Oncorhynchus kisutch (coho salmon): 109906512
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Entry
109906512 CDS
T09179
Name
(RefSeq) protein transport protein Sec24D
KO
K14007
protein transport protein SEC24
Organism
oki
Oncorhynchus kisutch (coho salmon)
Pathway
oki04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
109906512
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oki04131
]
109906512
Membrane trafficking [BR:
oki04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
109906512
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec23_trunk
Sec23_BS
Sec23_helical
zf-Sec23_Sec24
Gelsolin
GDP_Man_Dehyd
Motif
Other DBs
NCBI-GeneID:
109906512
NCBI-ProteinID:
XP_020359825
Ensembl:
ENSOKIG00005018397
UniProt:
A0A8C7HB31
LinkDB
All DBs
Position
LG16:24257278..24289767
Genome browser
AA seq
1038 aa
AA seq
DB search
MSQQGYVATPPYSQAQPGMGGYPAGFGSAPAQPLYRHYGGPPQSFPAPPTGMMKPVSSPS
GMPPPQVPSHYGSNGQQNGAHPQSYPAPPYGQPLQSPYHSMAHQGPPPAQQLTNQMGAMN
LGYGPGAVQSPQAPPTSHLTQQQFQTSPPTAMGHPPMGPHSSQMAHPQSPLAGPTMAGPQ
SMGGPPPMGGMGRPFPGPPPPGAGGFQQPGPGAAGPPGHPQQLQGQFGGQMAGPGMAGPG
MAGPGMAGPFQGGAAQMAGPPQKKLDPDSIPSTTQVIEDDQAKRGGQVYTTNLRGQVPPL
VTTDYTVQDQGNASPRFMRCTTYSFPCTADLAKQCQVPLATIIKPFATVPKNETPMYVVN
HGETGPIRCNRCKAYMCPYMQFTDGGRRYQCGFCNCVNEVPAFYFQHLDHMGKRVDFYER
PELSLGSYEFAATLDYCKNNKPASPPAYIFMIDVSYANIKSGLVRLVCDELKTLLDNLPR
EDGAESSMVKVGFVTYNKILHFYNVKSALAQPQMMVVSDTAEMFVPLLDGFLVNFQESRA
VINNLLDQIPDMFADTNESETVFAPVIQAGVEALKAAECSGKLFIFHSSIPTAEAPGKLK
NRDDKKLINTEKEKTLFQPQKAVYEQLSKDCVSQGCSVDLFLFPSQYVDIATMGDVATHT
GGSVFKYSNFQVERDGQHFLSDLRKDVEKAIGFDAIMRVRTSTGFRATDFFGAIHMNNTT
DVEMAAVDCDKAVTVEFKHDDTLSEETGALMQCALLYTTISGQRRLRIHNLSLNCSAQLS
ELYKSCETDALINFFAKSAYRAMLNQPLKTVKEILVNQAAHMLACYRKNCASPSAASQLI
LPDAMKVFPVYLNSLLKTGPLVGSAELSTDDRAHQRLSTTAMGVEDTQLLLYPRLIPLHN
MDVASDVVPTPVRCSEERLTDAGMFLLENGCSLFLWLGQACPPEMIQSIFNVPSLAHVSI
DLRSLPELDNPQSQKLRSIVDSLLDQRPSSMKLMIVKQKDRSEIMFRQHLVEDKGLHGGA
SYMDFLCYVHREIRQVLT
NT seq
3117 nt
NT seq
+upstream
nt +downstream
nt
atgagtcagcagggttatgttgccacacctccctattcccaggcccagcctgggatgggg
ggatacccagccgggtttgggagcgcgcctgcccagcccctctatagacactatggggga
ccacctcaatcattccccgccccaccaacaggtatgatgaagcctgtgtcgtccccttcc
ggcatgcctccaccacaggtccccagccattacggctcaaacggccagcagaacggagct
caccctcaaagctaccccgcccctccgtatggacagccacttcagtccccctatcacagc
atggcccaccagggtcctcccccagcacagcagctcaccaatcagatgggtgccatgaac
ctcggatatggtccaggggccgtgcagagccctcaagcacctcccacctctcacctaacc
cagcagcaattccagacttcccctcccacagccatgggacatccacccatgggcccccac
tcgtctcagatggctcacccacaatcacccctagctggtccaactatggcagggccccaa
tctatgggtggccccccgcccatgggaggcatgggtaggcccttccctggcccaccccct
