Oncorhynchus kisutch (coho salmon): 109905698
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Entry
109905698 CDS
T09179
Name
(RefSeq) transcription elongation factor SPT6-like
KO
K11292
transcription elongation factor SPT6
Organism
oki
Oncorhynchus kisutch (coho salmon)
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
oki03021
]
109905698
03036 Chromosome and associated proteins [BR:
oki03036
]
109905698
Transcription machinery [BR:
oki03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
109905698
Chromosome and associated proteins [BR:
oki03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
Other Histone chaperones and regulators
109905698
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SH2_2
YqgF
HHH_7
HTH_44
Tex_central_region
SPT6_acidic
Spt6_S1
HHH_3
S1
S1_RRP5
HHH_9
SH2
Tex_N
Tex_YqgF
Motif
Other DBs
NCBI-GeneID:
109905698
NCBI-ProteinID:
XP_031646686
Ensembl:
ENSOKIG00005040793
LinkDB
All DBs
Position
LG15:65123369..65159703
Genome browser
AA seq
1738 aa
AA seq
DB search
MDFIEREAEESEEEFGCPEDTEKKALKHAAANDDEEEEEENTEDQDADGNLCGLIDDGVE
EGEGEEEDEEEGNKDKEGDSDSGEEIGHRKRKRSFDDRLDDDDIDLIEENLGVKVKRQKF
RRLRDMSDDEDEEGDEDVREAHEKDMIADEIFMGTGADEGEALDVPLHPGEDEEEDDEES
DIDDFIVDDDGQPLKKPKWRKKLPGYTDAALQEAQEIFGGDFDFAEFDTEAYEDAEEEEE
DADEESWDRPKKQAKKRVGRRSIFEIYEPSELESSHMTDQDNEIRSTDMPERFQLRSTRV
KPAEDDELEQEAEWIYRNAFSTLTISMQENADYLDRGPTTTFSRKGPSTIQKIKEALNFM
RNQHFEVPFIAFYRKEYVEPELNINDLWKVWQWDEKWTQLKTRKQNLRRLFQKMQGYQFE
QISADPDKPLADGIRPLDTSDLERLKDVQSSDELGDVYNHFLLYYGRDIPKMQNAARSSK
KKMKKIKVDEDGNEQEVEEEEEEEEEQSKGPDLKLASRRDMYSICQCAGLDGLAKKFGLT
PEQFGENLRDSYQRHETEQFPAEPMELAKDYICSQFSTAEAVLEGTRYMVAMQIAREPLV
RHVLRQTFQERAKINIKPTKKGKKDVDEAHYGYSFKYLKNKPVKELNGDQFLKMFQAEEE
GLLTINICIDLIGVKGYGGDQAYYEEIKQFYYRDEFSHQVQEWNRQRTLAIERSLKQFLY
PQMAKELKNKLIAEAKENIIKACSRKLYNWLKVAPYRPDQQVEEEDEELMSEAHGKGIRV
LGVAFSSSRDTPVFCALVNGDGEVGDFLRLPYFLKRRNAWREDEREKKIHDIETLKKFLN
SKKPHIIAIAGENRDAQMVIEDIKRTASELEQESSFPTIGVELVDNELAMLYMNSKKSEA
DFRDYPPLLRQAVSVARKIQDPLVEYAQVCSSDEDILCLKLHPLQEHVVKEDLLNALYCE
FINRVNEVGVDVNRAMAHPYTQSLVQYVCGLGPRKGSHLLRILKQNNTRLENRTQLVTMC
HMGPKVFINCAGFIKIDTASLGDSTDSYIEVLDGSRVHPETYEWARKMAVDALEYDESAE
DANPAGALEEILENPERLKDLDLDAFAEELERQGYGNKGITLYDIRAELSCRYKDLRSTY
RGPNTEEIFNLLTKETPETFYIGKLITSVVTGIAHRRPQGESYDQAIRNDETGLWQCPFC
QQDNFPELSEVWNHFDSGSCPGQAIGVRCRMDNRVTGFIPTKFLSDKVVKHPEERVKVGM
TVHCRIMKIDIEKLSVDLTCRTSDLSDKNNEWKLPKDTYYDFDTETEDVKQEEEAKKKQQ
RTTYIKRVIAHPSFHNINFKQAEKMMESMDQGDVIIRPSSKGENHLTVTWKVADGIYQHI
DVREEGKENAFSLGHTLWINTEEFEDLDEITARYVQPMAAFARDLLGHKYFQECNGGDRK
KMEEVLVKSKKEKPTFIPYYVSACRELPGKFLLGYQPRGKPRVEFVTVTPEGFRYRGQIF
PTVNGLFRWFKDHFQEPVAGITPSSSSRTRTPASVNATPANINIADLTRAVNALPQNMTS
QMFSAIAAVTGQGQNPNTTPAGWASSQYGYTGGSSGGGGSSSAYHVFATPAQQPIATPLL
TPSYSYTTPTPSQQQTITTPQYPSSTPQSSHGHGHRPSSSTPSSTSSSRHHRTPTSKATS
