Oncorhynchus kisutch (coho salmon): 109906544
Help
Entry
109906544 CDS
T09179
Name
(RefSeq) DENN domain-containing protein 4C isoform X1
KO
K20163
DENN domain-containing protein 4
Organism
oki
Oncorhynchus kisutch (coho salmon)
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oki04131
]
109906544
Membrane trafficking [BR:
oki04131
]
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
109906544
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DENN
uDENN
dDENN
PPR_2
DUF2464
PPR_3
PPR_long
PPR
CA109-like
Motif
Other DBs
NCBI-GeneID:
109906544
NCBI-ProteinID:
XP_020359876
Ensembl:
ENSOKIG00005026700
UniProt:
A0A8C7HTU3
LinkDB
All DBs
Position
LG16:complement(26199537..26273643)
Genome browser
AA seq
1975 aa
AA seq
DB search
MIEDKGHRVTDYFVVAGLTDKSTPLEQDLSETKSSGPKAPITDLAVINKSAGETVPEGFT
CMESTYSGQQANLNHGSLKSHELFLCYKRDRDKPPLIDIGVLYEGKERLIQGCEVIQATP
YGRCANVNNSSATSQRIFITFRRAPPVQPQNSLAVTDICVIVTSKGETPPHTFCKVDKNL
NCGMWGSSVFLCYKKSVSASNSINYKAGLIFRYPEDDYESFPLSESVPLFCLPMGAKIEC
WAPNTRYPLPVFSTFVLTNSSGEKMYGAAIQFYEVYPIDLLSEKQKVQLGLLTTVEKKVI
PNRTVNTNKCICLLSRWPFFESFRKFLMFLYKLSVSGPHPLPIEKHISHFMHNVSFPSPQ
RPRILVQLSAHDTLMLAQPVCTPLPLSGADYSTLLMNLGSENCATLLHFVLLESKILLHS
LRPAVLTGVAEAVVAMIFPFQWQCPYIPLCPLSLAGVLNAPFPFIVGVDSRYFDLYDPPP
DVVCVDLDTNTIYLSDEKRHSNWKNLPKKPCKSLFNSLANLHHQLGIVRRTAQEGLAVEM
TPIEADFTWHKKMTSLEMEIQEALLRFMANILKGYRSYLKPITQAPSEKATSADSLYDLQ
GFLRSRERTHQKFYSQLTKTQIFIRFIEECTFVSDKDTGLAFFDDCIEKLFPSDKGNDKG
TKVEGEASEDTKLMELDESQKSEHTVFVMPPEPPATEEGSDPPAHYSYKSFPRLCMDLFD
RPREVIPALRSSTPGASLSSSPALLAKRTKQEIKLAYKMAKRFYSNPPLWAKCLFSHCYS
LWFICLPVGVRLAQSKSWAMQQAYNVLLKMRTSEVEVLDEVCYRVVMQLCGVYGQPVMAV
RVLVEMKKAGVHPNAITYGYYNKAVLEGPWPSRNRSGLFMWAKVRNVARALSQFKQAVHR
TPAMEGPTVITTACSGSDLGPSAGGLASSDGDRLSHGSADSSSEANGEDHTLFARSLIIA
DTADNHCSGGVQSDQGYGSKDELHQDLVDLAQSAALVIAVDQCSKSAAQHNGGDIAGSVD
SAVAVAEPPSPVKALPHVPSIVKLSTGASFDTAMKRGDAAPGKLFSLRSQSEDISLPVEG
RSAAPGGSGVAGPAVQVQRQKAFSERSCSFSAESRAGMLMEKHGVDHIVSRMGADARILA
AALSGGGTTPPPSKPLPSAAKALFKDLELESEEGRCPTLGKLSEEEGPATDPTPLEEGLG
KEEKRMKGDRKEAGGEDEMGLKLEEEDEERDSGGRGSISLPTLEIKEVQVGADPLSLLVS
EHEELASVTSQELPQSLPAMVSRNLADEIEMYMSLRSPLGPKSCSMELHQEGQGGDPSPD
AAPVKQPQERRSSLPVPPVKHPGGSSGDTTPKRSPAAVTRSKTFAVKASRSPASSRGVVA
SPRSSPLTALVRSSQSGSLGSVINSISGMKMDTLLSGPKIDVLKSGMKQAGNLASKVWGA
