Oncorhynchus kisutch (coho salmon): 109907144
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Entry
109907144 CDS
T09179
Name
(RefSeq) zinc finger protein 40 isoform X1
KO
K09239
human immunodeficiency virus type I enhancer-binding protein
Organism
oki
Oncorhynchus kisutch (coho salmon)
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
oki03000
]
109907144
Transcription factors [BR:
oki03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
109907144
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C2H2
zf-C2H2_4
zf-H2C2_2
zf-C2H2_jaz
NOA36
zf-C2H2_16
Motif
Other DBs
NCBI-GeneID:
109907144
NCBI-ProteinID:
XP_020360518
Ensembl:
ENSOKIG00005008183
LinkDB
All DBs
Position
LG17:complement(9073556..9177348)
Genome browser
AA seq
2803 aa
AA seq
DB search
MLSDSEERRHTETSEQIPTTEQFSAICEDKIEEAQKELKDPKASAQKGINECGRTSADNI
KGLKRKKVVTENQLKKIPKSPVKKPLQSKTSVATLQGTSSKEAVNSCSNPDSPSRNPASS
PSRNRDTEYLRPVAESSEGVTSSIDSDRLKQREVASSKPQSLDPVSGKEGSASGVGESEQ
LKDRKSGETGCEGDATYHTNAPLEVLLKAMESDFSSLAERNTHVPVTSVGEPSQTLSAQF
ISELNAMPAVHFGLQTQPGHLQTYFVNKQESYTTMQASTQATALQNSQHATQYFSNREKP
VLQMSFSTGPSAARTHTPIPSGSNSLPKSQPPVVHTCQSLSASVPSTIQVPVTPGYNPVH
MATVVNFGLEQMCSISPKHQKPKKQGKYVCEYCSRACAKPSVLLKHIRSHTGERPYPCVT
CGFSFKTKSNLYKHKKSHAHAIKLGLVARSDSGSGSLSVESDKAPGTHSDVEESGDSDEE
SSTADLDPDSSQGSVAAFSESSLQSAGTTQGNHGDAGDLSAVFEMLKPTTSQRRYESKGT
AGLPKVVVYPVNVSPQRADSPRVADCTPEQATAQRQRDFQTAHLRSSITVLSSLKEVDCT
IPLQDARSEDEDQQCRSPPGGGHGLLQRQQATDVSQQQQGKCLLSPRSLGSTDSGYFSRS
ESADQAMSPPSPFVKLTPPTGMDVTKNALPNLSAVVATVMNVASVEKPHVVQGQMRPPLV
TKALSLEERISKLISDNEAVVDDKQLDSVKPRRTSLSRRGSIDSPKSYIFKDSFQFDLKP
IARRSSSSSDIPKSPFTPTENSKPVLLLSVPNQYPPMDCFPITRSNSMPTTPGHSGIPPN
VTQQPHILRICQSFDEKMSSLNDDVFSSAPSTPNPAIHSRTLVRQVAVEHFSTSEVLTSV
RSMDEGYHGSSVSTVTMQRSRSFEHAQDPNRKPQQSKGTMYECETCRNRYRKLENFENHK
KFYCSELHGPKNKLMSVRETELDVFQRGMQQPLVPRTTGISGIMDQQQSIRKRRKMKSVG
DDDDQSPTDTNPPCSVSFDSCQLSTASSGRTFSQHSIMVDLLPKSNPPQIPQIQLIAGVT
DATESRLSPIRETQVNTSGKERGDLQRQGSGTSVIRHTNSLSRPNSFEISESIDRASPVD
FLDKDGHSTGKTKADATANLSLESYHEKMSIPKCANQGGMENRVDRTLAAVAESCAAVQQ
SRLVRQNNIPEILVTEEPDREHDGHSTEQGEKAADTFNWPQRSESLSKLPTEKLPPKKKR
IRLAQMEHSSGESSFESSLSRSLSRDSSLSRCSSVSASFDWDEPFRSESPSRGECANKIC
ELQGLPIAFNTLGVPGMMRRAASEQISCTQPSVEISCDYRSKSFDCGSGSPSRSLPPNRS
MSPMELRKSAQTSSSPHVPLIERRRGPLVRQMSLKIGPESQQHVGNHAIAVQRLPTVISI
SQQRPQQMQQTANNPPIAQPFILHSGETLLQHNEKIVQSINLGSQSQLPQVHGLPHPWHL
TSRVQTCQNRQQSAVNVMISQEDAQSKSADCQDKKSFVPKYQLRCPALRSSKTYSSTQGT
