Oncorhynchus kisutch (coho salmon): 109906023
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Entry
109906023 CDS
T09179
Name
(RefSeq) gamma-aminobutyric acid receptor subunit alpha-2
KO
K05175
gamma-aminobutyric acid receptor subunit alpha
Organism
oki
Oncorhynchus kisutch (coho salmon)
Pathway
oki04080
Neuroactive ligand-receptor interaction
oki04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
109906023
04082 Neuroactive ligand signaling
109906023
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
oki04040
]
109906023
Ion channels [BR:
oki04040
]
Ligand-gated channels
GABA-A
109906023
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
DUF7205
Motif
Other DBs
NCBI-GeneID:
109906023
NCBI-ProteinID:
XP_020359254
Ensembl:
ENSOKIG00005004415
LinkDB
All DBs
Position
LG15:36131597..36188686
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AA seq
455 aa
AA seq
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MRNRDYIFQCLFICLSLTVVWQTRPVIADPTTDAFKNNITLFTRILDRLLDGYDNRLRPG
LGDRVTEVNTNVYVTSFGPVSDTDMEYTIDVFFRQSWKDERLKFDGPMDILRLNNLMASK
IWTPDTFFHNGKKSVAHNMTMPNKLLRIQDDGTLLYTMRLTVHAECPMHLEDFPMDFHSC
PLKFGSYAYTMSEVTYVWTSKPADSVVVEGESSRLNQYDLLGQTVGQETIKSSTGEYTVM
TAHFHLKRKIGYFVIQTYLPCIMTVILSQVSFWLNRESVPARTVFGVTTVLTMTTLSISA
RNSLPKVAYATAMDWFIAVCYAFVFSALIEFATVNYFTKRGWAWDGKSIVNDKKKEKASA
MKKNNAYAVAVANYAPNITKDSGLSTIAKGGAPDPNMAVGKVGGKADPKKTFNSVSKIDR
ISRIMFPVLFSSFNLVYWATYLNREPYIKDMVRST
NT seq
1368 nt
NT seq
+upstream
nt +downstream
nt
atgaggaatagagactacatttttcaatgtctgttcatctgcctctcgttgacggtcgtc
tggcaaacgaggccagtcattgctgatcctacaacagatgccttcaagaacaacatcact
ctcttcacacggatcctcgacagacttctagatggctatgataatcgccttcgacccggc
cttggggatcgtgtaacagaggtgaataccaatgtctacgtcaccagctttggcccagtt
tcagatacagacatggaatacacgatagacgtgttcttccggcaaagctggaaagacgag
aggttgaaattcgacgggcccatggacatactgcggctgaacaacttgatggccagtaaa
atatggactccggacacgttcttccataacgggaagaagtcggtggctcacaacatgacc
atgcccaataaactactgaggattcaagacgatggcaccctactttacaccatgaggttg
acggttcatgcagagtgtcctatgcatctggaagatttccccatggacttccactcatgt
cccctgaagtttggcagctatgcctatacgatgtcagaggtgacttacgtctggaccagt
aagcccgccgactctgtggtggtggaaggcgagagctcccgtttgaaccagtacgacctg
ctcggccaaacagtgggccaagaaaccatcaagtccagcacaggcgaatacactgtcatg
acggcacatttccatttgaagcggaagattggttactttgtgatacagacctatctacca
tgcatcatgactgtcatcctctcccaagtgtccttctggctgaacagagagtccgtgcca
gctaggactgtgtttggtgtaaccactgtgctgacaatgaccaccctgagtataagtgct
cgtaactccctccccaaggtggcatacgccacggccatggactggttcatcgctgtctgc
tacgcctttgtcttctccgccctcattgagtttgccaccgtcaactacttcacaaagcgc
ggctgggcctgggatgggaagagcattgtgaatgacaagaaaaaagagaaggcctccgcc
atgaagaagaacaatgcgtacgccgtggcggtggccaactatgcacccaacatcaccaaa
gactctgggttgtccaccatcgccaagggcggcgctcctgaccccaacatggcggttggc
aaggtgggtggcaaggcagacccaaagaagactttcaacagtgtgagcaaaatcgatagg
atttcgaggattatgttcccggtcctgtttagcagcttcaacttagtctattgggccaca
tacttaaacagagaaccttatataaaggatatggtgcgctcaacctag
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