VASAYSYSDDEDELGPGYRERVSFPAGLDESMLLGGGGSDSPTHRGPTQGLVSNGLTQSS
TSLGSSSGSSDTGRGAHSTHVTPGRPGRGPDSERSDQGSHHTSSSSIYQNCALEVLMSSC
SQCRSCECLVYDEEIMAGWTADDSNLNTTCPFCRTAFLPLLHVEFHDLRTTTAFYLNPSA
SGDSIHSTSQQATATGSTENKVGAAMDTPTPGLISFPESEDPGEAPASQTATHKSLIPEP
AQSDPLGLLEHQAGKRGASLTRSNSVGGPLQSLVAQREPGHSVSTTSLPCSLTEMDGLGQ
KRPNPMPVSVPYLSPLVLRKELETLLENEGDQVIYTHKFLSQHPIIFWNLVFYFQRLDLP
SYLPGLILTSEHCNNGVQLHQTSLSQDSKQVYVQLLWDNINLHQEPGDPLYQSWRTLMEK
KGTLAPTDYQETRTLLNSIVRSIQTNDVYGPINLLLREVKRNPEVKRQRGIYREILFLAL
VALGRENIDVEAFDREYRLAFDELSPEQLKALHKIDRPPNTNVQWCLKCFGAPVI
NT seq
5928 nt
NT seq
+upstream
nt +downstream
nt
atgattgaggacaagggccaccgtgtgaccgactactttgtggtggccgggctgacggac
aagtccacgcccctggagcaggacctgtcggagaccaagtccagcgggcctaaggcgccc
attactgacctggccgtcatcaacaagtcggcgggagagactgttcccgagggcttcacc
tgcatggagagcacctacagtgggcagcaggccaaccttaaccacggcagccttaagagc
cacgagctgttcctctgctacaagagggaccgcgacaagcccccgctcatcgacatcggt
gtgttatacgaagggaaggagcgtctcatccagggctgtgaggtcattcaggccacgccg
tacggacggtgtgccaacgtcaacaacagctctgccacctcgcagcgcatcttcatcacc
ttccgccgcgcgccgcccgttcagccccagaactcactggccgtcaccgacatctgcgtc
atcgtcactagcaagggcgagacgccgccgcacaccttctgcaaggtggacaagaacctc
aactgtggcatgtggggttccagtgtttttctgtgctacaagaaatcagtgtccgcatcc
aactccatcaattacaaagccggcctcatcttccgctacccagaggatgactatgagtcc
ttccccctgtctgagtctgtgcccctgttctgcctccccatgggggctaagatcgagtgc
tgggcccccaacacacgctaccctctgcccgtcttctccacctttgtgttaaccaactcc
tctggggaaaagatgtacggcgcagccatccagttctacgaggtctaccccatagatctc
ctcagtgagaagcagaaggtgcagctgggcctgctcaccaccgtggagaagaaggtgatc
cccaaccggacggtcaacaccaacaagtgcatctgcctgctctcccgctggcccttcttc
gagtctttccgcaagttcctcatgttcctctacaagctgtccgtctcgggtccccaccca
ctgcccatcgaaaagcacatctcgcactttatgcacaacgtgtccttcccttcacctcag
aggcccagaatcttggtccaactctctgcacacgacaccttgatgctcgcacaacctgtg
tgtactcctctccctctcagtggggcagactacagtacgttgctgatgaacctgggctct
gagaactgtgccacgctgctgcactttgtcctgctggagagtaagatcctgcttcactcc
ctgagacccgctgtactcaccggggtagcagaggccgtagtggcgatgatcttcccgttc
cagtggcagtgcccgtacatccccctctgcccgctctccctggcgggggtcctcaatgcc
ccctttcccttcatcgtgggcgtggactcccgctactttgacctttatgaccccccgccg
gacgtggtctgtgtggacctggacaccaacactatttacctgtctgatgaaaagagacac
agtaactggaaaaacctcccaaagaaaccctgcaagagcctgtttaactccctggccaac
ctgcaccaccagctgggcatcgtgcgtcggacagcccaggagggcttggcggtggagatg
