KEGG   Oncorhynchus kisutch (coho salmon): 109906268
Entry
109906268         CDS       T09179                                 
Name
(RefSeq) neurexin-2 isoform X1
  KO
K07377  neurexin
Organism
oki  Oncorhynchus kisutch (coho salmon)
Pathway
oki04514  Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:oki00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04514 Cell adhesion molecules
    109906268
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:oki04131]
    109906268
Membrane trafficking [BR:oki04131]
 Exocytosis
  Calcium ion-dependent exocytosis
   Others
    109906268
SSDB
Motif
Pfam: Laminin_G_2 Laminin_G_1 Laminin_G_3 EGF Syndecan
Other DBs
NCBI-GeneID: 109906268
NCBI-ProteinID: XP_031648022
Ensembl: ENSOKIG00005029395
LinkDB
Position
LG16:complement(27424446..28441368)
AA seq 1681 aa
MTRGLRFPAWPLAFLSLLVTTRALEFGGAPGQWARYGRWEAGSVGELSFSLKTNISKALV
LYLDDGGNCDFMELLIAGGRLQLRFAIHCAEPATLHMETRVNDDRWHMVLLTRNFRETLL
MVDGETKVAEVKSKRKEMAVVSDLFVGGIPPDVRLSALTSSTVKYEPPFLGLISNLKVGE
MPPTLLNSQGIQSDLEYLCTKQNPCFNGGFCSIQYGEVHCDCTHTRYKGKYCKEAEEYAV
EGLAHLTLSNQGDSSQGGKEESVATFKGNEFFCYDLSLTPIQSSTDEITLSFRTLQRNGL
MLHTGKSADYVNLSLKSGAVWLVINLGSGAFEALVEPVNGKFNDNTWHDVRVTRNLRQHA
GIGHAMVTISVDGILTTTGYTQEDYTMLGSDDFFYIGGSPNTADLPGSPVSNNFMGCLKD
VVYKNNDFKLELSRLAIERDPKISLNGDLVFRCEDVAALDPVTFESPESFIALPKWNTKK
TGSISFDFRTTEPSGLLLFSHGRPQGPKEQKPGRDMKSDYFAMELLDGFLYLLMDMGSGS
IKLKTSNKKVNDGEWCHVDFQREGRKGSISVNSRSIPFNSNEGSEILDLDSDMFLGGLPE
TRSDLVLPPEVWTALLNYGYVGCVRDLFIDGKSRDVRRLAEIQSSPGVSSFCTRELQKRC
SSTPCGNGGLCKEGWNRYICDCTGTGYLGSNCELEATVLSYDGSMYLKIIIPGTMHTEAE
DVALRFMSQRAFGLLVATTSKESADTLRLELDGGRVKLTVNLDCIRIDCNLSKGPETLFA
GQKLNDNEWHMVKVVRRGKNFQLSVDNVTVEGQMTGAHTRLEFHNIETGIMTERRFISVV
PSNFIGHLQGLTVNGVPYLDQCKNGDISYCELNARFGMRHIIADPVTFRTKASYLALATL
QAYASMHLFFQFKTTTSDGLLLFNSGDGSDFIVVELVKGYVHYVFDLGNGPSLMKGNSDK
PLNDNQWHNVVVSRDANNVHTLKIDSRTVTQHSNGARNLDLKGELYIGGVGKSMYNSLPK
LIASRDGYQGCLASVDLNGRLPDLIADALHRVGQVERGCDGPSTTCTEDSCYNQGVCLQQ
WEGFSCDCTMTSYGGSFCSDPGTTYIFGRGGALITYTWPPNDRPSTRADRLAVGFSTQLK
EAVLVRVESAEGLGDYLELHIERGRIGVIFNVGTDDIAIEESAVAVSDGKYHVVRFTRSG
GNATLQVDSQPVIERFPTGNFDNERLAIARQRIPYRLGRVVDEWLLDKGRQLTIFNSQAF
IKIGGGGGDKARHFQGQISGLYYNGLQVLKLAAEGDPNVQAKGNLRLVGDVPSVLTTDTT
STTPLADMSTTIMETTTTMATTTTRKQRSPTMRDSVTQNTDDLLVASAECPSDDEDLEEC
EPGNGGELVLPIITVDSLDPPSIVTRYPVIPPPPTYRPLLPFLETTKESLPLPNGRPPCP
LDQEDCEEAGPIEVSAYGSGEMTESDDEDYYKNSPLVTDRTVLPPPPNESGIHNPHDRHF
SHRPPNSHRPPLSSTPTANPNQLGPRLNKPGGSSSKNPAGKMNTRDQVLLPPSNPSSDPD
RHRHVPGVTYPPNFPHVPTPDPTSPERGGPPGAVEVIRESSSTTGMVVGIVAAAALCILI
LLYAMYKYRNRDEGSYQVDQSRNYISNSATQSNGTLVKEKQPGTAKTTTKNKKNKDKEYY
V
NT seq 5046 nt   +upstreamnt  +downstreamnt
