Oncorhynchus kisutch (coho salmon): 109905928
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Entry
109905928 CDS
T09179
Name
(RefSeq) SH3 domain and tetratricopeptide repeat-containing protein 2-like
KO
K24313
SH3 domain and tetratricopeptide repeat-containing protein
Organism
oki
Oncorhynchus kisutch (coho salmon)
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oki04131
]
109905928
Membrane trafficking [BR:
oki04131
]
Protein recycling
Rab GTPases and associated proteins
Rab11 associated proteins
109905928
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_12
TPR_1
TPR_8
TPR_2
SH3_9
SH3_2
SH3_1
TPR_10
TPR_MalT
TPR_5
SCAN
ANAPC3
Motif
Other DBs
NCBI-GeneID:
109905928
NCBI-ProteinID:
XP_031647210
Ensembl:
ENSOKIG00005026136
LinkDB
All DBs
Position
LG15:complement(14305269..14346516)
Genome browser
AA seq
1508 aa
AA seq
DB search
MAWCCCTPLRASSSSCCTPLLKRCPLFPDISPAELDALWREPPYTLAGTNGHFTGNDVRN
RGEEEGPGVESGEGEAELDSYWTRKEAFTRGSTVSLAVGERFSSDVVLVFSGRRCSGVIP
DSELQEALRTRLRVVESNSQDVIQLFKDLSARLLSVHAEKDSFVITFKTVEEIWKFSTYL
ALGYVARCLENFLCDQSFWLDTELLRDLEITVTVDEEHLATLYLGLLLQEGSFFAKALVS
SGEHSDEEEELCFRRNDLLMVRDTGQDSHWEGTLLSTGQHGLVPVNTMQPLPYPFYQWFL
RKYSDCAGCSPSERGQFDHPIVTGSCEAVVDHNPVGSDELQLSQGDLIEIQGMLLRGLDL
FIGTHCSTGNTGFVHKAHVKPLNAKPPDRQLVFLSEEERASMAQINPCSSEPRDSGLLER
LFSSDISTVYRLDRLDQSDFTYIRNQPKQEHKLPVSARQSIISEKSDATPPYHSSPRPSL
SHSSPRASFYASQNALGRGGDGELLSFSLDDTFREMNEFQEDPPLFLEEGSWEGVDPELC
DPTLTLLNMHHFQEDFLPLYDLNHSFLWLTFSGQSEDELLGHLEIVREGAKRTGMAWAHR
RACFLLGRLCAKKLKYSQARVYYEEALGVSVDGFSDLPLLIALYTNLTAIYLKQKMADKL
PPTLEKASALLLCLPRHTFTSLDEFELLMLVLRRSVVEGDKHLEARVCYLTASLFLLLRK
IDDALPFVERLQFLTVTLSAEEGRPIAPLDLNWLLSRLYHRKYMPYLALASLSLDSGQDH
SLQDAFHRIELFSRNSVRLNPRWKEGTSLLPAQIVVYLQQALAIAERGEDLKTQRDLCLG
LACVYQQHGALVKALPCAQQAVQTGGGINEEEGFEASVLLGWLLVLTGEPERAQHTLQPL
LQSLQGTDSPTQRGVVHNLLALCLRQQGRIAEAGSHLHHALTISRESGNQRNQALALANL
GCLALGVGAPTLAERFLFRSLWLFLEIWESPVDEEHVQTYLWLGRSYKDRGRSQDVRLCF
EMGLLISLQARNLHSQMVVAKVLSRHYADVLLYGQSILYYEHCVSVSRDLKDKRLEGEYL
EILSSLYLSLNTEKSSRKSLDYSKQSLRISIDLGKREEESETWLQVGRIYYLIREDELAD
MYLQAAVKTALRMNDPRFAMSIYEEAGDIFFKGHRNRLASLPFYRDGSLPFARSIHDVHS
EFRLLSKLTELLMTQEEYEEALQYAILAVQISTKTGVCVNERAAYHRLATVYYSLEQYEM
TENYYLKSLSLSPAVLQHPLEARYYTKLYCRLGDLTLHKLKDAYDSVGYFQLALAAALED
RANPQALYVVYMKLAEIHANHMPDPLLCQAYRERAQSLRRELSGLEEMDGREGETEEWRG
EMEGKGETETEGREETEGSTLGRVANGEVGESSGPVPVRKEYYERNIEQAANYDGLKREI
LCRYGYSQARWTQLVPPSPDDLLHIIRVWLLTDGYTLSIVDKVVMDRFLSALPHNMKRAV
