Oncorhynchus kisutch (coho salmon): 109905979
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Entry
109905979 CDS
T09179
Name
(RefSeq) gamma-aminobutyric acid receptor subunit alpha-6-like
KO
K05175
gamma-aminobutyric acid receptor subunit alpha
Organism
oki
Oncorhynchus kisutch (coho salmon)
Pathway
oki04080
Neuroactive ligand-receptor interaction
oki04082
Neuroactive ligand signaling
oki04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
109905979
04082 Neuroactive ligand signaling
109905979
04519 Cadherin signaling
109905979
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
oki04040
]
109905979
Ion channels [BR:
oki04040
]
Ligand-gated channels
GABA-A
109905979
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Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
SAP130_C
TAF4
Motif
Other DBs
NCBI-GeneID:
109905979
NCBI-ProteinID:
XP_020359203
Ensembl:
ENSOKIG00005004238
UniProt:
A0A8C7CUG8
LinkDB
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Position
LG15:36075703..36107466
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AA seq
559 aa
AA seq
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MVSAKKEMVTAMYPSYISTLFYFFCLIACVKRISGTIKKDDRIYPENFTRILDRLLDGYD
NRLRPGFGGPVTEVKTDIYVTSFGPVSDVEMEYTMDVFFRQTWVDRRLRYEGPIEILRLN
NMMVANVWTPDTFFRNGKKSVAHNMTAPNRLFRIMKNGTILYTMRLTISAECPMKLVDFP
MDGHACPLKFGSYAYPKTEMIYTWTKGPQYSVEVPPESSSLVQYDLIGHTVSSEEVKSIT
GEYVVMTVHFHLKRKMGYFMIQTYIPCIMTVILSQVSFWINKESVPARTVFGITTVLTMT
TLSISARHSLPKVSYATAMDWFIAVCFAFVFSALIEFAAVNYFTNAEMERLKRKPPKCPP
APQTTPVKVKDMEEVLQHNPDTNGNLRKRMNYMSQQDGQKAESNSTAAARGVTRKQPQSG
QSSSSKGATGGAIILPHSSPGPASQPNTSSLTLSAMNTPLAPPTTEKAMTILANQSQPTA
DSSLRDLLGPRLEHIQLMGKNEPKQLPCSQPTTASMGGTSKIDKYARILFPVSFGAFNMV
YWVVYLSKDTMEAKFRGQI
NT seq
1680 nt
NT seq
+upstream
nt +downstream
nt
atggtttctgccaagaaggagatggtaactgcgatgtaccccagttacatttcgactctc
ttctactttttctgcttgattgcttgtgtaaagagaatctctggaacgataaaaaaggat
gacagaatatatcccgagaatttcacacgcattttagacagactcctggacgggtatgac
aacagactgcgacctggatttgggggtccggtgacagaggtgaaaacagacatttatgtg
acaagtttcgggcctgtctctgatgttgaaatggagtacaccatggacgtgttcttcaga
cagacatgggtcgacaggaggctgaggtacgagggtcctattgagatcctccgactcaac
aacatgatggtcgccaatgtgtggactcctgacaccttcttcaggaatggcaagaagtct
gtggcacacaacatgactgcccccaacaggttgttccgcatcatgaagaacggcacgatt
ctttacaccatgaggttgactatcagtgcagagtgtcccatgaagcttgtggacttcccc
atggatggacatgcatgccctctcaagtttggaagctatgcataccctaaaacagagatg
atttatacctggaccaaaggaccacagtattcagtggaggttcccccagaatcatccagc
ctagtgcagtatgatctcattggccacactgtcagcagtgaggaggtcaagtcaatcaca
ggtgaatacgtggtgatgacagtgcacttccacttgaagcggaaaatgggctacttcatg
attcagacgtatatcccctgcatcatgacagtaatcctctcccaagtgtccttctggata
aataaagaatcggtcccagctcgaacagtcttcggcatcaccacggtcctgaccatgacc
acgttaagcatcagcgcgcgccactccctccccaaagtctcctacgccaccgccatggac
tggttcattgccgtgtgcttcgcctttgtcttctccgctctcatagagttcgctgccgtc
aactacttcaccaatgcagagatggagagactgaaaaggaagccgccaaaatgcccgccg
gcgccccaaacaaccccagtgaaagtgaaggatatggaggaagttctgcagcataaccct
gacaccaatggtaacctgcggaaacggatgaactatatgtcccagcaagatggccagaaa
gccgagtcaaacagcacagcagcggcaagaggggtaaccaggaaacaaccccagtctggc
caatcatcttcatccaaaggggcaactggcggcgccatcatcctaccacactccagccct
ggccccgccagccagcccaacacttcctccttgaccctgtctgccatgaacacgcccctg
gctccacccacaactgaaaaagcaatgacaatactagccaatcagagccagcccactgct
gactcctcgctccgggaccttctaggacccagactggagcacattcagctgatgggcaaa
aatgaacccaagcagttgccatgctcccagccgaccaccgccagtatgggtgggaccagt
aaaatcgacaagtatgcccgcatcctgttcccggtgtcctttggcgcattcaacatggtg
tactgggtggtttacttgtcaaaagataccatggaggccaaatttagaggccaaatctag
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