Oncorhynchus kisutch (coho salmon): 109907088
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Entry
109907088 CDS
T09179
Name
(RefSeq) eukaryotic translation initiation factor 4B-like
KO
K03258
translation initiation factor 4B
Organism
oki
Oncorhynchus kisutch (coho salmon)
Pathway
oki04150
mTOR signaling pathway
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09130 Environmental Information Processing
09132 Signal transduction
04150 mTOR signaling pathway
109907088
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oki03019
]
109907088
03012 Translation factors [BR:
oki03012
]
109907088
Messenger RNA biogenesis [BR:
oki03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
109907088
mRNA cycle factors
Stress granule specific factors
109907088
Translation factors [BR:
oki03012
]
Eukaryotic type
Initiation factors
eIF-4
109907088
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
Motif
Other DBs
NCBI-GeneID:
109907088
NCBI-ProteinID:
XP_031649207
LinkDB
All DBs
Position
LG17:78298690..78313049
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AA seq
428 aa
AA seq
DB search
MSAKFCVGRVFLERDGFTVLKCILFPRVPISHALYQEGLYRGGRCREGVGMEPCKHRTLQ
ATKKKGNKTLSLTNFMAEDKGGNAPPSYPTKPTSSWADETDDLDTEVSTSWHTEEDISRA
PAVDRSILPTAPRSAREPNIDRSCIPRGPPYTAFLGNLPYDVTEDSIMDFFRGVGISAVH
LPREPSNQDRSKGFGYAEFDDVESLLSALSLNKENFRNRRILVDIADCFDCRASGGGGGG
GGRRGSGDRYGDQYERWEECRCDRGAVERPKLILKPRSLSKEVEQSSAPSAPSDRAASIF
GGAKPVDTAAKEREVEERLKREQEKLQRELEDRITDHNPRERHPSWRSEDQRAGHFQTGS
ESSQTRQPWPILQSLQAQEERALLPCGRALPDKTVRLAPPPKENAWAKRTTPVGGSSEGE
ARPPSPPQ
NT seq
1287 nt
NT seq
+upstream
nt +downstream
nt
atgtcagctaaattctgcgtgggccgggtgtttttagaaagggatggattcaccgttttg
aaatgcatactttttccgcgtgtgccgatttcacatgctttgtatcaggaggggctgtat
cgtggcggacgctgcagggagggcgtgggcatggaaccatgtaaacatcgcactttacag
gcaactaagaagaaggggaataagaccctatccctgactaacttcatggcagaggacaag
gggggtaatgcacccccaagttaccccaccaagcccactagcagctgggccgacgagaca
gatgacctagacacagaggtatccacctcctggcatacagaggaggatatttcccgggcc
ccagccgtcgaccgctccatcctgcccacagcaccccgttcagcccgggagccaaacatt
gaccgctcttgtattcctcgcggtcccccttacaccgccttcctgggcaacttgccctac
gacgtgactgaggactccatcatggacttcttcaggggcgtggggatcagtgcagtacat
cttcctagagaacccagtaaccaagaccgctcgaagggttttggctatgctgagtttgat
gatgtggaatctctcctgagtgccttgagtctaaataaagagaacttcagaaacagaagg
atccttgtggacattgcagattgttttgactgtcgcgccagtggtggtggtggtggtggt
gggggtcgcaggggtagtggggatcgctatggtgaccaatacgagagatgggaggaatgc
cgttgtgaccgaggtgctgtggagaggcccaagttgatactgaaaccccgtagcctatct
aaagaggtggagcagagcagcgccccgtctgccccctcggacagggctgcctccatcttc
ggtggggccaagccagtggacacggctgccaaggagagagaggtggaggagaggctgaag
agggaacaggaaaaactgcagcgagagctagaagacagaatcacagaccacaatcccaga
gagaggcaccccagctggcgcagtgaggaccaacgtgcaggacactttcagactggcagt
gagtcttcccaaaccaggcagccgtggccaatcctgcagagcctccaagcgcaggaagag
cgagccctcctcccctgtggccgagccctgccagacaagacagtccgcctcgctccacct
cccaaggagaacgcctgggccaagaggaccacgcccgttgggggctccagtgagggcgag
gcccggccaccgtctcccccgcaatga
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