Oncorhynchus kisutch (coho salmon): 109906522 Help Entry 109906522         CDS       T09179                                  Symbol focad Name (RefSeq) focadhesin isoform X1   KO K27498   focadhesin Organism oki  Oncorhynchus kisutch (coho salmon) Brite KEGG Orthology (KO) [BR:oki00001]  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:oki03019]     109906522 (focad) Messenger RNA biogenesis [BR:oki03019]  Eukaryotic type   mRNA degradation factors    3'-5' decay     Other 3'-5' decay factors      109906522 (focad) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Focadhesin DUF3730 RTP1_C1 Htt_N-HEAT_1 Motif Other DBs NCBI-GeneID:  109906522 NCBI-ProteinID:  XP_020359838 Ensembl:  ENSOKIG00005025030 LinkDB All DBs Position LG16:complement(25656689..25723415) Genome browser AA seq 1814 aa AA seqDB search MSENLKKRFDFPSPLIQAQTVRSLVAAVLKEKGQNERIGQSSTQGPAMEALWEQCCSDCA AVRSACCDAVVLLVEQAHADLHYILNSVLNLLPSARNVQGLIKVIGRLLQVQADQRDKGT PFTCPYSIRTSPHPYIIVLENRPDCWPVLLLEIDDFIQRAADRGESAYVTMLAPFLRYLY CEPQRLPEYALLRHSLLRVLLPPQPGDHNQEKKKDQETEEDPGQSPVVCHSLVRCLYELV PHMQVDSVEAVLELRGLVEAMIPALEVADWGSERAQLALQLLCACQLSLKLSGDCRPLLQ LLHQLLPTRTEEFPVEDMMVGLALLLLEASASQQTGLLTLALSLAPPECERPPWGTPVLV LPLLQVLSCSSLMEPLTDSRTHTRNQSLAQSLLQNAQRESSKPAEKVSQLALPLSPWSSE LLVATQVLRQVTGDPVAASEWLLAVTSALPLSQRVPSPLTLTVAHLVVTGQQDVCRLALK TAAAIAQADPAQVPSLLHVLLFKLGKECDPDLSHAVLYSLPNFGTHKFCLPQVLHTLQML GSAPKLRAVVLRLMTALWEKQDRVYPDLQRLISQFEKSVLLGKEAQWEQILARAACVRDI CRERPYQHGGDMLAAITHTLAQCSRPDQAAPAALALQGLHELCRTEVVDVGSTWTALGPK LSCDSRPLVVKAIAELLALLPQLTVKTEEYEKLKEQFVSFLWGYALNKEPEVASCGYKAL SEFSEAAHTLLHLPEQARPVAKLPESVEEEQVKEKEEEEEEEDLSIPGPSYVKLLGLTSL SVLPAFELFLTSLVRQEMSQMPRGVYHSALKRGSLRSDQGKTVAGIPGFMLKTYEKSKQP GLKPGLAAGLLLSFDLPVQTDRDGRPINRFLLSRGRSYQQMLATLIHEVNIQPSEWHRAL LLPQAWRGFMSRAYHSVLQGRRAELEMQQKQGKESPEELQYKQHCAWLWVRDQLTDVVKS AAKDSPVVQGNSILALSSLASVLAKYESNMPADTEGGLGVGPEILSTSTWLAMVLDTLLS IVSSSYKPRGQVFPWFLHRSYSGENTASAIARSCAALALSLVVPVLVAWHKDSVPQVLAT LRAGLPGSPTADDSQAVQFHSGLALGMLLSCLHQERLSDVSGQKITELLMSSLDTLEACC FDSNLEYNAGCVLGLGLVLGALSGSGQTEHRARVGLTLDKLLEALQGDSSSQGRMLQEVL AYSVAGVGVAAFSGGVVDALKSEEIMSTLRSMTEESQQTPGFSLALGLVVHGLSSCGHGK AEDIQPRLLDAWIKILLAEGCPTMQRLAAVNGLVALVGSETGILQLKNESEQSSQQQSRM NEVIRAITQIITFSGAIGLQSNSACLVGHLHLAHMSTSHSRTAVPQDFSYLPEKSVIRSA VDFLTEAGKKGPEFAHPSLVKTALASLATVGGSYQYPPVNWSAILSPLMRLNFGEVVQHQ CIELASNQAQSSQSASLFLGVWLSPPLVQSLSMWTRGHLYDNLSVWMKHVAEDKLQVYLE TLGLQQFQQDVRPQRLAICLSLLRGLAQAMALPNPPNTVWAVLCTTIEKIFNVLPNHIQD QEVHLYVGVSKCLSELADTEIDRIAQVTEKQMEKTSFILAHLTSQGRVPLLGLNDVIAAV LRGWSSHKVGWLLLQTFYQCRLAASPNTGVSKRMEWLLELMGLIRNVAYGVTAVKCRDTR QATDFLLQVFAAAVISWGDHTMPLLLGVRTQWFPWQQGSEPPGLPHTLYGDAVLAEQSVS LCLLGLPHSLRQLLAKEPWREQSQKFIDWLFSITEGPETGLSDTSINTAKAALLALKSST DFKKKAVWTRAYGW NT seq 5445 nt NT seq  +upstreamnt  +downstreamnt atgagtgagaatttgaaaaagagatttgactttcccagcccgctcatacaggcccagacg