAGGLADCLLYLEFFSINAQRNALAIAANCCQSITPDEFHFVSDSLPLLTQRLTHQDKK
SVESTCLCFARLVDNFQHEENLLQQVASRDLLTNIQQLLVVTPPVLSSGMFIMVVRMFSL
MCSNCPCLAVQLMKQNIAETLRFLLCGAANGSCQEQIDLVPRSPQELYELTSLICELMPC
LPREGIFAVDLMLKKGSAQATEGAIWQWRDDRGLWHPYNRIDSRIIETAHQNGEDEISLS
TLGRVYTIDFNSMQQINEDTGTARGIQRKPNPLANPTTGGHQEVRREDARAQLMKEDPEL
AKCFIKTLFGVLYEVYSSSAGPAVRHKCLRAILRIIFFADAELLKDVLRNHAVSSHIASM
LSSQDLKIVVGSLQMAEILMQKLPDVFSVFFRREGVMHQVKNLAESEAFLTSPPKACTSG
TASLCTTTISTANTTAATTATPDLGSPSFQHSMDDSLDLSPQGRLSDVLKRKRLPKRGPR
RPKYSPPRDDDKVDNQAKSPTTTQSPKSSFLASLNPKTWGKLGAQTNSTNSEPSRTASVS
GLARALPKDSVSNNRDKIKAWIKEQACKFVARYFNNENIDGSNPALNVLQRLCTATQQLS
LQMDGGVECLVEICSIVSESDVSSFEIQHSGLVKQLLLYLTSSSDRDLVSRDVRLKRFLH
VFYGCPTPGMEPAGRLEPFENGPLLSLVRKMNNCLSQMEQFPVKVHDFPSGNGNGSRGSQ
ALKFFNTHQLKCQLQRHPDCTNVKQWKGGPVKIDPLALVQAIERYLVVRGYGRIREEDED
SDDDGSDDEIDESLAAQFLNSGSVRHRLQFYIGDHLLPYNMTVYQAVRQFSLQAEEERES
TDDEANPLGRAGIWTKTHTIWYKPVREDEDGTKDVVGGKRGRAQTAPTKTSPRNAKKQDE
LWHDGVCPSVASPLEMYLMSEPPESITFDDPSLDVNLLLRVLHSISSYWFYLYDNAVSKE
IIPTSEFINSKLTAKANRQLQDPLVIMTGNIPSWLTELGKTCPFFFPFDTRQMLFYVTAF
DRDRAMQRLLDTNPEINQSDSQDSRVAPRLDRKKRTINREELLKQAESVMQDLGSSRAML
EIQYENEVGTGLGPTLEFYALVSQELQRADLGLWRGEEVALSNPKGSQEGTKYMFSSRGL
FAVPFGRTTKPAHIAKIKMKFRFLGKLMAKAIMDFRLLDLPLGLPFYKWMLRHETSISSH
DLINIDPGVAKSIQHLEDIIRQKRRLEQDRSQTRETLQQALESLNMNGCSVEDLGLDFTL
PGFPNIELKKGGKDIPVTIYNLEEYLRLVVYWTMNEGVSRQFESFREGFESVFPLHHLQY
FYPEELDQLLCGSKSETWDVKTLMECCRPDHGYTHDSRAVRFLFDVLSSFDAEQQRLFLQ
FVTGSPRLPVGGFRSLNPPLTIVRKTFESTENPDDFLPSVMTCVNYLKLPDYSSIEIMRK
KLLIAAREGQQSFHLS
NT seq
6171 nt
NT seq
+upstream
nt +downstream
nt
atgtccaaccggcctaattccaatccaggggggtcactgcgccgttcacagaggaacact
gctgcggcccagccacaagaccatacagtcgcaggaaggttgcagtcagagcaggtaaaa
cataaagcaaattcccctcctgaaagtagaagatctaaatctaaggcttccagagccgca
cccagctcagcctctggccagtccagagggcacagctcaagaagcagtctgtcactgtct
gtggcttcatttgtgctgcaaggcgacccagaggccgcaggtacatcagagcgagagcca
ataggacaccaatccaagactgaaggcaccacccgagggttgaagagaaattctgcacct
gaccttaacacctacaccccagccaagaagtcaaaatccaaccccccacccagagaccat
accactgaggccaagaaaggccccgccaaatcctccaagaagagacccgtggctccagag
ctgcctacaggccgcggccagagcaagaagagcggggcctctggggcttcaccgactctt
aaacggaataaggctgactccctcccctgtctgagcagcactgctgggtcgctccccaac
cgtaccgacggcagatttgcaaaacccaccaagctggcgtcgaagtcggccgcctcagcc
aaagctgggtgtagcactgtgactgactcctcctcttctgcctccacctcttcttcctcc
tccacaggcaccaacagtgctaccgccacacagggtgccaggctcaagcagggcaaagac
cagaacaaggcacgtcgttcccgctccgcctcgagcccctctccacgccgaagcacccgc
gacaaggagcaggccaaagccgccgtctcgtccaagtttgagtgggcggcccgcttcagt
cccaaggtcaacctgccaaagcccaaactgtccctacccagctcctccaagacagagacc
gcctctaaacctggaccctcaggactacaagccaaactagcaagtttgaggaagtccact
aagaagcgcagcgagtctcctccagcagagctccccagctttcggcggagcacacgccag