HTAVDWGKMAEQWLQEKEAERKKTRPRMTPRPSPSPMIESTPMSLAGDATPLLDEMDR
NT seq
5217 nt
NT seq
+upstream
nt +downstream
nt
atggatttcatcgagagggaagcagaggagtctgaggaggaatttgggtgtccagaggac
acagagaaaaaggcactgaagcatgctgcagcaaatgatgatgaggaggaggaagaggag
aatacagaggatcaggatgcagatggaaacctctgtggtctgattgatgatggtgtggag
gaaggggaaggggaggaagaggatgaggaagaagggaataaagataaagaaggtgatagt
gactctggggaggaaattggacaccgtaagaggaagagaagctttgacgaccgcttggat
gatgatgatatcgatctcattgaggagaatttgggagtaaaagtgaaaaggcaaaagttc
cgtcgtttgcgagacatgtcggatgatgaggatgaggagggagatgaagatgtcagggag
gcccatgagaaggacatgatagcggatgagatcttcatggggacgggagcggatgagggt
gaggcattggatgtgcctttgcatcccggggaggatgaggaggaggatgatgaagagtct
gatatcgatgactttattgtggatgatgacggacagcccttgaaaaaacccaagtggagg
aagaagctgccaggatatacagatgcagcccttcaggaggcccaagagatattcggaggg
gactttgactttgccgagtttgacactgaagcctatgaagatgcagaggaggaggaggag
gatgcagatgaagagtcatgggaccggcccaagaagcaggccaagaagagggtgggtcga
cgcagtatctttgagatctatgagcctagcgagctggagagcagtcacatgacggaccag
gacaacgagatccgctccactgacatgccagagaggttccagttacgctccactcgtgtg
aagccagcagaggatgatgagctggaacaggaggctgagtggatctataggaatgccttc
tctactctcaccatctccatgcaggagaacgcagactatttggacagaggtccaaccact
actttcagcagaaaaggccccagcaccatccagaagattaaagaggctttgaatttcatg
agaaaccaacactttgaggttccgtttatagcattctacaggaaagagtatgtggagcct
gaactcaatatcaatgatctgtggaaggtttggcagtgggatgagaagtggacccagctg
aaaacccgcaaacagaacctaagacgcctgttccagaagatgcagggataccagtttgaa
cagatctcagctgacccagataagccactggctgatggaattcgaccactagacacttca
gatttagagaggttgaaggatgtccagtctagtgatgaactgggcgacgtctacaaccat
ttcctgctgtactatggccgagatattccaaagatgcagaatgcagccaggtccagcaag
aaaaagatgaagaagatcaaagtggatgaagatggtaatgagcaggaagtagaggaggag
gaagaggaagaagaggagcagtcaaaggggccggacctgaagcttgcatctcgcagggat
atgtacagcatctgccagtgtgcaggactggatggcctggccaagaagtttggtctgact
ccagagcagtttggagaaaacctacgtgacagttaccagcgtcacgagacggagcagttt
cctgctgagcccatggagctggctaaggactacatctgcagccagttcagcacagcggag
gcagtacttgaggggactcgctacatggtcgccatgcagattgcccgggagcctctagtc
agacatgtgctccgacagacgttccaggaaagagccaagatcaacatcaaacccaccaag
aagggaaagaaggatgtggatgaggcccattatggttactcctttaagtatctgaaaaac
aagcctgtaaaggagctgaatggagaccagttcctcaagatgttccaggcagaggaagag
ggcctgctcaccataaacatctgtattgacctgattggagtgaaggggtacggaggtgac
caggcgtactatgaagagataaagcagttttactacagagatgagttcagccaccaggtt
caggagtggaacagacagcgcactctggccattgaacgatccctcaaacagttcctttac
ccgcagatggcgaaagagctgaagaacaaacttattgcagaagcaaaggagaacatcatt
aaggcctgcagcaggaagctgtataactggctgaaggtggcgccctatcggcctgaccaa
caagtggaggaggaggatgaggagctcatgtctgaggcccacggcaaagggatccgcgtg
ctgggagtggccttctcatccagcagagacaccccagtgttctgtgccctggtgaatggt
gacggagaggtgggggatttcctcaggcttccttacttcctgaagaggaggaacgcatgg
agggaggatgaaagggagaaaaagatccacgatattgaaaccctgaagaagtttctgaac
agcaagaagcctcacatcatcgctatagctggggagaacagggacgcccagatggtgatt