gtgaggagtctggttgcggctgtgctgaaagagaagggccagaatgagaggatcggccag tcctccacccagggcccagctatggaggccctgtgggagcagtgctgcagtgactgtgct gctgtgcgctcagcctgctgtgacgccgtggtgctcctggtagagcaggcccacgctgac ctgcactacatactcaacagcgtcctcaacctcctgccctccgccaggaatgtgcagggg ttgataaaagtgataggaaggcttctccaggtgcaagcggaccagcgagacaaaggaacg cccttcacttgtccctactccatcaggaccagcccccatccatacatcatcgtcttggag aaccgtcctgactgctggcccgttctgctgctggagattgacgacttcatccagcgggcc gctgacaggggtgagtctgcgtacgtgaccatgttggccccctttctgcgctacctgtac tgtgagccccagcggctgccagagtacgctctgctcagacacagcctcctcagggtccta ctgcccccccagccgggggatcacaaccaagaaaagaagaaagaccaggaaactgaagag gacccgggacagagccctgtggtatgccacagcctggttcgctgtctctacgagctagtt cctcacatgcaggtggacagtgtggaggcagtgttggagctgcggggcctcgtggaggcc atgatcccggctctggaggtggccgactgggggagtgagagggcccagctggccctgcag ctgctgtgtgcctgtcagctaagtctgaagcttagcggagactgcagaccactactccaa ctactgcaccagctcctccccacccgcacagaggagttccctgtggaggacatgatggtg ggcttggctctgctccttctcgaggcctcagcgtcccagcagaccgggctgcttacactg gccctaagtctggcccccccagagtgtgagcgacccccctggggtaccccggtgctggtg ctgcctctcctgcaggtcctctcctgctcatccctcatggagcctctgacggactcccgc acacacacacgcaaccagagcctggcccagagcctcctacagaatgcgcagagagagtcc tccaagcctgctgagaaggtgtcccagttagccttacccctcagcccgtggtccagtgag ttgctggtggccacccaggtcctacgccaggtgacaggggacccggtggcggctagcgag tggctcttggcggtgacctcggccctgcccctgagccagcgcgtcccgtctcccctcacc cttaccgtggctcacctggtggtcaccggtcagcaggacgtctgcagactggccctgaaa accgcagctgccatcgcccaggcagaccccgcacaggtcccatcccttcttcatgttctg ttgtttaagttggggaaggagtgtgacccagacttgtcccacgctgtgctgtactcgctg ccaaactttgggacccataagttttgtcttccccaggtgctccacactctccagatgctg ggcagcgcccccaagctgagggccgtggtactgcgcctcatgaccgctctgtgggagaaa caggaccgtgtgtaccctgacctccagaggctgatctcccagttcgagaagtctgtgctc ctggggaaggaggcccagtgggaacagattctagccagggctgcctgtgtcagagacatt tgcagagagaggccctaccagcacggaggggacatgctggctgccatcacacacactctg gcccagtgttccagaccagaccaggccgcccctgctgccttggccctgcaaggtcttcac gagctctgccgcaccgaggtggtggatgtgggctccacatggacagccttgggccctaag ctgagctgtgactctagacctctggtggtcaaggccatagcagagctcctggctctgctg ccacagctcactgtcaagacagaggagtacgagaaactcaaagagcagtttgtcagcttt ctctggggctacgctctcaacaaggaacctgaggtggccagttgtggatacaaggctctg tcagagttctcagaggccgcgcacacgctccttcacctccccgagcaggccaggccagtc gcaaaacttcctgaaagtgtggaggaggaacaggtaaaggagaaagaagaggaggaggag gaggaagatttgtccattccaggtccatcctatgtgaagctcctaggtctcacatccctc tcagtcctgccagcatttgagctcttcctgacctcactggtgaggcaggagatgagccag atgccccgtggggtgtaccactctgccctgaaaagggggagcctccggtcagaccaggga aaaacggtggcagggatcccaggcttcatgctgaaaacctatgagaagagcaaacagcct ggtctcaaacctggcctggcagctggcctccttctctcctttgacttgcccgtccagacc gaccgagatggacgaccaatcaaccgcttcctcctcagcagggggcggagctaccagcag atgttagccactctcattcacgaggtgaacattcagccatcagagtggcatcgggccctc ctcctaccccaggcctggcgagggttcatgagccgagcgtaccattccgtcctacagggc