aagaccacgggctcctgcgccagcaccagtcggcgaggctcaggcctgggcaagcgcggg
gcagccgaagctcgccgacaagagaagatggctgactcggacaacaaccaggatggggcc
aactcctcggctgcccgcactgatgaggccccgcagggggcttcgggtacagcttctagc
tcagtggccggagctgtagggatgaccacatccggtgagagtgagtccgatgactctgaa
atgggcagactccaagccctgctggaggccaggggtctacccccacacctctttgggccc
ctgggaccccgcatgtcccagctgtttcacagaactataggcagtggagccagctccaag
gctcagcagctgctgcagggcctgcaggccaccggcgacgagtcccagcagctccaggcc
gctatcgagatgtgccagctgctagtgatgggcaacgaggagacactaggaggcttcccc
gtgaagagcgtggtgcctgctctgatgacattgttacagatggagcataactttgacatt
atgaaccacgcctcccgtgctctcacttacatgatggaggcgctgcctcggtcctctgct
gtggtcgtggatgccatccccgtcttcctggagaagcttcaggtgattcagttcattgac
gtggcggagcaggccctgactgccttggagatgttgtcaaggcgacacagcaaagccatc
ctgcaggctggtggcctagctgactgtctgctgtacctggagttcttcagcatcaacgcc
cagaggaatgccctggccattgcagccaactgctgccagagcatcacccctgatgagttc
cactttgtgtctgactctctgccactgctgacccagagactcacacaccaggataagaaa
tccgttgaaagcacttgtctctgttttgccaggctggtggacaactttcaacacgaggag
aacctgctacagcaggtggcctcgcgggacctgctgaccaacatccagcagttgctggtg
gtcaccccgcccgtgctcagctcaggcatgttcatcatggtggtgcgtatgttctccctc
atgtgctccaactgcccctgtctggccgtgcagctcatgaagcagaatattgcagagact
ctgcgtttccttctgtgcggagcggccaacggtagctgccaggagcagattgacctggtg
ccccggagcccccaggagctctatgaactcacctcgctcatctgcgagctgatgccctgc
ctgcccagagagggcatctttgctgtggatctcatgctgaagaagggcagtgcacaggcc
acagagggggccatctggcagtggagggacgaccggggcctgtggcacccctacaaccgc
atcgacagccgcatcattgagacggcccaccagaacggagaggacgagatcagcctgtcc
accctgggccgcgtctacactatcgacttcaactctatgcagcagatcaacgaggacact
ggcacagcacggggtatccagaggaaacccaaccccttagccaaccccactactgggggt
caccaggaggtgaggcgggaggatgcacgggcccagctgatgaaggaagaccctgagctg
gccaagtgcttcattaagaccctttttggggtgctgtacgaggtgtacagctcgtcggca
ggccctgcagtcagacataagtgcctccgagccatcctcaggatcatcttcttcgccgat
gccgagctcctcaaggacgtgctgaggaaccacgcggtgtccagtcacattgcctccatg
ctgtccagccaggacctgaaaattgtagtgggctctctgcagatggctgagatcctcatg
cagaagctgcctgacgtattcagtgtcttcttcagaagagaaggtgtgatgcaccaggtg
aagaacctggctgagtcggaggccttcctcactagtcccccgaaggcgtgcaccagcggc
acggctagcctgtgtaccaccaccatcagcactgcaaacactacggcggccaccaccgcc
accccagacctgggctcacctagcttccagcacagcatggacgactcactggacctcagc
ccacaggggcggttaagtgatgtgctgaagagaaaacgtctgcctaagagagggcccaga
aggcccaagtactctcctcccagagacgacgacaaagtagacaatcaggccaagagtcct
accactactcagtcccccaaatcctccttcttggccagtctgaaccccaagacctggggc
aagctgggcgcccagaccaacagcacaaactctgagccctctcgcacggccagtgtgagt
ggcctggcacgcgcccttcccaaggactcggtctccaacaacagggacaagatcaaggct
tggatcaaagagcaggcctgtaagtttgtggcacgctacttcaacaatgaaaacattgat
ggcagcaaccctgcactaaatgtactccagagactctgcaccgccacgcaacagctcagc
ctacagatggacggtggcgtggagtgcctcgtggagatctgcagcatcgtgtcggagtcg
