Oncorhynchus kisutch (coho salmon): 109906587
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Entry
109906587 CDS
T09179
Name
(RefSeq) splicing factor 1-like
KO
K13095
splicing factor 1
Organism
oki
Oncorhynchus kisutch (coho salmon)
Pathway
oki03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
109906587
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
oki03041
]
109906587
Spliceosome [BR:
oki03041
]
Complex A
Other components
Complex A specific factors
109906587
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SF1-HH
KH-I_KHDC4-BBP
KH_1
zf-CCHC
KH_12
zf-CCHC_3
Motif
Other DBs
NCBI-GeneID:
109906587
NCBI-ProteinID:
XP_020359939
Ensembl:
ENSOKIG00005029844
UniProt:
A0A8C7IIJ4
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Position
LG16:complement(28790458..28805353)
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AA seq
681 aa
AA seq
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MATGANATPLGKLHPSIGAKRGFEAGPGAGLMPTPGPPVSFPSLPNFQPPIPNISFPQAH
PVFTAVAAFPTPPQPPQGAGIPSQSDFGQKKARKRSRWSSETPDQKTVIPGMPTVIPPGL
TRDQERAYIVQLQIEDLTRKLRTGDLGIPVNPEDRSPSPEPIYNSEGKRLNTREYRTRKK
IEEERHSLITDMVALNPEFKPPADYKPPATRVNDKVMIPQDEYPEINFVGLLIGPRGNTL
KNIEKECCAKIMIRGKGSVKEGKVGRKDGQMLPGEDEPLHALVTANTMENVKKAVEQIRT
ILKQGIETPEDQNDLRKMQLRELARLNGTLREDDNRILRPWQSTEPRSVTNTTLCTKCGG
AGHISSDCKFTSSFAAPRAGEPPQSAQDKARMDKEYLSLMAELGEAPVPSSGGGHCNNQN
SGHNRGNNNNQPPPSRPPWMNSGQSENRNFNSMHGGHGGHGNQHGGHGNHGGHGGHHNFP
PPMSNMGGHNMPPNNGMPPPWMQPPPPPMGQGHGHHMGLLPPPMGMMPPPPPPPNNQPPP
PPSGPLPPWQQQAPPPPPASSMATSAPLPWQQNTTTTSSPGSGNLPPWQQPQQSAASAAQ
PPPPMGNPSMVPPPPGVQPPLPPGAPPPPPPPPPGSAGMMYAPPPPPPMDPSNFVTMMGM
GVTGMPPFGMPPAPPPPPPQN
NT seq
2046 nt
NT seq
+upstream
nt +downstream
nt
atggctacgggagcaaatgcaacccctctggggaagctgcacccgagtattggcgctaaa
cgaggctttgaagccgggcccggtgcggggttaatgcctacaccggggccgcctgtttcc
tttccttcgctcccgaattttcagcccccaattccaaacatctctttcccgcaagctcac
ccagtatttactgcggtggccgcttttcccaccccgccacaaccaccccaaggagcagga
attccgtctcagtcagacttcggtcagaaaaaagccaggaaaagaagccgctggagtagc
gagacacccgaccagaagacagtcattcctggcatgcccaccgtcatcccgcctggactg
actcgggatcaggagagggcctatatagtccaactgcagatcgaagacctgactcgtaaa
ctgcgtacaggagacctgggaatccctgttaaccctgaggacaggtccccgtctccagag
cccatctacaacagcgaggggaagaggctgaataccagggagtaccgcacacgcaagaag
atcgaggaggagcgtcactccctcatcaccgatatggtggcactcaaccctgagttcaag
ccccccgctgactacaagcccccagctactagggtcaacgacaaggtgatgatcccacag
gacgagtaccccgagattaactttgttgggttgctcattgggccacgtggcaacaccctg
aagaacatagagaaggagtgctgtgccaagatcatgatccgtggcaagggctctgtgaag
gagggcaaggtgggccgtaaggacggtcagatgctgccaggggaggacgagccgctgcac
gccctggtcaccgccaacaccatggagaacgtcaagaaggcggtggaacagatccgtacc
atcctgaagcagggcatcgagacccccgaggaccagaacgacctgaggaagatgcagctg
agggagctggccagactcaacggcaccctgagagaggacgacaaccggatccttcgtccg
tggcagagcactgaaccccgcagtgtcaccaacaccaccctctgtaccaagtgcggtggc
gcaggccatatctcctctgactgcaagttcaccagctcctttgcggcgcccagggccggt
gagcctccccagtctgcccaggacaaggcccgtatggacaaggagtatctgtccctcatg
gctgagctaggcgaggcccctgtaccttcctctggcgggggacactgcaacaaccagaac
agtggccacaaccgaggcaacaacaataaccagccaccaccgagccgtcctccctggatg
aactctggccagtctgagaacaggaacttcaacagcatgcacggaggccacggcggtcat
ggcaaccaacacgggggtcatggcaaccacggaggtcacggaggccaccacaacttccca
ccccccatgtccaacatgggagggcacaacatgccccccaacaatggaatgccacccccg
tggatgcagcccccaccgccccccatgggccagggacacggccaccatatgggtctgctg
ccaccacccatgggtatgatgccaccaccacctccgccccccaacaaccagcctcccccg
ccaccctcaggtcccctgccaccatggcaacagcaggcccccccaccccctcctgccagc
agcatggccactagtgcaccactgccatggcaacagaataccaccacgacatccagtcct
ggctctggcaacctgcccccctggcagcagccccaacagtccgctgcctcggccgcccag
ccccctccccccatgggcaacccctccatggtcccccctccgccaggggtgcagccccct
ctcccccccggcgccccacctccccctcctcccccaccccccggctcggccggcatgatg
tacgcccctcctccccctccgcccatggacccctccaactttgtcaccatgatggggatg
ggggtgacgggcatgcccccctttggtatgccccccgcaccaccacctccaccccctcag
aattaa
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