acccccatcgaggcggacttcacctggcacaagaagatgacctccctggagatggagatc
caagaggccctgctgcgcttcatggccaacatcctgaagggctaccgctcttacctcaaa
cccatcacccaggccccctccgagaaggccacctccgcagactcactatacgacctacag
gggtttctgaggagcagggagcgcacccaccagaagttctactcccagctgaccaagact
cagatcttcatccgcttcattgaggagtgcacgttcgtcagcgacaaggatacgggcctg
gccttcttcgacgactgcattgagaagctatttccctccgataaaggcaacgacaaaggc
actaaggtggagggtgaggcctcagaggacaccaagcttatggaactagacgaatcacag
aagagcgagcacactgtcttcgtcatgcccccagaaccccccgccaccgaggaagggtcc
gacccccctgcccactacagttataagagttttccacggttgtgtatggacctgtttgac
cgccccagggaggtgataccagcgctgaggagtagtacacctggggccagcctgtccagc
agccctgcactactggccaagaggaccaagcaggagatcaagctggcttacaagatggcc
aagcgcttctactccaaccctccgctgtgggccaagtgtctgttcagccactgctacagc
ctgtggttcatctgcctgcccgtgggggtgaggctggctcagtccaagagctgggccatg
caacaggcctacaacgtcctgctcaagatgaggacatctgaggtggaggtgctggatgag
gtgtgttaccgtgtagtgatgcagctgtgtggcgtgtacggtcagcctgtcatggccgtc
cgtgtcctggtggagatgaagaaggcaggggtgcaccctaacgctatcacctacggatac
tacaacaaggctgttctggaaggcccctggcccagtcggaaccgcagtgggctcttcatg
tgggccaaggtgcgcaacgtggcgcgcgctctctctcaattcaaacaggcagtccaccgg
acgcccgccatggaaggacccaccgtcatcacgacagcttgctcaggaagtgatttaggc
ccgtcagcgggcggcttggcgagcagcgacggcgaccggctgagccacgggagtgcagac
agctccagcgaggcaaacggagaggatcacaccctgttcgcacgcagcctcatcatagca
gacaccgcagacaaccactgcagcggaggagttcagtctgatcaaggctacggctctaaa
gatgagttgcaccaggacctagtggatttggctcaatcagcagcccttgtaatcgctgtg
gatcagtgcagcaagtccgcagcacagcacaacggtggggacatagctggctcggtggac
agtgcagtggctgtagcagagccccccagccctgtgaaagcactcccacatgtccctagc
atcgtcaaactgtccacaggggcgagttttgataccgccatgaagagaggagacgctgcc
cctgggaagctgttctctctgcgcagccagagcgaggacatctccctgccggttgagggt
aggtctgcagctccgggtggctccggggtggcggggcctgcggtccaggtccagcgccag
aaggccttctcggagcgcagctgcagcttcagtgccgagagccgtgccggcatgctgatg
gagaaacatggtgtggaccacatcgtcagccgcatgggcgccgatgcacggatcttggcg
gcggctctctctgggggcggcaccacccccccgccttcaaagccgcttcccagtgcggcc
aaagccctctttaaggacctggagttggagtctgaggaggggcggtgtccgacgctgggg
aaactatcagaggaggaagggccagcaacggacccaaccccactggaggaggggttaggg
aaagaggagaagaggatgaaaggtgaccggaaggaggcaggaggggaggatgagatgggt
ctaaagttggaggaggaagatgaggaaagagattcaggggggaggggctctatttctctg
ccaaccttggagattaaggaggtgcaggtaggggcagaccccctctccctccttgtctcg