QTTMPVLTIPIANRMQSVSKSSDVLHNVYVAQPCHQIVGNKTQSIVLPLGLQNIRPSQNQ
PSAPQLPQILITHELMHPSPSVASKGSIYNLHVVDTDTKTVPDMNKDRPPASAGLQVKHS
LVSKTQNHFGETQIAPSLGSLHCTQKMAAVTLCPQQEPIASSKRMLSPANSLDIAMEKHQ
KRAKDEHGAACLTDGRSVNYLNSNMAEVTRQRKLMLVRQVCATESADSPIETVAPPLQHE
KPEDEKNAQTPNNRKTMTPESTGQDEPSTVVAQLQPSFALTTSLGSHVSSVPANDCLKPQ
DKSEEQKLPPAKSPIRTSTFHGQVKLASSVSVVNTRDSHRLSFPSLKTTTTFTWCYLMKR
KPLHVPQMDQKISAYSTWAVSPNNPHPLGLPTKVVMSLFNSKQNSKKIHYTEAITTSMKS
DILAYSSKLKDVMHKVLKHQKSLTTENNSKVKPETQVSSESDKDSSTSKLEPRRVKIFDG
GFKSNEEYVYVRGRGRGKYICEECGIRCKKPSMLRKHIRTHSDVRPYHCTHCNFSFKTKG
NLTKHMKSKAHSKKCMEIGVEDQDTEDSGDRSQVGSTDRPDSDGEDSEGADDDNEDDNEE
EEDDSQAESGLSTNPSVSASPQHIPSSLQAELPPSSLLAQLSIHHHPAALSLPQPPYSDC
HTHDASDTESVPMLSPVSLVKQMSISGGCSSPLPYSPPPHTSGTESVPMMSPVSPCRHMS
ISGGCSIPLPYSPPPHTSGTESVPMMSPVSPCRQMSIDYPDFDVPPCPPAQGKSCFKLGQ
DGTSVSDPGVPVGTDVSTQTSSYSLQTSSYSPLHFPSQRPTQGPGATQGTNTHLFSHLPL
HSQQPSHSPYSMVPMRGIQLVPASLAAYSTFVPIQAGPVQLTIPALSVIHRNTSPLPFPI
TSNSPEPDGMVSPSSPVNQPLVVQEPISSIMPCFPLGQVAGLGQVAGLGKVTGLGKVTGL
GQVTGLGQVTGLGQVTGLGQVAGLPALRASHHTLQSMGLETLTLTSSEGLTSTQLLGLQV
LAHTSTSQSRTVPHHHTHIPGLQILNIAVPTLIPSLSPLSGLSPLAGPFERQGSPDAPAA
PRTPQPSSQTETEPSVSCLSAASPPTATLRGSLAQELASSCSRSSRSGPGGSGGSGGSRG
SDDTQTSEKKEKVTTSLAQPAPASARAPTPGCAPVSAPAPGSALAPAPAPDRGLEGDKNP
PAEGASEPVTPRRQSMLSRQQETENYNDDSASSDDEDRLVIAT
NT seq
8412 nt
NT seq
+upstream
nt +downstream
nt
atgttatctgactctgaggagagaagacacacagagacttcagaacagattccgaccaca
gaacagttttctgccatttgcgaagataaaatcgaagaagcacagaaagaactgaaagat
cccaaagccagtgcacagaaagggatcaatgagtgtggtcgaacaagtgcagataacata
aagggactgaagaggaaaaaggttgtgacagagaaccagctgaagaaaatacccaaatct
cctgtgaagaagcccttacagtccaagacctctgtggcaacactccaaggtacctcgtcc
aaggaggctgtgaactcctgctccaatcccgacagcccctctcgaaaccctgccagctca
ccaagccggaacagagatacggagtaccttcggcctgttgctgaatcctctgagggagtg
acatcatccattgacagtgataggctgaagcagagggaagtggcttcctcaaagccacag
tctcttgatccggtcagtggtaaagaggggtctgcctctggtgttggggaatctgagcag
ctcaaggaccgtaagagcggcgaaactggatgtgaaggtgacgctacttaccacaccaac
gctccacttgaggtcttgctcaaggctatggaatcagatttcagctccttggcagaaaga
aacacacatgttccagtcacatctgttggagaaccaagtcaaaccctttctgcccagttt
attagtgaattgaatgctatgccagctgtacattttggacttcaaactcagcctggccat
ttgcaaacttactttgtaaataaacaagagagctacaccaccatgcaggcctcgacccag
gctactgccttgcagaattcacagcatgctacacagtatttcagcaaccgggaaaagcct
gttctacaaatgagcttcagtactgggccctccgctgcccgtactcatacacctattcca
tctggctccaattccttacccaagagccagccaccggtggtccacacatgccagtcccta
tctgccagtgtccccagtaccattcaagtccctgttacacctggttacaacccagtccat