atgacgagggggttgaggtttcctgcgtggcccctggcgttcctcagtctgctggtgacg
acccgggcgctggagttcggcggggcccccggccagtgggcccgctacgggcgttgggag
gcaggctcagtgggcgagctgagcttcagtctgaagaccaatataagcaaggccctggtg
ctctacctggacgacggcggcaactgcgacttcatggagctgctgatcgccggcgggcgc
ctccagctgcgcttcgccatccactgcgctgaacccgccaccttacacatggaaacccgg
gtcaacgacgaccgctggcacatggtgctcctcacacgcaacttccgcgagaccctgctc
atggtggacggcgagaccaaggtggcggaggtcaagtccaagcggaaggagatggcggtg
gtcagtgacctgtttgtgggtggcatcccgcccgacgtgcgcctctcagcccttacatcc
agcacggtgaagtacgagcccccattcctgggcctgatctccaacctgaaggtgggtgag
atgccccctaccctgctcaacagccagggcatccagagtgacctggagtatctgtgcacc
aagcagaacccctgcttcaacggaggcttctgctccatccagtatggcgaggtgcactgt
gactgcacacacacccgctacaagggaaagtactgcaaggaagcagaagagtatgctgtc
gaaggtctggcgcacctgacgttaagcaaccaaggtgactcatcgcagggcgggaaggaa
gagtcggtggccaccttcaaggggaacgagttcttctgctacgacctgtcgctgacgccc
atccagagcagcacggacgagatcacgctctccttccgcacgctgcagcgcaacggcctc
atgctgcacacgggcaagtcggccgactacgtcaacctgtcgctgaagagcggcgccgtg
tggctggtcatcaacttgggctcgggcgctttcgaggcactggtggagcccgtcaacggg
aagttcaacgacaacacctggcacgatgtgcgcgtcacccgcaacctgcgtcagcacgca
ggcattggacacgctatggtgactatatcagtggatggtattctgaccactactggttat
acccaggaggactataccatgttgggctcagatgacttcttctacattggggggagtccc
aatactgcggacctgcccggatcacccgtcagcaacaacttcatgggctgccttaaagat
gtggtgtataagaataacgacttcaagctagaactctcccggctggccatcgagcgggac
cctaagatcagcctgaacggagacctcgtcttccgctgtgaggatgtggccgccctggac
cccgtcacctttgagtcccccgagtccttcatcgccctgcccaagtggaacaccaagaaa
acaggctccatctccttcgacttccgcaccacagaacccagcggcctgctgcttttcagc
cacgggcgcccccagggtcctaaagagcagaaaccgggtcgagacatgaagtcagactat
tttgctatggagctgctggacgggttcctatacctactcatggacatggggtcagggagt
atcaagctgaagaccagtaataagaaggtgaacgacggggagtggtgccatgtggacttc
cagagggaagggaggaaaggctccatctcggtgaacagccgcagcatccccttcaactcc
aacgagggcagtgagatcctggacctggacagcgacatgttcctggggggtcttcccgag
acccgctctgacctggtgctgccccccgaggtctggacggccttgctcaactacggctac
gtgggctgcgtccgcgacctcttcatcgacggcaagagccgcgacgtgcgccgcctggcc
gagatccagagctccccgggcgtcagcagcttctgcacccgtgagcttcagaagaggtgc
agcagcaccccctgtgggaacggaggcctatgtaaagagggatggaaccgctacatctgc
gactgcaccggcaccggctacctgggcagcaactgtgaactcgaggcaacggtgctgagc
tacgacggcagcatgtacctgaagatcatcatcccggggaccatgcacaccgaggcagag
gacgtggcgctgcggttcatgtcccaacgggcattcggtctcctcgtggccaccacctcc
aaagagtccgctgacaccctgaggctagagttggacggtggcagggtcaagctgactgtc
aacctagattgtatcaggatagactgtaacctcagtaaaggacctgaaacgctcttcgct
ggccagaagctcaacgacaacgagtggcacatggtgaaagtggtgcgccgaggaaagaac
ttccagctatctgtggacaacgtcacggtggaaggccagatgacgggtgcccacacgcgg
ctggagttccacaacattgagactggcatcatgaccgagcgtcgcttcatctccgtggtg
ccctccaacttcatcggtcacctccagggcctgacagtcaacggcgtgccctacctggat