gagcacgaggagttagcctccgtaaccagtcaggagctgccgcaatccctgcctgccatg
gtgtcccgaaacctggcagacgagattgagatgtacatgagcctccggagcccgcttggc
cccaaatcctgtagcatggagctccaccaggagggacagggaggggacccttccccggat
gctgccccagtgaagcaacctcaagaacggaggtccagcctccccgtgccccctgtcaaa
cacccaggggggtcaagcggggacacgacgcctaaacgcagccccgcagcagtcacgcgc
tccaagaccttcgccgtgaaggcctccagaagccctgcctcttccaggggtgttgtggcc
agcccaaggtcatcgccgctgactgcgctggtgaggtcgtcgcagagtggttcgctgggg
tcggtcatcaactccatctcgggcatgaagatggacaccctgctctcgggtcccaagata
gacgtgttgaaatcaggcatgaagcaggcagggaacctggccagcaaggtgtggggggct
gtggcctcagcctactcttactctgacgacgaggatgaactgggccccggctatagggaa
agggtcagtttccctgccgggctggatgagtccatgctgttggggggtggaggaagtgac
agtcccacccacagagggcccacccaaggcctggtgtccaacggcctgacccagagcagc
accagcctgggcagcagcagtgggagcagtgacacagggagaggagcccactccacacac
gtgactccaggaaggccaggcagaggtccagactctgagaggtcagaccaaggctcccac
cacaccagctcctctagtatctaccagaactgtgcccttgaggtgctgatgtccagctgc
tcccagtgtcgatcctgtgagtgtctggtatacgatgaggagatcatggcgggctggacg
gcagacgattccaacctcaacactacctgtcccttctgccgcaccgccttcctgcccctg
ctccacgtcgagttccacgacctgcgcaccaccacagctttctacctgaaccccagcgca
tcaggagacagtatccacagcaccagccagcaggccacagctacaggctccaccgagaac
aaggtaggggctgcaatggacaccccgacccctggcctcatcagcttcccagaatctgag
gacccaggagaggccccggccagccagactgccacacacaagagtttgataccggagccg
gctcaatcggatcccctgggcctgctggagcaccaggcagggaaaaggggggcgtctctg
acacgcagtaacagtgtgggcgggcctctacagagcctggttgcccagagagaaccagga
cacagcgtgtccaccaccagcctgccctgcagcctgacagagatggatggcctgggacaa
aaacggcccaacccaatgcccgtgtctgtgccctacctcagccccctggtcctccgcaaa
gaactagagaccctactggagaatgagggagaccaagtcatctacacccacaaattcctg
agccagcaccccatcatattctggaacctggtgttttatttccaacgcctggacctgccc
agctacctgcctggcctcatcctcacctcggaacactgtaacaatggagtacagctccac
cagacatccctgtctcaagacagtaaacaggtgtatgttcagctgctgtgggacaacatc
aatctgcaccaggaacctggggatcccctctaccagagctggaggaccctgatggagaag
aagggcaccctggcccccacggactaccaggagacacggaccctcctcaacagcatcgtc
cgcagcatccagaccaacgatgtctatggccccatcaacctgcttctccgggaggtcaag
aggaacccagaggtcaaacgccaaaggggtatctatcgggagatcctcttcctggcgctg
gtggcattaggacgggagaacattgacgtcgaggcgtttgaccgtgaataccgcctggcc
ttcgatgagctgagcccagagcagctcaaggccctgcataagatcgaccggccacccaac
accaacgtccagtggtgcctcaagtgcttcggcgctccagtcatctga
DBGET
integrated database retrieval system
