KEGG   Oncorhynchus kisutch (coho salmon): 109906587
Entry
109906587         CDS       T09179                                 
Name
(RefSeq) splicing factor 1-like
  KO
K13095  splicing factor 1
Organism
oki  Oncorhynchus kisutch (coho salmon)
Pathway
oki03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:oki00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    109906587
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:oki03041]
    109906587
Spliceosome [BR:oki03041]
 Complex A
  Other components
   Complex A specific factors
    109906587
SSDB
Motif
Pfam: SF1-HH KH-I_KHDC4-BBP KH_1 zf-CCHC KH_12 zf-CCHC_3
Other DBs
NCBI-GeneID: 109906587
NCBI-ProteinID: XP_020359939
Ensembl: ENSOKIG00005029844
UniProt: A0A8C7IIJ4
LinkDB
Position
LG16:complement(28790458..28805353)
AA seq 681 aa
MATGANATPLGKLHPSIGAKRGFEAGPGAGLMPTPGPPVSFPSLPNFQPPIPNISFPQAH
PVFTAVAAFPTPPQPPQGAGIPSQSDFGQKKARKRSRWSSETPDQKTVIPGMPTVIPPGL
TRDQERAYIVQLQIEDLTRKLRTGDLGIPVNPEDRSPSPEPIYNSEGKRLNTREYRTRKK
IEEERHSLITDMVALNPEFKPPADYKPPATRVNDKVMIPQDEYPEINFVGLLIGPRGNTL
KNIEKECCAKIMIRGKGSVKEGKVGRKDGQMLPGEDEPLHALVTANTMENVKKAVEQIRT
ILKQGIETPEDQNDLRKMQLRELARLNGTLREDDNRILRPWQSTEPRSVTNTTLCTKCGG
AGHISSDCKFTSSFAAPRAGEPPQSAQDKARMDKEYLSLMAELGEAPVPSSGGGHCNNQN
SGHNRGNNNNQPPPSRPPWMNSGQSENRNFNSMHGGHGGHGNQHGGHGNHGGHGGHHNFP
PPMSNMGGHNMPPNNGMPPPWMQPPPPPMGQGHGHHMGLLPPPMGMMPPPPPPPNNQPPP
PPSGPLPPWQQQAPPPPPASSMATSAPLPWQQNTTTTSSPGSGNLPPWQQPQQSAASAAQ
PPPPMGNPSMVPPPPGVQPPLPPGAPPPPPPPPPGSAGMMYAPPPPPPMDPSNFVTMMGM
GVTGMPPFGMPPAPPPPPPQN
NT seq 2046 nt   +upstreamnt  +downstreamnt
atggctacgggagcaaatgcaacccctctggggaagctgcacccgagtattggcgctaaa
cgaggctttgaagccgggcccggtgcggggttaatgcctacaccggggccgcctgtttcc
tttccttcgctcccgaattttcagcccccaattccaaacatctctttcccgcaagctcac
ccagtatttactgcggtggccgcttttcccaccccgccacaaccaccccaaggagcagga
attccgtctcagtcagacttcggtcagaaaaaagccaggaaaagaagccgctggagtagc
gagacacccgaccagaagacagtcattcctggcatgcccaccgtcatcccgcctggactg
actcgggatcaggagagggcctatatagtccaactgcagatcgaagacctgactcgtaaa
ctgcgtacaggagacctgggaatccctgttaaccctgaggacaggtccccgtctccagag
cccatctacaacagcgaggggaagaggctgaataccagggagtaccgcacacgcaagaag
atcgaggaggagcgtcactccctcatcaccgatatggtggcactcaaccctgagttcaag
ccccccgctgactacaagcccccagctactagggtcaacgacaaggtgatgatcccacag
gacgagtaccccgagattaactttgttgggttgctcattgggccacgtggcaacaccctg
aagaacatagagaaggagtgctgtgccaagatcatgatccgtggcaagggctctgtgaag
gagggcaaggtgggccgtaaggacggtcagatgctgccaggggaggacgagccgctgcac
gccctggtcaccgccaacaccatggagaacgtcaagaaggcggtggaacagatccgtacc
atcctgaagcagggcatcgagacccccgaggaccagaacgacctgaggaagatgcagctg
agggagctggccagactcaacggcaccctgagagaggacgacaaccggatccttcgtccg
tggcagagcactgaaccccgcagtgtcaccaacaccaccctctgtaccaagtgcggtggc
gcaggccatatctcctctgactgcaagttcaccagctcctttgcggcgcccagggccggt
gagcctccccagtctgcccaggacaaggcccgtatggacaaggagtatctgtccctcatg
gctgagctaggcgaggcccctgtaccttcctctggcgggggacactgcaacaaccagaac
agtggccacaaccgaggcaacaacaataaccagccaccaccgagccgtcctccctggatg
aactctggccagtctgagaacaggaacttcaacagcatgcacggaggccacggcggtcat
ggcaaccaacacgggggtcatggcaaccacggaggtcacggaggccaccacaacttccca
ccccccatgtccaacatgggagggcacaacatgccccccaacaatggaatgccacccccg
tggatgcagcccccaccgccccccatgggccagggacacggccaccatatgggtctgctg
ccaccacccatgggtatgatgccaccaccacctccgccccccaacaaccagcctcccccg
ccaccctcaggtcccctgccaccatggcaacagcaggcccccccaccccctcctgccagc
agcatggccactagtgcaccactgccatggcaacagaataccaccacgacatccagtcct
ggctctggcaacctgcccccctggcagcagccccaacagtccgctgcctcggccgcccag
ccccctccccccatgggcaacccctccatggtcccccctccgccaggggtgcagccccct
ctcccccccggcgccccacctccccctcctcccccaccccccggctcggccggcatgatg
tacgcccctcctccccctccgcccatggacccctccaactttgtcaccatgatggggatg
ggggtgacgggcatgcccccctttggtatgccccccgcaccaccacctccaccccctcag
aattaa

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