Oncorhynchus kisutch (coho salmon): 109906283
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Entry
109906283 CDS
T09179
Symbol
rnf169
Name
(RefSeq) E3 ubiquitin-protein ligase RNF169
KO
K20805
E3 ubiquitin-protein ligase RNF169 [EC:
2.3.2.31
]
Organism
oki
Oncorhynchus kisutch (coho salmon)
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
oki04121
]
109906283 (rnf169)
03400 DNA repair and recombination proteins [BR:
oki03400
]
109906283 (rnf169)
Enzymes [BR:
oki01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.31 RBR-type E3 ubiquitin transferase
109906283 (rnf169)
Ubiquitin system [BR:
oki04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
RBR proteins
109906283 (rnf169)
DNA repair and recombination proteins [BR:
oki03400
]
Eukaryotic type
DSBR (double strand breaks repair)
Other DSBR factors
Ubiquitin ligases
109906283 (rnf169)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C3HC4_2
zf-C3HC4_4
zf-C3HC4_3
zf-C3HC4
Prok-RING_4
zf-RING_2
zf-RING_UBOX
zf-RING_4
zf-RING_5
zf-RING_10
zf-RING_6
Motif
Other DBs
NCBI-GeneID:
109906283
NCBI-ProteinID:
XP_020359490
LinkDB
All DBs
Position
LG15:complement(45141455..45155720)
Genome browser
AA seq
658 aa
AA seq
DB search
MKMAATGSVRSTSGLGHKCKARPADMLKTRTHSQLLTLEEARCPVCSEILLEPVTMPCSH
SVCLHCFKRTVEFTSLCCPLCRLRVSSWARKQSREKSLVNVELWEMVRQSYPQRCKMRME
QRDCETGGEDIFRSPAQVSKSGEIRLEYGKQKVPINEEKEEGRRKVHHREGCGTLKHFQD
PFYGLLSDSENEEPIGKRTRNVSAFVRRTKISAGLHTNVVQRSQSCTDPEEGRRKMRVST
HLPGLDKASIAHSYNAGILLSSENSRSLSAPIIVQDKRHSWRGVIMASSTPFMVPQSKQE
RSISPESNDSISEELNHFKPIVCSPCTPPKRLPDGRVMEPTIVKSTPRNLFRSLERPTSY
EASPTILQKWKQIEVDRQSVKVTSKGTLTNPMNEDLVFKPSPIEEKDGKPCSCAPAANKG
KEHLVMCAKTDSSGQENERTCIHNKRRLIFDQAIGETALHQKHFTKFQTPFVALTSEETV
KECGVSFESVVVPELHCGPTSILQNPTVVPHDINASVRSCKLKSKDSQDQRKEFDNRNYA
QNQPTSRRGKKRSQKTKHLEETESGLKRPRSQSQDGCNIECAQAELYIQQVQQEREDREL
ALNLQRQFDREQQQEDKQKTSPDKYFLRSCMSSENRIKCNPRRSGRISKKNEHFNCYY
NT seq
1977 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatggcggcgacagggtccgtcagatccaccagtggattggggcacaaatgcaaa
gccaggcccgccgatatgctgaaaactcggacacattcacagctgctaaccttagaggag
gcaaggtgtccggtttgttcggaaattttattagagcccgtaactatgccatgtagccac
tcggtgtgtctgcactgtttcaagcggacagttgaattcaccagtctgtgctgtcccctc
tgccgactgcgagtatccagctgggcccgtaaacagtcccgggagaaaagcctagttaac
gtcgaactctgggaaatggttcgacagagttacccacaacgatgcaagatgagaatggag
cagagagactgtgagactggtggggaagacattttccgctcgcctgctcaggtatccaaa
tctggagagatccgactggagtatggaaagcaaaaagtcccaatcaatgaagagaaagaa
gaggggaggaggaaagtccaccacagagagggatgtggaactctcaagcactttcaagat
cctttctatgggttgctgtcagactcggagaatgaagaacccattgggaagagaaccaga
aatgtgtctgcgtttgttagaagaacaaagatctcagctggtctacataccaatgtggtg
cagagaagccagagctgtactgatccagaagagggaaggcgaaaaatgagggtatctact
catcttcctggactggacaaggcaagtattgctcacagctacaatgcaggaatccttctg
tcctctgagaacagccgatctctttcggcacccatcattgtccaagacaagaggcatagc
tggcgaggcgtcatcatggcgtcatcaacaccttttatggtcccccagtcgaaacaggag
aggtccattagccctgagagcaatgacagtatttctgaggagctgaatcacttcaagcca
atagtgtgttcgccgtgcaccccaccaaagcgactacctgacgggagagtgatggaaccc
acaattgtgaagtccaccccccggaacttattccgcagcctggaaaggcccaccagctat
gaagcgagccctactatcctccagaaatggaagcagatagaggtggaccgtcagtctgtc
aaagtgacctcgaagggtaccttgaccaaccccatgaacgaggaccttgtcttcaaacca
agccccatagaggagaaggacggcaagccctgtagctgcgctccagcagcaaataaggga
aaagaacacttggttatgtgtgccaagactgattcctctgggcaagagaatgaaagaact
tgtatacataataaacgaagactgatatttgatcaggccattggagagacagccttgcat
caaaaacatttcacaaagtttcaaactccatttgtagccttaaccagtgaggagactgta
aaagaatgtggggtttcttttgagtctgtggtggtacctgaattacattgtggaccaact
tcaattcttcaaaatccaaccgtagtaccacatgatataaatgccagtgttaggagttgc
aaacttaaatcaaaagactcacaggatcagagaaaagagtttgacaatagaaactatgcc
cagaaccaacctacctcaaggaggggcaagaagaggagccagaagaccaaacacctggaa
gagacagagtctggactcaagaggccaagatcccagagccaagatggttgcaatatagag
tgtgcgcaggctgaactgtatattcaacaggttcagcaagagagagaggacagagagcta
gcgttgaatcttcaaagacagtttgacagagaacagcaacaagaagacaagcaaaagacc
agtcctgacaagtactttctccggtcctgcatgtccagtgaaaacagaatcaaatgcaat
ccacgcagatcaggaagaatttccaaaaagaatgagcactttaattgctattattaa
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