Oncorhynchus kisutch (coho salmon): 109906675
Help
Entry
109906675 CDS
T09179
Name
(RefSeq) trafficking protein particle complex subunit 10
KO
K20307
trafficking protein particle complex subunit 10
Organism
oki
Oncorhynchus kisutch (coho salmon)
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oki04131
]
109906675
Membrane trafficking [BR:
oki04131
]
Endosome - Golgi transport
Tethering complex
TRAPP complex II
109906675
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRAPPC10_1st
TRAPPC10
Ig_TRAPPC10
Foie-gras_1
SNAP
TPR_7
Motif
Other DBs
NCBI-GeneID:
109906675
NCBI-ProteinID:
XP_020360093
Ensembl:
ENSOKIG00005032949
LinkDB
All DBs
Position
LG16:37919475..37936970
Genome browser
AA seq
1274 aa
AA seq
DB search
METHEETPIIYTMENKPIVTCAGDQSLFTSLYTSLAQQLPKEPMEWRRSYGRAPKMIHLE
ANFVQFKEELLPKDGNRALLTFPFLHIYWTDCCDTEMYKVSVKDGMLRWQSTLRLHGSVD
WLIVVVESEAKKKNKTNILPRTSIVDKIRNDFCNKQSDRCVVLSDPLKESSRSQDSWNSF
LTKLRTLLLMSFTKNLGRFEDDMRTLREKRTEPGWSFCDYFMVQEELAFVFEMLQQFEDA
LVQYDELDALFTQYVLNFGAGDGANWLGSFCATVKRWSGLLLRRPIDMEKRELIQRGEAS
LLDLRSYLFSRQCTLLIFLQRPWEVTQRALELLHNCVQELRLLEVSVVQGALDCWVFLSC
LEVLHRIEGCCDRAQLEANCSHTVGLWTYATEKLKSLGYLCGLVAEKGPTSEDLNRTVDL
LAGLGEERPETVNSLQSPYKKLNEALSSVEAFEKHYLELSHAAMEMYRAIGRMRSSRLIG
KSLAEFYMKKGDPERAEGFLDDSLRSYVAEGWSLQVTHTRKQMAECQKLLQQTEDYLQTS
ALLAGDANLTEEERKHFYQVILTFASQAPAPTDQTVALSMAAFAQLRQMQFSPPGAVVHV
GAALQLELRVRCLMPVAVQVEQLAATLHFSLEQGGARGRAGGTQRRTGQGPQGQGDGVVL
FPQGSPLAGAGMGASLPPALELYEMQDRSPSDSSLNSTGVVCKNMHLLLRRHDSSASLDT
PTAGALPAAVAVDDGAQMLRARDITLQPGDNSILFTAPTGEPGSYTLRQLCGSVGRVQFV
QSHIYPVVQYEVYSQEPQLTIEPLSDNLLAGIPQKVKFTIATGHYSVKKGDALQLSNTDS
MPILHSSCCSATILSSTGELVGERALSVQSSEKVTSISLPPTPPYHTLEFQLEVLCHIPP
TPFKPDIERLTNGEVRHRPKNHSQADSGMIHIDQKVSIDCPWSIYSTLISLTFYVPFKAK
HSILSAGKRKYIQVCLQNVSDTNFHLADPVLTERQPTIPVELLSFNAKTQQTVCSQQSVF
CLWEMRWVKHLPLCLQCAFSASFAPVSASDAHTAFKPYRYEFQLDRVSTLYSLKAEILPS
SGDQHCRTGALCGLEVSITRQAEPSETEGEEEESTEIEGLRTTKLMYEVVDNSSNWAVCG
KSSGVVSMPVAASATHRVQMEVMPLFAGHLPFPDIKVFKYLPHSAVPAIQPDTDSCLEND
TMSLLDKGLDDQGDTASIRSRGSIHSVGSGEQQRGLPMPRLEPFSPGQVFYWSQGRQVLV
LPVTDDHVMEVNVT
NT seq
3825 nt
NT seq
+upstream
nt +downstream
nt
atggagacccatgaagaaacgccaataatctacacaatggaaaacaagccgattgtgaca
tgtgctggcgaccagagcctgttcacttccctctacacctctctggcacagcagttaccc
aaggagcccatggagtggaggaggtcctacggacgcgcaccaaagatgattcacctcgag
gccaactttgttcagttcaaagaggagctgcttcctaaggatggaaatagagccttgctc
accttccccttcctgcacatatactggacagactgttgtgacacagagatgtacaaggtg
tcggtgaaggatggcatgctgcggtggcagagcaccctgcggctgcacggctcggtggac
tggctcatcgtggtggtggagagcgaagccaagaagaagaacaagaccaacatcctgccg
cgcacctccatcgtagacaagatccgcaacgacttctgcaacaagcagagcgacaggtgt
gtggttctgtctgaccctctgaaggagtcgtctcggtcccaggattcgtggaactccttc
ctgaccaagctgcgcaccttgctgctcatgtccttcaccaagaacctgggtcgcttcgag
gatgacatgcgcacgctccgcgagaaacgcaccgagcccggctggagcttctgtgactac
ttcatggtgcaggaggagttggcctttgtgtttgagatgctgcagcagtttgaggatgct
ctggtccagtatgacgagctggacgctctcttcactcagtatgtcctcaattttggggct
ggagacggggccaactggctgggctcgttctgtgccacggtgaagcgctggagcgggctg
ctcctgcggcggcccatcgacatggagaagcgcgagctgatccagcgcggtgaggccagc