atggccacagttgtaaactttggtcttgaacagatgtgtagcatctccccaaagcaccag
aagcctaagaagcaggggaagtatgtgtgtgaatactgcagtcgggcatgtgcaaagcct
agtgtgctcctcaagcacatcaggtcccacacaggagaacgtccctacccatgtgttaca
tgtggcttctcattcaagaccaagagcaatctgtacaagcataagaaatcccatgctcac
gcaataaaactggggcttgtggcacgttccgactctggaagtgggtccctctctgtggag
tctgacaaagcacccggaacacattcagatgtagaggaaagcggggacagtgacgaggaa
agtagcacagcggacctggaccctgactcgtcacaaggcagtgttgcagcgttctctgag
agcagtttgcagagtgcaggcacaacacaaggcaaccatggggatgcaggggacctatcg
gctgttttcgaaatgcttaaaccaacgacgagtcagaggcgctacgagtccaaagggaca
gctggcctcccgaaagtagtcgtctatcctgttaatgtctcgcctcagcgggcggacagt
ccaagagtcgcagactgtacccctgagcaggctactgcccaaaggcaaagggacttccaa
acggcacatctaagatccagcatcaccgtcctgtcgtccttgaaagaggtggattgcaca
atccccctgcaggatgcaagaagtgaggatgaggatcaacagtgtaggtccccaccagga
ggcggacatggtctgcttcaaaggcagcaggccacagacgtttctcagcagcagcagggc
aagtgtctgcttagtccccgcagtttaggcagcacagactctgggtatttctcacgttct
gaaagcgcagaccaggccatgagtcccccgagtccctttgtaaagctaaccccaccaaca
ggcatggatgtcaccaaaaatgcacttcctaatctctctgcagtggttgccactgttatg
aatgtggcttccgtggagaagccacatgttgtgcaaggacaaatgcgtccaccattagta
acaaaagcactctctctcgaagagcggatctcaaagttaatatcagacaatgaggcagtg
gttgacgacaaacagctggacagtgtcaaaccaagaaggacctctctttccaggagaggt
agcatagactcccccaaatcttatatatttaaagactcttttcagtttgaccttaaacca
atagcgagaaggtcaagttccagctcagacatacccaagtccccattcacccctacagaa
aactctaagccagtattgctattgtctgttcctaatcagtatccaccgatggactgtttt
ccaataacaagaagtaattctatgcccacaactccagggcactcgggtatcccaccaaac
gttacccaacaaccccacatactacggatctgccagtcttttgatgaaaaaatgagttcc
ttaaacgatgatgtgttttcatctgctccctctaccccaaatccagcaatacattctcgt
acccttgtacggcaagtagcagtggaacatttctccacaagtgaggtccttacatcagtc
cgttccatggatgaaggttaccatggttctagcgtttccactgtgacaatgcaaaggagc
aggtcttttgagcatgcacaagacccaaaccgaaagcctcagcagagcaaaggcacaatg
tatgagtgtgagacctgtcgtaaccggtaccgaaaactagaaaactttgaaaatcacaag
aaattctattgttcagaacttcatggtccgaaaaacaagctgatgtctgtcagagagact
gagctggatgtttttcagcgtggcatgcagcagccattagtccccagaacaacaggtatt
tcaggcataatggaccaacagcaatcaattagaaaaagaaggaaaatgaagagtgttggt
gacgatgatgaccaatcaccaactgacaccaatcccccatgctctgttagttttgattct
tgccaactatcaacagccagttcaggtcggacattttctcagcactctatcatggttgat
ctactgcctaaaagcaacccaccacaaatacctcaaatacagctaatagcaggagttaca
gatgcaacagaatcaagactgtcaccgatcagagaaacccaggttaacacctctggtaaa
gaaagaggcgacctacagaggcaaggcagcggtacatcagttatcagacataccaactct
ctgagcaggcccaattcatttgagatctctgaatctattgacagagcctctccagttgat
