Oncorhynchus kisutch (coho salmon): 109906405
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Entry
109906405 CDS
T09179
Name
(RefSeq) RNA-binding protein 4-like isoform X1
KO
K13189
RNA-binding protein 14
Organism
oki
Oncorhynchus kisutch (coho salmon)
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
oki03041
]
109906405
Spliceosome [BR:
oki03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
109906405
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_5
RRM_7
zf-CCHC
Motif
Other DBs
NCBI-GeneID:
109906405
NCBI-ProteinID:
XP_020359670
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All DBs
Position
LG16:complement(16978513..16998584)
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AA seq
654 aa
AA seq
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MDKSNTVKLFVGNLALDTTQEELSAIFEAYGQVVSCSVLRQFAFVHLQGEGAAERAIREL
NGREFRGRNLVVEESRGRPLHSTKVFVGNLSGMCTTEDLQELFQTFGKVLECDKVKARLS
SSAGYAFVHMENKEEALQAIEALHGTSFKGRPLSVELSKVQPSKQTPTGKIPCVSCGKQG
HYAGECPVGKSSLEQYQSQAAVLAAAAAAAAGLPLQVQQSVHNSVYNTSTFDPTYAALTG
LTTGTRAEGNPVNQAVYGALATQVYGANVANQLYGVQAANQAAALTQAGATQVYASSMNP
SHAALYGQLSQIAASPAAASAAAAYSTPVYAHAMANHHHPGAIYLAAPGVEMPAAAAAVN
QAYAMAPALYGGAQHAYGHLGMGAAMSASADPSAAIFEAARVQHYFAQGQQVLAEQQNAA
AVAAAQAAKSGERDRSPLRRSAGSLLPDPVMKPFIYQRAPKQRRPLLPTPAGRAAEEAAE
AGEDPMAREQCQQYAEYNHQQYQQLQHLQEQYQQYAEYYHQQHQQHQQLQQLQYYAEYYQ
QYQQYQQLQQYQQLQQYQQLQQLQYAYPPPNHHAMAAIPAHAMAGHAHHHGQPAHVTALD
AALRPVVPASAVAAAMVAAPRVYEPPLPPPPNRKEAVLRRAPELSLHTPEPPFR
NT seq
1965 nt
NT seq
+upstream
nt +downstream
nt
atggacaagagcaacacggtgaagctcttcgtgggcaacctggctctagataccacccag
gaggagctatcggccatctttgaggcgtacggccaggtggtcagttgcagcgttctccga
cagttcgccttcgtacacctacagggtgagggtgctgcggagcgggccatcagggagctg
aacggcagggagttccgggggaggaacctggtggtggaggagtcccggggcagaccgctc
cactccaccaaggtgtttgtggggaacctgtcaggcatgtgcaccaccgaggacctccag
gagctcttccagacctttggtaaagtgctggagtgcgacaaagtcaaagccaggctctcc
tcttctgcaggctacgccttcgtgcacatggagaacaaggaggaggctcttcaggccatc
gaggccctccacggcacctccttcaaaggacgcccgctctccgtggagctctccaaggtg
cagccctccaagcagaccccgacggggaagatcccctgtgtgagctgtgggaagcagggc
cactatgccggggagtgccctgtagggaagtcctctctggaacagtaccagagccaggcg
gctgtgttagctgcagctgccgccgccgccgccggcctgcccctccaggtccagcaaagc
gtccacaactctgtctacaacacctcgacctttgaccccacctacgcggcgttgacgggc
ctcaccaccggcacgcgggcggaaggaaaccccgtcaaccaggcagtgtatggtgccctg
gcgacgcaggtctacggcgctaacgtggccaatcagctctatggggtccaggcagccaat
caggcggcagcgttgacgcaggcgggcgccacgcaggtgtacgccagctccatgaacccc
agccacgccgctctctacggtcagctcagtcagattgccgccagccccgctgcagcatcc
gctgccgccgcctactccacaccagtttacgcgcatgccatggctaaccaccaccacccg
ggggccatctacctggctgcacctggcgtagagatgcctgcggccgccgcggcagtcaac
caggcctacgccatggcgccggcactctatgggggcgcccagcatgcctacggccacttg
gggatgggtgccgccatgagcgcatcggcggacccgtcggcggccatctttgaagcggcg
agggttcagcactacttcgcccagggacagcaggttctggccgagcagcagaacgcggcg
gcagtggctgcggcacaagcggcaaagtctggagagcgggaccggagtcccctgaggcgc
tctgcggggtccctgctgcccgatcccgtcatgaagcccttcatctaccagagagccccc
aagcagcgccggccgttgctccccacccccgccgggcgagctgcagaggaagcagcggag
gctggagaggaccccatggctagagagcagtgccaacagtacgctgaatacaaccaccaa
cagtaccagcagctccagcacttacaagagcagtatcaacagtatgctgagtactaccac
cagcagcaccaacagcaccagcagctccagcagctacagtactatgcagagtactaccag
cagtaccagcagtaccagcaactccagcagtaccagcaactccaacagtaccagcaactc
caacagctccagtacgcctacccgcctcccaaccaccacgccatggctgccatccctgcc
cacgccatggcgggccacgcccaccaccacggccaaccggcccacgtcacggcgctggac
gccgccctcaggccagtggtgcccgcctccgccgtggccgccgccatggtggcagcgccc
agagtgtatgagccgccgctgccgccgccaccgaaccgcaaggaggccgtcctccgccga
gcccccgaactctcccttcacacgcctgagccccccttcagatag
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