Oncorhynchus kisutch (coho salmon): 109905710
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Entry
109905710 CDS
T09179
Name
(RefSeq) serine/arginine-rich splicing factor 1B isoform X1
KO
K12890
serine/arginine-rich splicing factor 1
Organism
oki
Oncorhynchus kisutch (coho salmon)
Pathway
oki03040
Spliceosome
oki05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
109905710
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
109905710
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
oki03041
]
109905710
Spliceosome [BR:
oki03041
]
Common components
Common spliceosomal components
SR proteins
109905710
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
RRM_3
RRM_7
CoV_nucleocap
Nup35_RRM_2
Motif
Other DBs
NCBI-GeneID:
109905710
NCBI-ProteinID:
XP_020358827
Ensembl:
ENSOKIG00005043383
LinkDB
All DBs
Position
LG15:complement(65538540..65547347)
Genome browser
AA seq
262 aa
AA seq
DB search
MSGGVVRGPAGNNDCRIYVGNLPPDIRTKDVEDVFYKYGAIRDIDLKNRRGGPPFAFIEF
EDPRDADDAVYGRDGYDYDGYRLRVEFPRSGRGGGRGGFGGGGGGGGVGGAPRGRYGPPS
RRSEYRVIVSGLPQSGSWQDLKDHMREAGDVCYADVFRDGTGVVEFVRKEDMTYAVRKLD
NTKFRSHEFFLCVYQGETAYVRVKVDGPRSPSYGRSRSRSRSRSRSHSAASRSRSNSRGG
GTRGGRGSPRYSPRHSRSRSRS
NT seq
789 nt
NT seq
+upstream
nt +downstream
nt
atgtcgggaggcgtcgtgagaggccctgcaggaaataacgattgtcgtatttacgtcgga
aatctaccccctgatattcgcaccaaagatgtcgaggacgtgttttacaaatacggagcg
attcgcgacatcgacttgaaaaatcggagaggaggacctccctttgcctttatcgaattt
gaagatcccagggatgccgacgatgcagtgtacggacgagacggctatgactacgacggt
tatcggctgcgagttgaattccctcggagcggcaggggtggggggagaggcggctttggt
ggtggtggtggtggggggggggttggtggcgcccctagaggcagatacgggccgccatcc
agacgctccgagtacagggtcattgtctcagggcttcctcagagtggcagctggcaggac
ctcaaggatcacatgcgtgaggctggggatgtatgttatgctgatgttttcagagatgga
actggggttgtggagtttgtgcgcaaagaagacatgacctacgccgttcgaaaactggat
aacaccaaattccgatcacacgagttctttttgtgtgtctaccagggagagaccgcttac
gttcgcgtgaaagtagatggtccccgcagcccgagctatggaagatcacgttccaggagc
cgcagtcgaagcaggagccacagcgcagccagtcgcagccgcagcaactctcgcggtggt
ggtacccgtggtggcagaggatctcctcgctactctccacgccatagccgctctcgctcc
cgttcctaa
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integrated database retrieval system
