Oncorhynchus kisutch (coho salmon): 109906613
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Entry
109906613 CDS
T09179
Name
(RefSeq) VPS10 domain-containing receptor SorCS2 isoform X1
KO
K27082
VPS10 domain-containing receptor SorCS2
Organism
oki
Oncorhynchus kisutch (coho salmon)
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oki04131
]
109906613
Membrane trafficking [BR:
oki04131
]
Protein recycling
Others
Others
109906613
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sortilin-Vps10
Sortilin_C
PKD
PKD_4
BNR_6
DUF6786
InlK_D3
BiPBP_C
DUF2769
Motif
Other DBs
NCBI-GeneID:
109906613
NCBI-ProteinID:
XP_031648076
Ensembl:
ENSOKIG00005043962
LinkDB
All DBs
Position
LG16:complement(30207811..30535493)
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AA seq
1171 aa
AA seq
DB search
MSAIGLMARSMVSLRPKGIVSAHLCLAVVIAWMSLMRPVLCDSGVLHRSDGDRLLDSRGA
VGIDGVNGVFGPGLGDNDGDAGDVESPRFRRALSQEKVSLLSSSFVLKGDATHNQAMVHW
TGENSSVILILTKYYHGDSSKVLESSLWRSSDYGTTYSKLNLMPGTTIVVSNFYICPINK
KKVILVSSSINERDQMLFISTDEGSSFQRQPLSFTAETLLFHPKEEDKVLAYCKEGKLYV
STDLGRKWTLMQERVTKDRIYWSVAGVDVDPDLVHMEMQDTSGGYLYVTCLIQNCSDKMV
TAQFLGKIDHNSLSVQDDYIFVKVTTGNRTKHYVSYRRNEFVQMRFPKYALPKDVHIVST
DESQVFLALQEWYQTDTYNLYQSDPQGVYYSVVLENVRSAKQPEESALIDILEVRGVKGV
FLANQKVDGKVTTLITYNKGRDWEPLAPPTTDMNGKTVTCQSPDCHLHLHLRWADNPYVS
GTVHTKDSAPGLIMGAGNLGSQLVEYKEEMYITSDCGKTWRQVFEEEHHILYLDHGGVIV
AIKDTSIPLKILKFSIDEGRTWIIHNFTSTSVFVDGLLSEPGDETLVMTVFGHISYRSDW
ELVKVDFRQSFPRQCTEADYDSWKLTDLKGEKCIMGQERSFRKRKDTAFCIKGKSYTSAL
TTKTCQCSEKDFNCDYGFERAQSLKTEGDRCFADFWHDPDSPPDDCHLGHDFESSTGYRK
VVSNMCEGGVNKQQSAKQHTCPLLPPRGLQLGIKGQILAVAPGDDITFIVHQEQGDTSNT
KYQVDLGDGVRAIYQNLTVTDEPIQHRYEQLGVYRVTVKAENMAGHDQATMYIQVTAPLQ
EVHLEVVPIAGVNQEVNLTAVVLPSEANLTVFYWWIGDNLQPKLSLENSLITRFPAEGEV
SVTVQASNGRSMVQDTKTVRIYDLFQVIPLAFSSNLDLLNPNIPEWREDVGQVVTRILAK
ITGVPQESLVTMVKPGLPTTAELYILPPESKPAKRSVFVDKRIPAIKQAFSENNVSFIVR
GGLQVLVTLADPNAGLVANDSSPRATEIGSQGGVAGPGVWALAVIFLISVIATGSFILYK
FKSPWLRTEDAYPPLFFRKLPGRNVYAQMHNEKEQEMTSPVNHSEDTQHIIQGEEFIDDD
LDSQTLGNAGGNHSGVVLSINSRELHSYLTS
NT seq
3516 nt
NT seq
+upstream
nt +downstream
nt
atgagcgctataggcctaatggcgcgaagcatggtatctctgcgtccgaaaggaatcgtt
tcagcgcacctgtgcttggccgtggttatcgcctggatgtcattgatgagacccgtgcta
tgtgacagcggcgttttacaccggagcgacggggatcgtctgcttgacagccgcggcgct
gtaggcatagacggggttaacggagtgttcggaccgggcttgggtgataatgatggggac
gccggcgacgtggaatctccgcgcttcaggagagcactatcccaagagaaagtgtccctg
ctcagcagctcgttcgtgctcaaaggggatgctactcacaaccaggcgatggtgcactgg
actggagagaacagcagcgtcatcctcatcctgaccaagtactaccacggtgactccagc
aaggttctggagagctccctctggaggtctagtgactatggcaccacctacagcaagcta
aacctgatgcctgggacaactatcgtggtctctaacttctatatctgccccatcaacaag
aaaaaggtgatcctagtgagctcgtccattaacgagcgtgaccagatgctgttcattagt
acagacgagggctcctcgttccagcgacagcccctctccttcaccgcggagaccctcctc
ttccaccccaaggaggaggacaaggtgctggcttactgcaaggagggaaagctgtatgtg
tccacggatttgggccggaagtggactctaatgcaggaacgagtgaccaaggacaggata