gacgtgtcgtcgttcgagatccagcacagcggcctggtcaagcagctgctgctctacctg
acctccagcagtgaccgtgacctggtcagccgtgacgtccgcctcaagaggttcctgcac
gtcttctacggctgcccgaccccggggatggagccggcaggccgtctggagccgtttgag
aacgggcccctgctgtcactggtgcgcaagatgaacaactgcctaagccagatggagcag
ttccctgtcaaggtgcacgacttccccagtggcaacggcaacgggagcagaggttctcag
gctctgaagttctttaacacgcaccaactcaagtgtcagctgcagaggcacccggactgc
accaatgtgaagcagtggaaggggggcccggtgaaaattgaccccctggctttggtacag
gccattgaacgctacctggtggtccgaggttacggacgaataagagaggaggatgaggac
agtgacgatgatggttcagacgatgaaattgatgaatctctggcggcccagttcctgaac
tcaggcagtgtgcgccaccggctgcagttctacatcggcgaccacctgctgccctacaac
atgacggtttaccaggcggtgcggcagttcagcctgcaggcagaggaggagagggagtca
acagatgacgaggccaacccgctcggacgggccggcatctggaccaaaacccacaccata
tggtataagccagtgagggaggatgaggatggcacgaaggatgtggtgggagggaagagg
ggccgggcacagactgcccccaccaagacctcgccccgcaatgccaagaaacaggacgag
ctgtggcacgacggcgtgtgtcccagcgtggccagcccgttggagatgtacctcatgtca
gaacccccagagagcatcaccttcgacgacccgtctctggatgtcaacctgttgctgagg
gtgctgcactccattagtagttactggttctacctgtacgacaatgctgtttctaaggag
atcatccccaccagtgagttcatcaacagtaagctgacagccaaggccaaccgacagctg
caggaccctctggtcatcatgaccggcaacatcccctcctggctcacagagctcggcaag
acctgtcccttcttcttcccattcgacacacggcagatgctcttctatgtgactgctttt
gaccgcgaccgggccatgcagcgcctcctcgacaccaatcctgagatcaaccagtcagat
tcccaggacagccgtgtggcgccccgcctcgacagaaaaaagcgaacaataaaccgtgag
gagctgctgaagcaggcggagtcagtgatgcaggacctcggcagctccagagccatgctg
gagattcagtatgagaacgaggtgggcacagggctgggtcccaccctggagttctacgcc
ctggtctcccaggagctgcagagggccgacctcgggctgtggaggggtgaggaggtcgcc
ctgtccaacccaaaaggaagccaagaagggaccaagtacatgttcagctcaagagggctg
tttgccgttccctttggcaggacaaccaaaccggcacacatcgccaaaatcaagatgaag
ttccgcttcctgggcaagctgatggcgaaggctataatggacttcagactgctggacctg
cccctagggctgcccttctacaagtggatgctgcggcacgagacgtccatcagctcccac
gacctgatcaacattgacccgggtgtggccaaatccatccagcacctggaggacatcatc
cgccagaagagaaggctggagcaggaccgctcccaaacgagggagaccctgcagcaggcg
ctcgagagtctcaacatgaacggctgctctgtggaggatctgggcctggactttaccctc
cccggtttccccaacatcgagctgaagaagggaggcaaggacatccctgtcaccatctac
aatctggaggagtacctcaggctggtggtctactggacgatgaacgaaggtgtgtcccgg
cagtttgaatctttcagggaagggtttgagtcagtcttccccctgcatcacttgcagtat
ttctaccctgaagagttggatcagctgctttgtggcagcaagtccgagacctgggacgtc
aagaccctgatggagtgctgtcgtcccgaccacggctacacgcatgacagtcgtgctgtg
aggttcctgtttgacgtgctcagcagtttcgatgcagagcagcagagacttttcctgcaa
tttgtaacaggaagcccaaggctgcctgttggaggtttccgtagtctgaacccgccgctg
accatcgtgcggaagacatttgagtcgacggagaacccggatgacttcctgccgtcggtt
atgacctgtgtcaactacctgaagctgcctgactactccagcatcgagataatgcgcaag
aaactgttgattgcggcccgtgagggccagcagtccttccacctgtcctga
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integrated database retrieval system
