Oncorhynchus kisutch (coho salmon): 109905972
Help
Entry
109905972 CDS
T09179
Name
(RefSeq) FACT complex subunit SSRP1-like isoform X1
KO
K09272
FACT complex subunit SSRP1/POB3
Organism
oki
Oncorhynchus kisutch (coho salmon)
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
oki03000
]
109905972
03036 Chromosome and associated proteins [BR:
oki03036
]
109905972
Transcription factors [BR:
oki03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG2-related
109905972
Chromosome and associated proteins [BR:
oki03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
FACT complex
109905972
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PH1_SSRP1-like
Rttp106-like_middle
SSrecog
POB3_N
HMG_box
SSRP1_C
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
109905972
NCBI-ProteinID:
XP_031646007
Ensembl:
ENSOKIG00005011094
LinkDB
All DBs
Position
LG15:complement(33433786..33446739)
Genome browser
AA seq
710 aa
AA seq
DB search
MGDTLEFNEIYQESKGSWNDGRLRFSKQNVVYKSSKTGKVDNIPAAELSQATWRRVCLGH
GIKLATSTGHVYKYDGFRDTDYERISEFFKANYKVELTEKDMCVKGWNWGTAKFSGPLLS
FDVNDSSVFEIPLASVSQCATGKNEVTLEFHQNDDAEVSLMEVRFYVPPGPADEGADPVE
AFAANVLSKADVIQATGDAVCVFKELQCLTPRGRYDILIYPAFLHLHGKTFDYKIPYTTV
LRLFLLPHKDQRQMFFVISLDPPIKQGQTRYHFLILLFSKEEELRLTLNMSEEEVEKRYE
GKLSKNMSGSLYEMVSRVMKALVNRKITVPGNFQGNTPGAQCITCSYKAQSGLLYPLERG
FIYVHKPPVHLRFEEISCVNFARGTTTTRSFDFEVETKQGNQFTFSSIEREEYGKLFDFV
NAKKLNIKNRGFKEKKGMKSKNNEYSDSDEDQHDAYLERMKAEGKIREEGDGSNDSDEET
DESFNPGEESDVAEEYDSNASESESGSGGDGSDDEGKKKKPAKKAKVVKERKPRKEKKQK
DTNAPKRPMSSYMLWLNSSREHIKSENPGISITEISKKAGEMWKQIGKDDKEGWDRKAEE
AKKNYEKAMKEYRENGGGSSTPSKKESKKAGGKKEDKAGGKKRKSDGGEKEKEQGGNDSF
KSREFISSEESSSEGERKKAKKAKGKPKGKESEEEEEVVTTPPSSEEDSD
NT seq
2133 nt
NT seq
+upstream
nt +downstream
nt
atgggagacacgcttgagttcaacgagatctaccaggaatccaaggggtcctggaacgac
ggtcgtctgaggttcagtaagcagaatgtggtgtataagagcagtaagacggggaaggtg
gacaacatcccggcagcagagctgtcccaggccacgtggaggcgtgtgtgtctgggacac
ggcatcaagctggccaccagcaccggacatgtctacaaatatgacggcttcagagacacg
gattatgagaggatctcggagttcttcaaggccaactacaaggtggagctgacagagaag
gacatgtgtgtgaagggctggaactggggcactgctaaattctctggtccattgttgtcg
tttgacgtgaatgacagctccgtgtttgagatccccctggccagcgtgtcccagtgtgcc
accgggaagaacgaggtgacgctggagttccaccagaacgatgacgctgaggtctctctc
atggaggtccgtttctacgtcccccccggcccggcagacgagggggcagacccggtggag
gcgtttgccgcgaatgtgctgtctaaggccgacgtgatccaggctacaggagatgctgtg
tgtgtcttcaaagagctgcagtgcctcacacccaggggcaggtatgatatcctcatctac
cccgccttcctccacctccatggtaagacgtttgactacaagatcccctacaccaccgtg
ctgcgtctcttcctgcttccacacaaggatcagagacagatgttctttgtgatcagtctg
gacccgcccatcaagcaggggcagacccgttaccacttcctcatcctgctcttctctaag
gaggaggagctccgcctcaccctcaacatgagcgaggaggaggtggagaagcgttatgaa
gggaagctcagtaagaacatgtcaggttctctctatgagatggtgagcagagtgatgaag
gctctggtcaacaggaagatcaccgtgcccggaaacttccaggggaacaccccaggggcc
cagtgtataacgtgttcctacaaggcacagtccggtttgctctacccgctggagcggggc
ttcatctacgtgcacaagccccccgtccacctgcgcttcgaggagatctcctgtgtcaac
ttcgccagaggcaccaccaccacgcgctccttcgacttcgaggtggagaccaagcagggg
aaccagttcaccttcagcagcatcgagagggaggagtacgggaagctgtttgactttgta
aacgccaagaaactcaacatcaagaatagaggattcaaggagaagaagggcatgaagagt
aagaacaacgagtacagtgactccgatgaagaccagcacgatgcctacctggagaggatg
aaggctgagggcaagatcagagaagagggagacggcagcaacgactccgacgaagagacc
gatgagtctttcaaccctggggaggagagtgatgttgctgaggagtatgacagtaacgcg
tcagagagtgaaagcggcagcggaggtgatggcagcgatgacgagggaaagaagaagaag
cctgcaaagaaggccaaagtagtgaaggagaggaagccacgcaaagagaagaagcagaag
gacaccaacgcccccaagaggccgatgagttcctacatgctgtggctcaactccagccgt
gagcacatcaagtcggaaaaccccggaatctcaatcacggagatctccaagaaggccgga
gagatgtggaaacagatagggaaggacgacaaagaggggtgggacaggaaagcagaggag
gctaagaagaactatgagaaagccatgaaggaatacagagagaacggtggaggctcctct
acaccctccaagaaggagagcaagaaggcaggaggcaagaaggaggacaaggcaggaggc
aagaagaggaagtccgacgggggagagaaagaaaaggagcaaggagggaacgacagtttt
aagagccgagagtttatctccagcgaggagagttcgtctgagggcgaacggaagaaggcc
aagaaagccaaaggcaaacccaagggcaaggagtctgaggaagaggaggaagtggtgacc
acgccccccagctctgaggaggactctgactaa
DBGET
integrated database retrieval system