SLCKPQTL
NT seq
4527 nt
NT seq
+upstream
nt +downstream
nt
atggcgtggtgctgttgcactcctctccgggcctcctcgtcctcctgctgcactccgctt
ctcaaacgctgccctctcttcccagacatctcccctgctgagctggatgcactatggagg
gaaccaccgtacacgctagcgggaaccaatgggcacttcacaggaaatgatgttaggaat
cgaggggaggaggagggtccgggggtggagtctggggaaggggaggcggagctggacagt
tactggacgaggaaggaggcgttcaccagaggaagcaccgtgtcactggctgtgggagag
aggttctcctcagacgtggttctagtgttcagcggtcggcggtgctcaggtgtaatacct
gactctgaactacaggaggcgctccgtacaagactcagggtcgtcgagagcaacagtcag
gacgtcattcagctcttcaaggacctgtctgcccgtctgctgtctgtccatgctgagaag
gacagctttgtcatcaccttcaagactgtagaggagatctggaagttctctacctacctg
gctctgggctatgtggcgcggtgcctggagaatttcctgtgtgaccagtcgttctggctg
gacactgagctgctgagggacttggagatcactgtgactgtagacgaggaacacctggca
acactctacctgggactgctgctgcaggagggttcgttcttcgccaaggcgctggtgagc
agtggcgagcatagcgatgaggaagaggagttgtgtttcagacgtaacgatttgctgatg
gttagagacacggggcaggacagtcactgggagggcacccttctctccaccggacaacac
ggactagtgcctgtcaacaccatgcagccgctgccatatcccttctaccagtggtttctg
aggaagtactctgactgtgccggatgctccccttcagagagaggacaatttgaccaccct
atagtaaccggatcctgtgaggctgtagtggaccacaacccagtaggttctgatgagctc
cagctgagtcaaggtgacctgattgagatacaggggatgctacttcgaggtctggacctg
ttcataggaacacactgctctacaggaaacaccggcttcgtgcacaaggctcacgtcaaa
ccactcaacgccaaacccccagacagacaactggtgtttctaagtgaggaggaacgtgcg
tcaatggcccagattaacccctgcagtagtgaacccagagacagcggcctcctagagaga
ctcttctcctctgacatcagtactgtctacagactagatagactggatcagtctgacttt
acctacatcagaaaccaaccaaaacaagagcataagctccccgtcagcgcccggcagtcc
atcatctcagagaagagtgacgcaacacccccctaccactcctccccccgcccctctctc
tctcactcctcgccccgcgcctccttctacgcctcccagaatgctttggggcgtggcggt
gacggggagttgctgtccttcagtctggacgacaccttcagagagatgaatgagttccag
gaagacccaccccttttcctggaggaggggagttgggagggggtggatccagagctctgt
gacccaaccctgactctgctcaacatgcatcacttccaggaggacttcctgcccctctat
gacctaaaccactccttcctgtggctgacgttctcaggacagagtgaggatgagttactg
ggccatctggagattgtcagggagggggccaagagaacgggcatggcctgggcacaccga
cgggcatgcttcctactggggaggctctgcgccaagaagctcaagtactcccaggcccgt
gtgtattacgaggaagcccttggcgtctctgttgacggtttctctgacctccctctcctc
atcgccctgtacaccaacctcacagccatctacctcaaacagaagatggccgacaagctg
cccccgaccctggagaaggccagtgctctgctcctctgtctccccagacacaccttcacc
tccctggatgagtttgagctgctgatgctggtgctgcggaggtctgtggtggaaggggac
aaacacctggaggcacgggtctgttacctcaccgccagcctcttcctcctccttagaaag
atagatgacgccctgcccttcgtggagcgcctccagttcctcaccgttaccctgtctgct