ttcctggacaaagatggccatagcacaggaaaaactaaggcagatgctacagccaatctt
tcattagagagctatcatgaaaagatgtccatacctaaatgtgccaaccagggagggatg
gaaaaccgtgttgaccgcacattagcagcagtggctgagagctgcgctgctgtccagcag
tctcgcctggttcgccaaaacaacattcctgaaatcctggtcacagaggaacctgatcgg
gagcatgacggtcatagcactgagcaaggggaaaaggctgcagatacattcaactggccc
cagaggagcgagagcctgtccaagctacccacagagaagcttccacccaagaagaagaga
atccgtctggctcagatggagcactcctctggagaatccagcttcgagtcctcactgtct
cgaagcctcagcagggacagtagcctgtcaagatgttccagcgtatcagcctccttcgac
tgggacgagccattcaggtccgagagcccctccagaggagaatgtgccaacaaaatctgt
gagcttcaagggctcccaatagccttcaacaccctaggggtccctggcatgatgagacgt
gctgcctcagaacagatcagttgcactcaaccctcagtggagatatcttgcgactatcgc
agcaagtccttcgactgtggcagtgggtctcccagcaggtctctgccacccaacaggtca
atgtcaccaatggaactgcgaaagagtgctcaaacctcctcgtctccgcatgtacctctc
attgaaaggcgaagggggccactggttcgccagatgtctttaaagattgggccggagagt
cagcaacatgtcgggaatcatgccatcgctgtccagaggctccccactgtaatctctata
tctcagcagaggcctcaacagatgcaacagactgccaacaatcctcccattgcccaacct
tttattttgcattctggagaaactctcctgcagcacaatgaaaaaattgtgcaaagcatt
aacctgggcagccaaagtcaactgcctcaagttcatggtcttccacacccttggcaccta
acatcgagggttcagacatgccaaaatcgccagcaatctgcagttaatgtcatgatcagc
caagaagatgctcagagcaagtctgctgactgtcaagacaagaaaagctttgtacccaag
taccaactgcggtgtcctgctctgagatcaagcaaaacatactcttccacacagggtact
cagacaaccatgcccgtcttaacaatacccattgccaaccggatgcaaagtgtgtcaaag
tcttcagatgttctccacaatgtctatgtggcacaaccctgtcatcagattgtagggaat
aagacacagtcgatagtattgcctttaggcctacaaaacatccgaccttctcaaaaccag
ccaagtgcgccccaattgccacagatcctgataacccatgagctgatgcacccttccccc
tctgtggccagtaaaggcagcatctacaaccttcatgttgtagatacggacacaaagact
gtaccagatatgaacaaggacaggcctccagcatctgctggccttcaagtaaaacacagt
ttagtttccaaaacccagaaccattttggtgaaactcaaatagctccctccctgggctcc
ttacactgcacccagaaaatggcagctgtgaccctctgtccacaacaggagcccattgcc
tcaagcaagagaatgctctcccctgccaatagcttggacatcgccatggaaaaacatcag
aagcgagcaaaggatgaacatggtgcggcatgcctcactgacggcaggtccgtcaactac
ctgaactccaacatggcagaggtgactaggcaacggaagctaatgctagtccggcaggtg
tgcgccactgaatcagcagacagtcccattgaaactgtggctcccccactgcaacacgag
aaaccagaggatgaaaagaatgcccagactcctaataaccgcaagactatgacacctgaa
agcaccggacaggatgaaccatctactgtagttgctcaattacagccaagctttgcatta
accacctctctaggaagtcacgtctcctccgtgccagcgaacgactgcctgaagcctcaa
gacaagagcgaggaacagaaattgccccctgccaagtctcccattagaacctcgactttc
catggacaggtgaaactggcctcatctgtatctgtggtcaacacacgagacagccaccgc
ctgtctttccccagcctgaaaactaccaccaccttcacctggtgttacctgatgaagagg
