Oncorhynchus kisutch (coho salmon): 109906702
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Entry
109906702 CDS
T09179
Name
(RefSeq) LOW QUALITY PROTEIN: CLIP-associating protein 1-like
KO
K16578
CLIP-associating protein 1/2
Organism
oki
Oncorhynchus kisutch (coho salmon)
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
oki03036
]
109906702
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
oki04812
]
109906702
Chromosome and associated proteins [BR:
oki03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Microtubule-associated proteins
109906702
Cytoskeleton proteins [BR:
oki04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Cytoplasmic linker proteins (CLIPs)
CLIP-associating proteins
109906702
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CLASP_N
CEP104-like_TOG
XMAP215_CLASP_TOG
HEAT_EF3_N
HEAT
Sec7-like_HUS
TOR1L1_N
Cnd1
Adaptin_N
HEAT_DAAF5
ParcG
MMS19_C
Paxt-1_C
MMS19_N
KH_DEAH11_1st
ZapG-like
Motif
Other DBs
NCBI-GeneID:
109906702
NCBI-ProteinID:
XP_031648242
Ensembl:
ENSOKIG00005050943
LinkDB
All DBs
Position
LG16:complement(40742465..40781893)
Genome browser
AA seq
1579 aa
AA seq
DB search
MEWNMEYCMEQVMQKDLGRRLQVGQDIIDSILDKDKSQVLEQDQTMLDRMVDGVATNWVN
SSNFKVALLGMDILSALVTRLQERFRTQIGTVLPSLIDRLGDSKDQVRDQDQALLLKIMD
QAANPQYVWDRMLGGFKHKNNRTRESVCICLIATLNVYGAQGLTLSKIVPHICHLLGDPT
SQVRDGAMNCLVEIYRHVGERVRMDLGKKGLPQSRLNVIFSKFDEVQRSGNMILSPVSDK
NFEDDDSVDGGRSSSSKGPSSGKKTVSMGSFRRPSSASSTKSTGRDGPSAAAAGAVDEED
FIRAFEEVPTMQIFSNREMEDAMTKIREVLADDKRDWEHRVTALKKMRSLLLAGAVEFDG
FSQQLRLTEAAFKMSSKDLRSQVVREACITLGHLSYILGNRFDHCAESIMPTLLTLVSNS
AKVMATSGIAVIRLIIRHTHYPRLIPIVTGSCQSKSVAVRRRSFEFLDLLLQEWQTSSLE
RNVAVLTETIKKGVHDADSEARSVARKCYWTFHGHFSREAEQLFQALESSYQKALQSHMK
SSDSILSLPASDRSSSSSQESLNRPQSAKSSMGNTVTRTKAAPSRGPSTPGSLQRSRSDV
DVNAAATACAKTRMTPVPSSPAPFSAASALPPGSYASLDNTPGNIRPEGRVRTRRTSSGS
GVGASPSVTDSRGRSRAKMVSVSQPGSRSGSPGRLLSHTYGRIPRATGVTTPSDRRPKVP
RSHGCSRDTSPDRSGLARSRIPRPSMSQGCSRDTSRESSRDTSPARGFSPLASRRVSRST
SALHSAESVGHSERLGLAHQARISASVNAMRILNTGTEVEAAVADALLLGDARNNKRRPV
RRRYESPGIYSDDDANSDASSACSERSYGSRNGGQSHYMRQTEDVAEVLNHCASSNWSER
KEGLLGLQNLLVSQRILSRVELKRLCEIFTRMFADPHSKRVFSMFLETLVDFITLHREDL
QDWLFVLLTQLLKKMGADLLGSVQAKVQKALDVTRDSFPFDQQFNILMRFIVDQTQTPNL
KVKVAILRYIECLARQMDPADFINSSETRLAVSRIITWTTEPKSSDVRKAAQVVLIALFE
LNTPEFTMLLGALPKTFQDGATKLLHSHLRNSSNTGVASPSSTMGRTPPPPRHPSSRSSP
LTSPTNCSRGGALSPSRLWGWSADGLSKYPPPFPTPLSSTPAAPSLKTLRSAYSPSMLEY
DTENLNTDQIYSSLRGVTEAIQNFSFRSQEDLMEPGRGKREDMPGVGTASHSGADVVEGP
GGRTALDNKTSLLNTPSPRSFSGPRGRDYNPYNYTDTISAYDKAALKETVYEDNVEQLRD
GRQECGGENKMLHTKNSSPSEQLELAGELLKELSNPSERPEERRGALVELLKIAREDSLA