tattggtctgtggctggtgtagatgtggaccctgacttggtgcatatggagatgcaggac
acaagtggagggtacctgtacgtgacctgtctgatccagaactgctcagacaagatggtg
acggctcagttcttggggaagatcgaccacaactctctctcagtccaagacgactacatc
tttgtcaaggtgaccacaggaaaccgcaccaagcactacgtttcataccgacggaatgag
tttgtccagatgaggttccctaaatacgccctaccaaaggacgtccacatagtgagtacg
gatgagagccaggtgttcctggccctgcaggagtggtaccagacagacacctacaacctg
taccagtcggacccgcagggcgtctactactccgtcgtgctggagaacgtccgcagcgcc
aagcagccggaggagagcgcccttatagacatactggaggtccgcggggtcaaaggcgtc
ttcttggccaatcagaaggtggatggcaaagtgacgactctcatcacctataacaaaggc
cgagactgggaaccccttgccccgcctaccactgacatgaacggcaagacagtcacctgc
caatcacctgactgtcacctccacctccacctgcgctgggctgacaacccttacgtatca
gggaccgtccacaccaaagactccgcccccggactcatcatgggtgcaggtaacctgggt
tcccagctggtggagtataaagaagagatgtacatcacctctgactgtgggaagacttgg
agacaggtgtttgaggaagagcatcacatcctgtacctggaccatggaggggtcattgtt
gccatcaaagacacctccatccccctcaaaatactcaagttcagtatcgatgagggaagg
acgtggatcatccacaacttcaccagcacctcggttttcgtcgatggacttctgagcgaa
ccgggagatgagaccttggtcatgacggtgtttggtcacatcagttaccggtcagactgg
gagcttgtcaaggtggacttcagacagtcattccccagacagtgtactgaggccgactac
gactcctggaaactcactgacctgaagggagagaagtgcatcatgggtcaggagaggagt
tttaggaagaggaaggacaccgcattctgcatcaaggggaagagctacacctccgccctc
actaccaagacctgccagtgctccgagaaagacttcaactgtgactatgggtttgagcgt
gcccagagcctgaagaccgagggagatagatgctttgctgacttctggcatgacccagac
tcgccacctgacgactgccatctgggacatgacttcgagtccagcacggggtacaggaag
gttgtgtccaacatgtgtgaggggggagtgaacaagcagcagagcgccaagcagcacacc
tgtcctctgctgcctcccagaggcctccagctgggtataaaggggcagatactggctgtg
gcgcctggtgatgacatcaccttcattgtccaccaggaacagggtgacaccagcaacact
aaataccaggtggacctgggtgacggggtgagggccatctaccagaacctgacagtgaca
gacgagcccatccagcaccgctacgaacagctgggggtctaccgtgtcactgtcaaggcc
gagaacatggccggacacgaccaggccaccatgtacatccaggtcacagcccctctacag
gaagttcacctggaagtagttcccattgccggggttaaccaggaagtcaacctgacagct
gtggtgcttccttcagaggccaacctgactgtcttctactggtggataggagacaaccta
cagcccaagctgtccctggagaatagtctgataacgcggttccctgcggaaggagaggtg
tctgtcactgtccaggcctctaatggacgctccatggtgcaggacaccaagacagtccgc
atctacgaccttttccaggtcatccctctggccttcagcagtaacctggacctcctcaac
cccaacattccagagtggagggaggacgtgggtcaggtggtcaccaggattctggccaag
atcacaggtgtcccccaggagtccctggtaaccatggtgaagccgggcctgcccaccaca
gccgagctgtacattctcccaccagagagcaagcctgctaagaggagtgtatttgtggat
aagcgtatccctgccattaagcaggccttcagtgagaacaacgttagcttcatcgtacga
ggaggtctacaggtgttggtgaccttagctgatcctaacgcaggactagtagctaatgac
tcgtccccgagagcgacggagatcggttctcagggtggagtggcaggtccaggtgtctgg
gctctggctgtcatcttcctcatcagcgtcatcgctactggatccttcatcctctacaag
ttcaagagtccttggcttaggactgaggatgcctatcctccactatttttcagaaagctg
cctggccgaaatgtgtatgcccagatgcacaacgagaaggagcaggagatgaccagccct
gtcaatcacagcgaggacacgcagcacatcatccagggggaggagtttatcgacgacgat
ctggactcgcagactctaggtaacgcaggaggtaaccattcgggtgtggtgctgagcatc
aactccagagagctgcacagctacctgaccagctga
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