cgtcgggcagagctggagatgcagcagaagcaaggcaaggagagtccagaggagctgcag tacaaacagcactgtgcctggctctgggtcagggaccagctgactgatgttgtcaaatct gcagcaaaggacagtccggtggtgcaggggaactccatcttggctctgagcagtctggct tcggtgctggccaaatacgagagcaacatgcccgctgacacggagggaggacttggggtg ggccctgagatcctgtccacatccacctggctggccatggtcctggacactctcctcagc atcgtcagcagcagctacaagcccagaggacaagtcttcccctggttcctacaccgatcc tactcgggagagaacacggccagtgccatcgcccgctcctgtgccgccctggccctgtcc ctggtggtgcccgtgctggttgcctggcacaaggacagcgtgccacaggtcctagccacc ctgagggcggggcttcccggctcgcccaccgcagacgactcccaggccgtccagttccac tctggcctggccctgggcatgctgctgtcctgcctgcaccaggagaggctcagtgatgtg tcaggtcagaagatcacagagctgttgatgagttctctagacactctggaagcctgctgc tttgacagcaacctggagtacaatgcgggctgtgtgctgggactaggcctggtgctgggg gcccttagtggcagtggacagacagaacaccgggcccgtgtgggcctcaccctggacaag ctgctggaggccctacagggggacagcagcagtcagggtcgcatgctgcaggaggtgttg gcctactctgtagcaggtgtgggggtggcagccttcagtggaggggtagttgatgccctt aaatcagaggagatcatgagcactctccgtagcatgacagaggagagccagcagactcca ggtttctcattggctcttggcctggttgttcatggtctgtcatcctgcggccacggcaag gcagaggacatccaaccccgccttctggatgcctggatcaagatcctactggctgagggc tgtcccaccatgcagaggctggctgctgtcaacggcctggtggctctggtgggatcagag actggcatccttcagctgaagaatgaatctgagcagtcctcccagcagcagtccagaatg aacgaggtcatacgggccatcacacagatcatcacattctcaggggccatcgggctgcag tctaacagtgcctgtctggtggggcacctccacctggcccacatgtccaccagccacagc cgcacagcagtgccccaggacttcagttacctcccagagaagagtgtgatcaggtctgct gtggacttcctcaccgaggcaggaaagaaaggtccagagtttgcccaccctagcctggtg aagacagccctggcctccctggccacagtgggagggagttaccagtacccccctgtcaac tggagcgccatcctgtcccctctcatgaggctcaactttggtgaggtggtccaacaccaa tgtatagagctggcatccaaccaagcccagtcttcccagagtgcatctctcttcctgggg gtgtggctgagccctcccctggtccagagtcttagtatgtggacgcgaggtcacctatac gacaatctctctgtatggatgaagcacgtggcggaggacaagcttcaggtttacttggag accctgggtctgcagcagttccagcaggacgtccggccccagcgcctggccatctgtttg tccctcctccggggcctggcacaggccatggccctccccaacccgcccaacaccgtctgg gctgtcctgtgtactactatagagaagatcttcaacgtactccccaaccacatacaggac caagaggtgcacctgtacgtgggagtctccaaatgtctgtccgagttggctgacacagag atcgaccgcatcgcccaagtcacagagaaacagatggagaagaccagcttcatcctggct cacctcacctctcagggccgagtgccactcctgggcctcaacgatgtcatcgcggccgtg ctccggggttggtccagccacaaggtgggctggctcctcctgcagactttctaccaatgc cgtctggccgccagccccaacacaggtgtgtccaaacgaatggagtggcttttggagctg atgggactcataagaaatgttgcttacggagtgaccgctgtcaagtgtagagacaccagg caggccactgacttcctgctccaggtattcgctgcggcggtgatctcctggggcgaccac accatgcccctccttctgggcgttaggacccagtggtttccatggcagcaggggtcagag ccgcccggtctacctcacactctctacggtgacgccgtgctggccgagcagtcagtctcg ctatgcctgttgggattgccccacagcctgaggcagctattggctaaagagccctggagg gaacagtcacagaagttcatagattggcttttcagcatcactgaaggtccggaaactggt ctgtcagacacttccatcaacactgccaaagctgccttgctggctctgaagtcctccacg gatttcaagaaaaaagcggtgtggacgcgagcgtacggttggtga

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