cagtgcaagaacggtgacatctcctactgtgaactcaacgcccgctttgggatgcgccac
atcatcgccgatccggtgacgtttcgaacgaaggcaagctatctagcgttggctactttg
caggcctacgcctccatgcacctcttctttcagttcaagaccaccacgtcggacggcctg
ctgctcttcaactcgggggatggcagcgacttcatcgttgtggagctggtcaaaggctac
gtccattatgtctttgacctcggcaacggcccgtcgctgatgaagggtaactcggacaag
ccgctcaacgacaaccagtggcacaacgtggtggtctcccgggacgccaacaacgtgcac
acgctcaagatcgactcccgcaccgtcacccagcactccaatggagcccgcaacctggac
ctcaaaggggagctgtacatcgggggtgtggggaagagcatgtacaacagtctgcccaag
ctgatcgcgtcccgggacgggtaccagggctgcctggcctcggtggacctcaacgggaga
ctgccagacctgatcgcagacgccctccacagggtgggccaggtggagcgaggctgcgac
ggacctagcaccacctgtacggaggactcctgctacaatcagggcgtgtgtctccagcag
tgggagggcttctcctgcgactgcaccatgacgtcctatggaggctccttctgtagcgac
cctgggacaacctacatcttcgggagaggaggagccctcatcacatacacctggcccccc
aacgaccggccgagcacacgggcagaccggctggcggtgggattcagcacgcagctgaag
gaggccgtgctggtcagggtggaaagcgcagagggactgggagactacctggagctgcac
atagaacgaggaaggatcggcgtcatcttcaacgtgggaacggacgacatcgccatcgag
gagagtgcagtggcggtgagcgacggcaaataccacgtggtgcgcttcacgcgcagcggc
ggcaacgctaccctgcaggtggacagccagcccgtcatcgaacgcttccccacagggaac
tttgataatgagcgcctggctattgctagacaaagaatcccataccgacttggtcgggta
gttgacgagtggctactcgacaaaggtcgacagttgaccatcttcaacagccaggcgttc
atcaagatcggtggtggtggcggcgacaaggcccgtcacttccagggccagatctcgggc
ctctactacaacgggctgcaggtgctcaagctggcggccgagggcgaccccaacgtgcag
gccaagggcaacctgcggctggtgggcgacgtgccctcggtgctcaccacagacaccacc
agcaccacgccgctggccgacatgtccaccaccatcatggagacaaccacgaccatggct
accaccaccacccgcaagcagcgttcacccaccatgagggacagtgtcacacagaacacg
gatgatctgttggtagcatctgctgagtgtcccagcgatgacgaggacttggaggagtgc
gagcctggaaatggaggtgaattagtgttgcccataataacggtggactccctagacccc
ccatccatcgtcacccgctaccctgtaatccccccgccccccacctaccggcccctccta
cccttcctcgaaacgaccaaagagtccctccccctgcccaacggtcgccccccctgccca
ctggaccaggaggactgcgaggaggcgggacccatcgaggtgtccgcctacggctcgggt
gagatgaccgagtcggacgacgaggactattacaaaaactcccccctcgtcaccgacagg
acggtcctcccccctccccccaatgagagtggcatccataacccccacgaccgtcacttc
tcccaccggccccccaactcccaccgcccccctctgtcctccacccccacagccaacccc
aaccagctaggccccaggctcaacaagcccggcggcagcagcagcaaaaaccccgctggc
aagatgaacacccgggaccaggtgctgctgccgccctccaacccctcctcagaccctgac
cgccaccgccacgtcccaggcgtaacctaccctcccaatttcccccatgtgcccacccca
gaccccacctccccagagagaggagggcctcccggcgcagtagaagtaatcagggagtcc
agcagcaccacgggcatggtggtaggcatcgtggcggccgctgccctctgcatcctcatc
ctgctctacgccatgtataagtaccgtaaccgggacgagggatcctaccaggtagaccag
agccgaaactacatcagtaactcggccacgcagagcaacggcaccctggtgaaggagaaa
cagccgggcacagccaagacaaccaccaagaacaagaagaacaaagacaaggagtactac
gtctga

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