Oncorhynchus kisutch (coho salmon): 109905665
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Entry
109905665 CDS
T09179
Name
(RefSeq) lissencephaly-1 homolog A
KO
K16794
platelet-activating factor acetylhydrolase IB subunit alpha
Organism
oki
Oncorhynchus kisutch (coho salmon)
Pathway
oki00565
Ether lipid metabolism
oki01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09100 Metabolism
09103 Lipid metabolism
00565 Ether lipid metabolism
109905665
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
oki03036
]
109905665
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
oki04147
]
109905665
Chromosome and associated proteins [BR:
oki03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
109905665
Exosome [BR:
oki04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
109905665
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
EIF3I
WDR55
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_EML_2
Beta-prop_WDR75_1st
Beta-prop_TEP1_C
Beta-prop_EIPR1
Beta-prop_WDR90_POC16_2nd
ANAPC4_WD40
WD40_MABP1-WDR62_1st
Beta-prop_IFT122_1st
NBCH_WD40
Beta-prop_SCAP
Beta-prop_Vps41
Beta-prop_Nup120_160
Beta-prop_DCAF4
Beta-prop_EML
WDR90_beta-prop_4th
LisH
WD40_RFWD3
Beta-prop_SPT8
LisH_PAC1
Beta-prop_DCAF12
Beta-prop_IFT140_1st
Beta-prop_RIG_2nd
eIF2A
Beta-prop_WDR35_TULP_N
Nucleoporin_N
Beta-prop_NUP159_NUP214
Pox_A_type_inc
Beta-prop_WDR11_2nd
ARMC9_LisH
DUF2570
LisH_2
SutA-RBD
Motif
Other DBs
NCBI-GeneID:
109905665
NCBI-ProteinID:
XP_020358770
Ensembl:
ENSOKIG00005019464
UniProt:
A0A8C7GTQ8
LinkDB
All DBs
Position
LG15:63771132..63834107
Genome browser
AA seq
410 aa
AA seq
DB search
MVLSQRQRDELNRAIADYLRSNGYEEAYSTFKKEAELDVNEELDKKYAGLLEKKWTSVIR
LQKKVMELESKLNEAKEEITLGGPIAQKRDPKEWIPRPPEKYALSGHRSPVTRVIFHPVF
SVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDQTGKLLASCSADMTIKLWDFQ
GFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVATGYCVKTFTGHREWVRMV
RPNQDGTLIASCSNDQTVRVWVVASKECKAELREHEHVVECISWAPESAHPTILEATGSE
SKKSGKPGPFLLSGSRDKTIKMWDVSIGMCLMTLVGHDNWVRGMLVHPGGKFILSCADDK
TLRIWDYKNKRCMKTLSAHEHFVTSLDFHKNAPYVVTGSVDQTVKVWECR
NT seq
1233 nt
NT seq
+upstream
nt +downstream
nt
atggttctgtcacaacggcaacgagacgaactaaatcgagcgatagctgattaccttcgt
tcaaatggatatgaagaggcatattcaactttcaagaaggaggcagaattagacgtgaat
gaagaattggataagaagtatgccggccttttggaaaagaaatggacctcagtcatcaga
ttacaaaagaaggtgatggagctggagtcgaagctgaacgaggccaaggaggagatcacc
ctaggtgggcccatagcccagaagcgtgaccccaaagagtggatccctcgcccgccggag
aagtacgcactgagtggccaccgctcccctgtcacacgcgtcatcttccacccggtcttc
agcgtcatggtgtccgcctccgaggacgccacaataaaggtgtgggactatgagacggga
gactttgagcggacgctgaagggccacactgactctgtccaggacatctcctttgaccag
actggcaagctgctggcctcctgctctgcagacatgaccatcaagctgtgggacttccag
ggctttgagtgcatcagaaccatgcatggacacgatcacaatgtttcgtccgtagccatc
atgcccaatggagatcatatagtatctgcctctagggacaaaaccattaaaatgtgggag
gtggccactggttactgtgtgaagacgttcacgggccacagggagtgggtgaggatggtc
cggcccaatcaggatggcaccctgatcgccagctgctccaatgaccagactgtgcgtgtg
tgggtggtggcgtccaaagagtgcaaggccgagctgcgggagcacgaacacgtggtggag
tgcatctcctgggcccctgagagcgctcatcccaccatcttggaagccaccggctcagag
tctaagaagagtggtaagccgggccccttcctgctgtctggctccagagacaagaccatc
aagatgtgggacgtcagcattgggatgtgccttatgacactggttggccatgataactgg
gtgcgcgggatgcttgtccaccccggaggcaagttcatattaagctgtgctgacgacaag
accttaaggatctgggactacaagaacaagcgctgcatgaagactctgagtgcccatgaa
cactttgttacctctctggatttccacaagaatgcgccgtatgttgtcaccgggagcgta
gatcaaacagtaaaagtgtgggagtgtcgctga
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