Oncorhynchus kisutch (coho salmon): 109906933
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Entry
109906933 CDS
T09179
Name
(RefSeq) PR domain zinc finger protein 1-like isoform X2
KO
K24501
PR domain zinc finger protein 1 [EC:2.1.1.-]
Organism
oki
Oncorhynchus kisutch (coho salmon)
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
oki03000
]
109906933
Transcription factors [BR:
oki03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
109906933
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
PRDM2_PR
zf-H2C2_2
zf-C2H2
SET
zf-C2H2_4
zf-C2H2_6
zf-C2H2_jaz
zf-met
STL11_N
zf-C2HE
C2CH-3rd_BIRD-IDD
Zf-C2H2_ZNF451
Zf-C2H2_ZNF451_C
zf-MYST
Motif
Other DBs
NCBI-GeneID:
109906933
NCBI-ProteinID:
XP_020360341
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Position
LG17:36725462..36737224
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AA seq
716 aa
AA seq
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MKMKLETAPDMSEWQEDDFALNCTYIVPDQMSDPSIGLPKAMMSIPRNLTFEYNTENEVT
GVFSKEYIPQGTRFGPLQGDIYNKDNVPKQANRKYFWRIYNRGRLYHFIDGYDVRSSNWM
RYVNPARSLSEQNLVACQNGRDVYFYTIRPVEANQELLVWYSQEFAGRLCSQPGDELKQK
HIWGDVRESEFTKQHLPQPTWLLKKKDDMKDEREDEGEERIDVEVLERDTPPDTPDDQIM
DFSQKMEKEEVTQGHQGAIPSPQPDQREPNLASHDYGFPEHHTIAPSPHRDLPLHLHGLY
SHREGLVSSYPLYYPSRPLQSTHPLLPTYSRPHYPHLLPQYSPPFPGMLPSRGPLQHSSY
LGSDGLPYPSMTYQPGLLPVPLPYPGATQGGLKERTPNMSPPHGAPATPELSPLPKQEHQ
MPLQSPSGCEEAMNLSLAMPKSSPSPPAAPRYKSQPYPLKKQDGKIKYECNVCLKTFGQL
SNLKVHLRVHSGERPFQCHLCQKSFTQLAHLQKHHLVHTGEKPHECTVCDKRFSSTSNLK
THLRLHSGEKPYECKLCSTKFTQYIHLKLHRRLHSARDLPYHCPLCAHAFLHRFSLRIHQ
RSCCPASQAHAKPHAHAHICDLVERFDTSPEADTLPEGAGPAQVEAAVERWVARSLEGRD
GKEDQSEATLLLKALTAAINTPAPPTTSSQSPTSAYQERASVVRFYNRPMVKMQGQ
NT seq
2151 nt
NT seq
+upstream
nt +downstream
nt
atgaagatgaagctggagacagccccagatatgagtgagtggcaagaggacgactttgcc
ctcaactgcacctacattgtccctgaccagatgtcagaccccagcattggcctgcctaaa
gccatgatgtccataccccgcaacctcacctttgagtacaacacagagaatgaggtgaca
ggcgttttcagcaaagagtacattccccaaggaactcgcttcgggcccctgcaaggtgac
atctacaacaaagacaacgtccccaaacaggccaacaggaaatacttctggcggatctat
aacagggggcggctataccacttcatcgacggctatgacgtgaggagcagcaactggatg
cgctacgtcaacccggcgcgctcgctgtccgaacagaacctggtggcgtgtcagaatgga
cgagacgtctacttctacaccatccggcctgtggaggccaatcaggagctgctggtgtgg
tacagccaagagttcgcagggagactgtgcagccaaccgggagacgagctcaaacaaaaa
cacatatggggagatgtcagagaatctgagttcaccaaacaacacctacctcagccgacc
tggctcctgaaaaagaaggacgatatgaaggacgagagagaagatgaaggagaggagaga
atcgacgtagaggtgctggagagagacactccacccgacacgccagacgaccaaatcatg
gatttcagccagaagatggagaaggaggaggtaacccagggccaccagggagccataccc
tctcctcaacccgaccagagagagcccaacctggcatctcacgactacggtttccctgag
caccacactattgccccctccccgcaccgtgacctccccctccacctccacgggctctac
agccacagagagggcctagtgtcctcctaccccctctactacccctccagaccccttcaa
tccacccatccgcttctccccacatacagcaggccccactacccccacctcctcccccag
tactccccacctttccctgggatgctcccctccagaggccccctgcagcacagtagctac
ctgggtagcgatggacttccatacccctccatgacttaccagcctggtctgctcccagtg
cctctgccctaccccggagctactcagggagggctgaaagagaggaccccaaatatgtca
cctcctcatggagccccagccaccccagagctctcccccctgcccaagcaagagcaccag
atgcccctgcagtcaccctctggctgtgaggaggccatgaacctcagcctggccatgcca
aagagcagcccctcgccacccgctgcccctcggtacaaatcccaaccctaccccctgaag
aaacaggacggaaagatcaagtacgagtgcaacgtctgcctcaagactttcggacagctg
tccaacctcaaggtgcatctgagagttcacagtggagagaggcccttccagtgtcacctc
tgtcagaagagcttcacccagctagcccacctgcagaagcaccacctggtccacacagga
gagaaaccacacgagtgcacggtgtgtgacaagcgcttcagtagcaccagcaacctcaag
acccacctgcggctccactcaggtgagaagccctacgagtgcaagctgtgtagcacgaag
ttcacccagtacattcacctcaagctgcaccgacgcctgcatagcgcccgcgacctcccc
taccactgcccgctctgcgcccacgccttcctccaccgcttctcgctgcgcatccaccag
cgcagctgctgtcccgcttcccaggcccacgctaaaccccatgcccacgcccacatctgt
gatctggttgagcgctttgacaccagccccgaggcggacacgctgcctgaaggggcaggg
ccggcccaggtggaagctgcagtggagcgctgggtggcccggagcttagaagggcgagac
ggcaaggaggaccagagtgaagccaccctgctgctcaaggccctcacggcggccattaac
accccagctcctcccaccacctcatctcaaagccctacttcagcctatcaggagagggct
agcgtggtacgcttctacaaccggccaatggtgaaaatgcaagggcagtag
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