gaggacattaaacgcactgccagtgagctggagcaggagtcctccttccccaccatcggg
gtggaactggttgataatgaactggccatgctctacatgaacagcaagaagtcagaggca
gatttccgggactacccccctctcctgagacaggctgtgtctgtggccaggaagatccag
gaccccctggtggagtatgctcaggtgtgcagcagtgacgaagacatcctctgcctcaag
ttacaccctttgcaggagcatgtagtgaaggaggacctgctgaatgctctgtactgtgag
ttcatcaaccgggtgaatgaagtgggtgtggatgtgaaccgggccatggcccacccctac
acccagagcctggtgcagtacgtctgtggcctggggcccaggaagggatcccacctgctc
aggatcctgaagcaaaataacactcgtctggaaaaccgcactcagctggtcaccatgtgt
cacatgggccccaaggtcttcatcaactgtgctggtttcatcaagattgacacagcttca
cttggagacagtactgactcctatattgaggttctggacgggtcgcgggtgcacccagag
acctacgagtgggcaaggaagatggctgtggatgccctggagtacgatgagtcagcggag
gacgccaacccagccggagcactggaggagatcctggaaaacccggagcggctcaaagac
ctagacttggacgcctttgctgaggagctggaaagacagggctatggtaacaagggcatc
accctgtatgacatccgtgctgagctgagctgcaggtacaaagacctgaggtccacctac
agaggacctaacacagaggagatcttcaacctgctcaccaaggagacaccagagaccttt
tacatcgggaaactgatcaccagtgtggtgacaggcattgctcaccggcgcccccagggg
gagagttatgaccaggccataaggaatgatgagacaggtctgtggcagtgtcctttctgt
cagcaggataacttccctgagctcagcgaggtgtggaatcattttgacagtggctcctgc
cctggtcaagctattggggtccgctgtcgcatggacaacagagtcaccggctttatccct
accaagttcctcagtgacaaagtggtcaagcaccctgaagaaagggttaaggtgggcatg
acagtgcactgcaggatcatgaagattgacattgagaagctcagtgtggatctgacctgt
cggacgtcagacctgtcggataagaacaatgagtggaagcttcccaaggacacctactac
gactttgacactgagacagaggatgtgaagcaggaggaggaggccaagaagaaacagcag
agaacaacctacatcaagagggtgatagcccacccatcgttccataacataaacttcaag
caggcagagaagatgatggagtccatggaccagggagatgtaatcatcaggcccagcagt
aagggagagaaccacctgactgttacttggaaggttgctgatggcatctaccagcacatt
gacgtacgagaggagggcaaggagaatgccttcagcctgggacataccctgtggatcaac
actgaggaatttgaagatctggatgaaattacagccagatacgttcaaccaatggctgcg
tttgctcgcgatctacttggtcacaagtattttcaagaatgcaatggtggagaccgaaag
aaaatggaggaggtcttggtgaaaagcaagaaggaaaagcctacattcatcccctactat
gtgtctgcctgtagagagctgccagggaagtttctgctcggttaccagccccgcggaaaa
ccaagggttgagtttgtgactgtcacgcctgaggggttcagatacagaggccagattttt
cccacagtcaatggactcttccgctggttcaaagaccatttccaggagccagtggcaggg
attactcccagcagcagcagtagaacacgaaccccagcctctgtcaatgccacgccagcc
aatattaacattgcagatctgactcgtgcagtgaacgccctccctcagaacatgacctct
cagatgttcagtgccattgccgcagtaacgggccagggccagaaccccaacaccacacca
gccggatgggcatccagccagtacggctatactggtggcagcagcggtggagggggtagc
agcagcgcctatcatgtgtttgccacaccagctcagcagccgattgctactccccttctg
acgcccagctattcatacaccacccccacccccagccagcagcagactatcaccactccc
cagtaccccagcagcactccccagtcctcacacggacatggacaccgcccttcctcctcc
acaccatcatcaacatcctcctcccgccaccacaggacaccaacatcaaaggcaacttcc
cacacagcagtggactggggaaagatggccgagcagtggctccaggagaaagaggcagag
cgcaagaagacgaggcccagaatgaccccacgaccttctcccagccccatgatcgagagc
acgcccatgtccctcgctggagacgccacaccgctgctggatgagatggatcgctag
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integrated database retrieval system