VWEEHFKTMLLLLLETLSDQDHTIRALALRVLKEILRNQPARFKNYAELTIMKTLEAHKD
SHKEVVRAAEESASTLAGSIHPEQCIKVLCPIVQTADYPINLASIKMQTKVIERITKESL
HQLLPDIIPGLLQGYDNTESSVRKASVFCLVAVYSVIGEELKPYLAQLTGSKMKLLNLYI
KRAQTSTSNSSSSSDISSY
NT seq
4740 nt
NT seq
+upstream
nt +downstream
nt
atggagtggaatatggagtactgtatggaacaggttatgcagaaggacctgggtaggaga
ctacaggtgggccaggacatcatagactccatcctggacaaggacaagtcccaggtcctg
gagcaggaccagaccatgctggacagaatggtggatggtgtcgctaccaactgggtcaac
tccagcaatttcaaggtggctttgttgggaatggacatactctcagctttagtaacaaga
ctacaggaacggtttaggacacagattggaactgttttgccaagtttgatagatcgacta
ggcgactcaaaagaccaagtcagagaccaggaccaagctcttctactaaagatcatggac
caagctgctaacccacagtatgtatgggaccgaatgttaggaggattcaaacacaagaac
aacaggacccgggagagtgtctgcatttgccttatcgccacgttaaatgtatatggagct
caaggcttgaccctcagcaaaattgtcccccacatatgtcatcttttaggagaccctaca
agccaggtgcgagacggggccatgaactgtcttgttgaaatctaccgacacgtcggggag
cgggtgcggatggacctggggaaaaagggactgccacagtcacggttgaatgtcattttc
agtaaatttgatgaagttcaacgatcggggaacatgatcctgtcccctgtctcagataag
aactttgaagatgatgattcggtggacggggggcggtcctcctcttctaagggcccgtcg
tcagggaagaagacagtgagcatggggtcattccgtaggcccagctctgcttccagcacc
aaatcaacagggagagatggtcctagtgcggctgctgcaggggctgtggatgaggaggac
ttcatccgtgccttcgaggaagtgcccactatgcaaattttctctaacagggaaatggag
gacgccatgaccaagatcagagaggtgctggctgacgacaaacgagactgggagcacaga
gtcactgcgttgaaaaagatgcgttctctgctcctggcgggagcagtggagtttgacggt
ttctcccagcagctgcgtctcacggaggcagccttcaagatgtcctctaaagacctgcgc
tctcaggtggtcagagaggcctgtatcactctgggccacctgtcctacatcctggggaac
aggtttgatcattgtgctgagtccatcatgcccactctcctaaccctggtctctaactcg
gccaaggtcatggccacatccggaatcgctgtcatacgactcatcatcagacatacacac
taccctcgtctcattcctatcgtgaccggcagctgccagtccaaatctgtggccgtgaga
aggcgcagttttgagttcttggacctcttgctgcaggagtggcagaccagctctctagag
aggaatgtagctgttctgacagagaccatcaagaaaggagtccatgatgcagactccgag
gccagatcagtggccaggaagtgctactggacgttccacggccacttcagccgggaggcg
gagcagctgttccaggctctagagtcgtcctatcagaaggctctccagtcccacatgaag
agttctgacagcatcctgtccctccctgcctcagaccgctcctcctcctcctcacaggag
agcctcaaccgccctcagtctgccaagagctccatgggaaacaccgtgaccaggacgaaa
gcggctccctccagaggtccctccaccccgggctctctacagcgttcccgtagcgacgtg
gacgtgaacgctgccgccaccgcttgtgccaagaccaggatgactcccgtgccctcctcg
ccggcccccttcagcgctgcctccgctctgccacccggctcctacgcctctcttgacaac
acacctggtaacattagaccagagggccgtgtgcgtaccaggagaacgagttcggggagc
ggcgtgggggcgagtccctctgtcacagacagtagggggagaagtcgagccaaaatggtt
tcagtgtctcaacctggcagtcggtctggctcccctggtcgtctcctgagccacacatac
ggcaggatccccagggcaactggagtgacaacgccatcagacaggaggcctaaagtcccc
cgcagtcatggctgcagccgagacaccagtccagacagatcaggcctggcgaggagtcgt
atcccccggcccagcatgagtcagggctgcagcagggacacctctagggagagcagccgg
