Oncorhynchus kisutch (coho salmon): 109906720
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Entry
109906720 CDS
T09179
Name
(RefSeq) E3 ubiquitin-protein ligase Midline-1-like
KO
K08285
midline 1 [EC:
2.3.2.27
]
Organism
oki
Oncorhynchus kisutch (coho salmon)
Pathway
oki04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
109906720
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
oki04121
]
109906720
Enzymes [BR:
oki01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
109906720
Ubiquitin system [BR:
oki04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
109906720
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
COS
SPRY
ANCHR-like_BBOX
zf-B_box
fn3
zf-RING_UBOX
RING_XB3-XBAT31
zf-C3HC4_4
zf-C3HC4
zf-C3HC4_2
PRY
zf-C3HC4_3
Ig_DSCAM-DSCAML_C
zf-RING_2
Pur_ac_phosph_N
zf-RING_5
Motif
Other DBs
NCBI-GeneID:
109906720
NCBI-ProteinID:
XP_020360168
Ensembl:
ENSOKIG00005016701
LinkDB
All DBs
Position
LG16:complement(43746430..43790797)
Genome browser
AA seq
685 aa
AA seq
DB search
MEALESELTCPICLELFEDPLLLPCAHSLCFGCAHRILVSHCASNEPVQSIGAFQCPTCR
YVISLSPQRGLEGLKRNVTLQNIIDRVQRAASSGPLALLPHSGPNSPSEDAGRFALALIP
TSTAMTSPGTPPSHVQCQFCEQDPPQDAVKTCVTCEVSYCDECLRATHPNKKPFTGHRLI
EPMSDCHLRGLQCLEHEEEKVNMYCVTDEQLICSLCKLVGRHRDHQVAALSDRYEKLKQA
LDSNLSHLVKRNNELEGLMGKLIQTCQHVEVNASRQEGKLMEECDLLIDIIQQRRQIIGT
KIKEGKAVRIRKLAQQISNCKQCIERSSALITQADQTLKETDHARFLQTAKSITERVSMA
TASSQVLIPEINLTDTFDTFALDFTKEKKLLESLDYLTAPSPPGIREELCTASYDTITVH
WTSDDEFTVLSYELQYAIFTGQANIVSLCNSADSWMIVPNIKQNHYTVHGLQSGTKYIFI
VKAINQAGARSSEPGTLKTNSQPFKLDPKSAHKKLKISHDNLTVERDETASKKGHGQERF
TSQSSYGVVGNVYIDSGRHYWEALIGGSTWYAVGIAYKSAPKHEWIGKNSASWVLCRCNN
SWVVRHNSKELAIEPSPHLRRVGVLLDYDAGSLTFYDAVGSQNLHTFHVSFAQPVCPVFN
VWNKCLTVLTGLPIPEHLEGLETQD
NT seq
2058 nt
NT seq
+upstream
nt +downstream
nt
atggaagcgctggagtcagagctgacttgcccaatctgcctcgagctctttgaggaccca
ctgctcctgccctgtgcccacagcctgtgcttcggctgcgcccatcgcatcctggtatcc
cactgcgcctccaacgagcccgtccagtccatcggagcattccagtgccccacctgccgc
tatgtcatctctctcagtccgcagcgtggcctagaaggactgaaacgcaacgtcaccctc
cagaacatcatcgaccgcgtccagagggccgcctcctccggccccctggccctgctgccc
cacagcgggcccaactcccctagcgaggacgccgggcgattcgccctggccctgatcccc
acctccaccgccatgaccagccccgggacgccgcccagccacgtgcagtgccagttctgc
gagcaggacccgccgcaggatgccgtcaagacgtgtgtgacgtgcgaagtgtcatactgt
gacgagtgcctgcgtgccacgcaccccaacaagaagcccttcacgggccaccgtctgatc
gagcccatgtcggactgccacctgcgggggctacagtgcctggagcacgaggaggagaaa
gtgaacatgtattgcgtcaccgacgaacagctcatctgctctctgtgcaaactggtagga
agacaccgagaccaccaggtggcggccttgagcgaccgctacgagaaactcaagcaagcg
ttggattccaacctgagtcatttggtcaagaggaataatgagttggaagggttgatggga
aagttgatccaaacctgtcaacatgtagaggtcaatgcatcgcggcaggagggaaagctg
atggaagaatgcgacctcctgattgacatcatccagcaaaggaggcagatcattgggacc
aaaatcaaggagggaaaggcggtccggatcaggaagctagcccagcagatctccaactgt
aagcagtgcatcgagaggtcctctgctctcatcacccaggccgaccagaccctgaaggag
acggaccacgcccgcttcctccagaccgccaagagtatcaccgaaagggtttccatggcg
accgcctcctctcaggtcctgattccagagatcaacctgacggacacgtttgacacgttc
gctctggacttcaccaaggagaagaagctgctggagagcctggactacctcacagcacca
agtcctccgggcatcagagaagagctctgcactgcatcgtacgacaccatcaccgtccac
tggacctcagacgacgagttcacagtgctttcctatgagctccagtatgctatcttcaca
gggcaagccaacattgtcagcctgtgtaactctgcagacagctggatgattgtgcctaac
atcaagcagaaccactacaccgtccacggcctgcagagcggcaccaagtacatcttcatc
gtcaaagccatcaaccaggcaggtgcccgcagcagtgagccagggacactcaaaaccaac
agccaacctttcaagctggaccccaagtccgcccacaagaagctgaagatctcccatgac
aacctgacggtggagcgcgacgagacggcatcgaagaagggacacggccaggagcgcttc
accagccagagtagctacggcgtcgtcggcaacgtttacatcgacagcggacgccactac
tgggaggccctgattggaggaagcacatggtatgcggtgggcatcgcctacaagtcggcc
cccaagcacgagtggattggcaagaactcggcctcctgggtcctgtgccgctgcaacaac
tcgtgggtggtgcgccacaacagcaaggagctggccatcgagccttcaccccacctgcgc
cgtgtgggtgtcctgctggactacgacgccggctcacttaccttctacgacgccgtgggc
tcgcagaacctgcacacgttccacgtgtccttcgcccagccagtgtgtcccgtcttcaat
gtgtggaacaagtgtctgactgtcctcacgggtctgcccatccccgaacacctagaaggg
ttggaaacccaggactga
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