ccaggtgctgggggcttccagcagcctgggcctggagctgccggaccaccaggacatcct
cagcaactacaaggtcaatttggggggcagatggcgggacccgggatggcgggacccggg
atggcgggacccgggatggcgggacccttccaaggtggggcagcacaaatggccggccca
cctcagaaaaagctggatcctgactccatccctagcacaacacaagtcatcgaggacgac
caagccaaacgagggggacaggtgtacactacgaacctcaggggccaggtgcccccgctg
gtcaccactgactatacagtacaggaccaaggaaacgccagcccaaggttcatgcgttgc
accacatactctttcccctgcacggctgacctggctaagcagtgccaagttcccctggcc
accatcatcaaacccttcgccacagtgccgaagaatgagactcctatgtacgtcgtgaac
catggtgagactggcccaatccgctgtaaccgctgcaaggcctacatgtgtccctacatg
cagttcacggacggtggccgccgttaccagtgtggcttctgcaactgcgtcaacgaagtg
ccagccttttatttccaacacctggaccacatgggcaaaagggtggacttctatgagagg
ccagagctgtcgctggggtcctacgagttcgccgccaccctggattattgcaagaacaac
aagccagccagtcctccagcgtacatcttcatgatcgacgtgtcctatgccaacatcaag
agcggactggtcagactggtgtgtgatgagctgaagaccctgctagacaacctgcccaga
gaggatggtgctgagagctcgatggtgaaggtgggcttcgtcacctacaacaagatccta
catttctacaacgtgaagagtgccctggcccagccccagatgatggtggtatccgacacg
gcagagatgttcgtcccgctgctcgatggcttccttgtcaacttccaggagtcgcgggca
gtcatcaacaatctcctagaccagatccctgacatgtttgccgacaccaatgagagcgag
acggtctttgcccccgtcatccaggctggggtagaggcactgaaggcagcagaatgcagc
ggcaagctgttcatcttccactcctccatccccaccgctgaggcccctgggaaactgaag
aacagggacgacaagaagttgataaacacagagaaggaaaagactctgttccagccccag
aaggctgtctatgagcagctgtccaaagactgtgtgtctcagggctgcagcgtggacctc
ttcctcttccccagccagtacgtggacatcgccaccatgggagacgttgccacacacaca
ggtggctccgtcttcaaatacagcaacttccaggtggagagggatggacagcatttcctg
agtgacctgaggaaggatgtggagaaggccatcgggtttgatgccatcatgagagtccga
accagcacaggcttcagggctacagacttctttggtgccatccacatgaacaacaccacg
gacgtggagatggctgccgtggactgtgacaaggctgtgacggtggagttcaaacacgat
gacacacttagcgaggagacgggcgctctcatgcagtgtgcattgctgtacacgaccatc
agcggccagcggcgtctgcggatccacaacctcagtctgaactgcagcgcccagctgtct
gagctctacaagagctgtgagacggacgccctcatcaacttcttcgccaagtcagcatac
cgtgccatgctgaaccagcccctgaagacggtgaaggagatcctggtcaaccaggcggcc
cacatgctggcctgctacaggaaaaactgtgccagtccctccgctgccagccagctgatc
ctgcctgatgccatgaaggtgttcccagtctacttaaacagcctgttgaagactggtccc
ctggtgggcagcgctgagctctctacagatgacagggctcaccagagactcagcaccaca
gccatgggggtggaggatacccagctgctgctctatccacgccttatcccactgcacaac
atggacgttgccagtgacgtggtgccaactccggtgcgctgctctgaagagcgcctgaca
gatgccggcatgttcctgctggagaatgggtgctccctcttcctgtggctgggccaggcc
tgccccccagagatgatccagagcatcttcaacgtgccctccctcgcccatgtgtccatt
gacctgaggtccctaccagagctggataacccccagtctcagaagctgcgctccatcgtt
gactccttgcttgaccagaggcccagctccatgaagctcatgattgtgaagcagaaggac
cggtctgagattatgttccgccagcacctggtagaggacaaggggctccacggtggagcc
tcctacatggacttcctgtgctatgtccaccgcgagatcagacaagtcctcacttaa
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