gacaccagccccgctcggggattctctcctctggcgtccagacgtgtctcccgctccacc
agtgctctccactcggctgagtctgtgggccactcagagcgtctaggtctggcccaccag
gcccgtatctcagcctctgtcaacgccatgaggatcctcaacaccgggaccgaggtggag
gcagctgtagctgacgccctgttactaggagacgccaggaacaacaagcggcggccagtc
aggcggcggtacgagtccccgggcatctactcagacgacgacgctaacagtgatgccagc
agcgcctgctctgagcgctcgtatggctcgcggaacggcggccagtcacactacatgaga
cagacggaggacgtggccgaggtgctgaaccactgtgccagttccaactggtctgagagg
aaggagggactgctgggactacagaacctgctcgttagccagagaattctcagtcgtgtg
gagctgaagcggttgtgtgagatcttcactaggatgtttgctgacccacacagcaagcga
gtgttcagcatgtttctggagaccctggtagacttcatcaccctgcacagagaggacctg
caggactggctgtttgtcctgctcacccagctgctgaagaagatgggagctgacctcctg
ggttccgtacaggccaaggtccagaaggctctggacgtcaccagggactcgttcccgttc
gaccagcagttcaacatcctgatgcgtttcatcgtggaccagacccagacccccaacctg
aaggtcaaggtggccatcctgaggtacattgagtgcctggcccgtcaaatggaccccgca
gactttatcaactccagcgagacacgcctggccgtctcccgcatcatcacctggaccacg
gaaccgaagagctccgacgtccggaaggcggcccaggtggttctgatcgccttgtttgag
ctgaacaccccagagttcaccatgctgctgggggccctgcccaagaccttccaggacgga
gccactaaactgctgcatagccacctgcggaactccagcaacaccggagtggcttctccc
agtagcaccatgggacggactcctcccccgcctcgccaccccagcagtcgcagcagcccc
ctcacctctcccaccaactgctcccgtgggggcgcgctctctcccagtcggctatggggt
tggagtgccgatggcctgtcaaagtacccccctcccttccctactcctctctcctccacc
cctgctgccccctccctgaagaccctacgaagtgcttactctcccagcatgttggagtac
gacacagagaacctgaacaccgatcagatttatagctccctgcgaggcgtcactgaggcc
atccagaacttcagcttccgcagtcaggaggacctcatggagccgggcagaggcaagaga
gaggacatgccgggtgttggaacagcatcacactctggtgccgacgtggtggaggggccc
gggggtcgcacggccctggacaacaagacctccctactcaacaccccctccccgcgttcc
ttctccgggccccggggccgcgactacaacccctacaactacacagacaccatcagcgcc
tacgacaaggctgccctgaaagagacggtatacgaggacaacgtggagcagcttcgagat
ggccgccaagagtgtggtggagaaaacaagatgctgcacaccaagaacagttccccttcg
gagcagctggaactggcgggtgagctgctgaaggagctgtctaaccccagtgagaggcca
gaggagaggaggggagccctggtggagctgctgaagatagcccgggaggacagcctggca
gtgtgggaggaacacttcaaaaccatgctgctcctgctgctggagaccctgtcagaccaa
gatcacaccatccgggccctggcactacgagtgctgaaggaaatcttacgtaaccagcca
gcccgcttcaagaactatgcagagctcaccatcatgaagactctggaggcacacaaagac
tcccacaaagaggttgtgcgggcagcagaggagtcagcctccaccctggccggctccatc
cacccagagcagtgtatcaaggtgctgtgtcctatcgtccagacggctgactaccccatc
aacctggcttccatcaagatgcagaccaaggtgatcgaacgcatcaccaaggagtccctc
caccagctgctgcctgacatcataccaggactactgcaggggtatgacaacacagagagc
agtgtgaggaaggccagtgtgttctgtctggtggctgtctactctgtcatcggtgaagag
ctgaagccctacctggcccagctcacaggaagcaagatgaagctgctgaacttgtacata
aagagagcccagacgtccaccagcaacagcagcagctcttcagacatctcctcatactaa
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integrated database retrieval system