gaggaggggcgccccatcgcccccctggacctcaactggctcctgtcccggctctaccac
cgtaaatacatgccctacctggccctggcatcactcagccttgactctggacaggatcac
tcactacaagacgccttccacaggatagaactgttcagcaggaactcggtgcgtctgaat
ccgcgatggaaagaggggacgtctctcctccccgcccagatcgtggtgtatcttcagcag
gctctggccattgcggagcggggtgaggaccttaagacccagagggacctgtgtctgggc
ttggcctgtgtgtaccagcaacacggcgccctggtgaaggccctgccctgtgcccagcag
gctgtacagaccgggggaggtatcaacgaggaggaggggttcgaggcttcagtactgctg
ggatggttgttagtcctgacgggagagcctgagagggcacagcacaccctgcagccacta
ctgcagtctctacagggaaccgacagcccgacccagaggggagtggtccacaacctgctg
gctctgtgtctgcggcaacagggtcgcatcgcagaggccggaagccacctccaccacgcc
ctcaccatctccagggagagtggcaaccagaggaaccaggccctggccctcgccaaccta
ggctgcctggcactgggcgtgggggcacccacactggcagaacgattcctattcaggtct
ctgtggttgttcctggagatctgggagagtcccgttgacgaggagcacgtccagacctac
ctatggctggggcggagctacaaggacagggggaggagccaggacgtcaggctgtgtttt
gagatgggcctcctcatatccctccaggccaggaacctccatagtcagatggtggtggct
aaagtcctgagtcgtcactatgccgacgtgctgctgtatggacagagtatcctctactat
gagcactgtgtgtctgtgtccagggacctgaaggacaagagactagagggagaatatcta
gagatcctcagtagcctctacctgtccctcaatactgagaaatcatcgaggaagtctctg
gactacagtaagcagagtctgcgtatctccattgacttggggaagagagaggaagagtca
gagacgtggcttcaggtgggacgcatctactacctcatccgtgaagacgaactggcggac
atgtacctacaggcagcggtgaagacagccctgaggatgaatgaccctcgcttcgccatg
agtatctacgaggaggcaggagatatcttcttcaaaggccacaggaacagactggcgtca
ctgcccttctacagggacggcagtctcccgtttgctcggagcatccatgacgtccactca
gagttcagactgctgagtaaactgactgaactactgatgacccaggaagagtatgaagag
gctctacagtacgccattctggctgtacagatcagtaccaaaacaggtgtgtgtgtgaat
gagcgcgcagcgtaccaccgtctggctacagtgtactacagtctggagcagtatgagatg
acagagaactactacctcaagtctctgtctctcagccctgctgtactgcagcaccccctg
gaggctagatactacaccaagctctactgcaggctgggggatctgaccctgcacaaacta
aaggatgcctatgactcggtgggctacttccagctggctctagctgctgccctggaggac
cgtgccaacccgcaggcgctgtatgtggtctacatgaagctggcagagatccatgccaac
catatgccagacccactcctctgccaggcttacagggaaagagcacagagcctgaggagg
gaactctctgggctggaagagatggatgggagggaaggagagacagaggagtggagagga
gagatggagggcaaaggagagacagagacagagggaagagaagagacagagggaagcact
ctgggaagggtggccaacggagaagtgggcgagtcttcgggccccgttcctgtccggaag
gagtattatgaacgtaacatcgaacaggcggctaactacgacggactcaaacgggagata
ctctgccgctatgggtacagccaggcccggtggacccaactggtccccccgagcccagat
gacctactgcacatcatcagggtatggctcctaaccgacggatataccctctccatcgta
gacaaagtggtcatggatcgcttcttaagtgcgctaccccacaacatgaagagggctgtg
agtctatgcaagccccagaccttgtag
DBGET
integrated database retrieval system