ctgctggacctgcgcagctacctcttctcccgccagtgcaccctgctcatcttcctccag
aggccctgggaggtcacccaacgagccctggagctgctgcacaattgtgtccaggagctg
cgcctgctcgaggtgtctgtggtccagggggcgttggactgctgggtgttcctcagctgt
ctggaagtgctgcataggatcgagggctgctgcgaccgcgcccagctagaggccaactgt
tcccacactgtcggcctgtggacctacgccacagagaagctaaagtctctgggctacctg
tgtggcctggtggctgagaagggccccacctccgaggacctaaaccgcaccgtagacctt
ctggctggcctgggggaagagagaccagagacggtcaacagcctgcagagcccttacaaa
aaactcaatgaggccttatcgtctgtggaggcatttgaaaaacactatctggagctgtct
catgctgcaatggagatgtacagagccataggcaggatgcgctcatcccggctcattgga
aagagtctagctgagttttacatgaagaaaggtgacccggagagagcagagggcttcctt
gatgactctctgaggtcctacgtggcagaggggtggagcctgcaggtgactcataccagg
aagcagatggccgagtgtcagaagctcttgcagcagactgaggactacctgcagaccagt
gccttgctggcgggcgacgccaacctgacagaggaggagaggaagcacttctaccaggtg
atccttaccttcgccagccaggccccggcacccacagaccagactgtggctctgagcatg
gcggcattcgcccagctgcgccagatgcagttcagcccgcctggcgccgtggtgcacgtg
ggtgccgccctgcagctggagctgcgcgtgcgctgcctgatgcctgtggccgtgcaggtg
gagcagctggctgccactctccacttcagcctggagcagggcggggcgaggggccgggcg
ggcggcacccagaggaggacaggccagggaccacaaggccagggggacggggtggtcctg
ttcccccagggaagccccctagctggggccgggatgggcgcttcactaccccccgcactg
gagctttatgaaatgcaggaccgcagcccgtcggacagctcgctcaactccacgggggtg
gtgtgtaagaacatgcacctgctgctgcggcgccacgacagctcagcctccctagacacg
cccaccgccggggccctcccggcagcggtggccgtggacgacggggcccagatgctgagg
gcacgcgacataacgctacagcccggcgacaacagcatcttgttcacggcccctactgga
gagccgggctcgtacacgttacgtcagctgtgcgggagtgtggggagagtccagtttgtc
cagtctcacatctaccctgtggtgcagtacgaggtctactcccaggagccacagctcacc
atcgagcccctctcagacaacctgttggcaggcattccccagaaggtgaagttcaccata
gcaacaggccactacagtgtgaagaagggtgacgcgctgcagcttagcaatacagactcc
atgcccatcctccactctagctgctgctctgctaccatcctgtccagcacgggagagctc
gtgggggagcgtgctctttctgttcagtcatcggagaaggtgaccagcatttccctgccc
ccaacccctccctaccacaccctggagttccagctggaggtgctgtgccacatccccccc
acgcccttcaagcccgacatcgagcgtctcaccaatggcgaggttcgccaccggcccaag
aaccacagtcaggcagacagtggcatgatccatatcgaccagaaggtctccatcgactgt
ccttggtccatctactccacgctcatatccctcaccttctatgttcctttcaaagccaag
cactcaatactctctgctgggaaaaggaagtatatacaggtgtgtctccagaacgtgtcc
gacacaaacttccacctggcggacccggtcctcacagagcgccagcccacaatcccggtg
gagctgctctcattcaatgctaaaacacaacagacggtgtgcagtcagcagtcagtgttc
tgcctgtgggagatgcgttgggtcaaacacctcccgctgtgcctgcagtgtgcattctcc
gccagcttcgcgcccgtctccgcctctgacgcacacacagccttcaaaccctaccgctac
gagttccagctggaccgggtctctaccctttacagcttgaaggccgagatcttgccgtcg
tctggagaccagcactgtcgcaccggcgccctctgtggcctcgaggtatccatcacacgg
caggcagagcccagcgagactgaaggggaggaggaggagtctacagaaatagagggcctg
aggaccaccaagctcatgtatgaagtggtggacaacagcagtaactgggcggtgtgtggc
aagagctcgggggtggtgtccatgcccgtggctgccagcgccacacacagggttcagatg
gaggtcatgcccctgttcgctgggcacctgcccttccccgacatcaaagtgttcaagtac
ctgccccacagtgccgtcccagccattcagccggacacagacagctgcttagagaacgac
accatgtccctgctggacaaaggtctggacgaccagggcgacacggccagcatccgtagc
cggggcagcatccactcggtgggcagtggggagcagcagaggggtctgcccatgccccgg
ctggagcccttcagtccaggacaggtgttctattggagccaggggcggcaggtgctggtg
ctgcctgttactgacgaccacgtgatggaggttaatgtcacatga
DBGET
integrated database retrieval system