aagcctctgcatgttccccagatggaccagaagatctcggcctactccacctgggcagtg
agccccaacaacccccacccactgggtctgcccaccaaggtggtgatgtctctcttcaac
tccaagcagaactcaaagaaaatacactacacagaggccataacgacaagtatgaaatca
gacatcttggcctattcaagcaagctgaaagacgtcatgcataaggtcctaaagcatcag
aagtctctaacaactgagaataacagcaaagtgaaacctgagactcaggtgagcagtgaa
tcagacaaggattcttccacatccaaactagagccacggagagtcaagatatttgatgga
ggattcaaatctaacgaagagtatgtgtacgtgcgtgggcggggtcgtggtaaatacatc
tgtgaggagtgtgggatccgttgcaagaagcccagcatgctccgtaaacacatccgcacc
cactctgacgtacggccctatcactgcacccactgcaacttctccttcaagactaaaggg
aatctgaccaagcatatgaagtccaaggcacacagtaagaagtgtatggagattggtgtg
gaggaccaggatacagaagactcgggagaccgtagccaggtgggcagtacagaccgccca
gattcagacggagaggactccgaaggtgctgatgatgacaacgaagatgataatgaggaa
gaggaggatgacagccaggctgagtcgggcctgtccaccaacccctcggtctcagccagc
ccccagcacatcccctcctccctccaggctgagctccctcccagctcccttctggcccag
ttgtccatccaccaccacccagctgccctgtcactcccccagcccccttactccgactgc
cacacccacgatgcctcagatacagaatccgtgcccatgctgagccccgtctccctggtc
aaacagatgtcaatctccggaggctgctccagccccttgccctactccccgcccccccac
acatctggcacagagtcggtgcccatgatgagccctgtctcgccgtgcaggcatatgtcc
atctccggaggctgctccattcccttgccctactccccgcccccccacacatctggcaca
gagtcggtgcccatgatgagccctgtctcgccgtgcaggcagatgtccatcgattaccct
gactttgacgtgcccccttgtccccccgcacagggcaagagctgcttcaagctcggccag
gatggcacttcagtgagtgacccaggtgtccctgtcgggacagatgtcagcactcagacc
tcctcctatagcctccagacatcctcctacagccccttgcactttccttcccagcgcccg
acccaaggaccaggggccacacaggggaccaacacccacctcttcagccacttgcctctg
cactcccagcagccctcacactccccctacagcatggtccccatgaggggcatccagctg
gttcccgctagcctggcagcctattccaccttcgtgcccatccaggctggccctgtccag
ctcaccatccccgccttgagcgtcatccaccggaacaccagccccctcccattccccatt
acctctaactcccctgagcccgatggtatggttagtccctcatcccccgtcaaccagcct
ctggtggtccaggagccaatcagtagtatcatgccctgcttcccccttgggcaggtggct
gggctggggcaggtggctgggctggggaaggtgactgggctggggaaggtgactgggctg
ggacaggtgactgggctggggcaggtgactgggctggggcaggtgactgggctggggcag
gtggctggtctaccggccctcagggcctcccaccacacgctgcagtccatgggtctggag
actctgaccctgaccagctcagaaggcctgacctccacccagctgctgggcctgcaggtc
ctggctcacacctccacctcccagagcaggacagtcccccatcaccacacccacatcccc
ggcctgcagatcctcaacatcgccgttcccaccctcatcccctccctcagccccctctcc
ggcctcagtcccctcgccggaccctttgagaggcagggcagccccgatgccccagcagcc
ccacggaccccacagccctcctctcagactgaaaccgaaccctcagtcagctgtctgtct
gctgcttcccctcccaccgccaccctgaggggaagtctcgcccaggaattggcatcatca
tgcagcaggtccagcagatcagggccgggaggttctggaggttccggaggttccagaggc
tccgatgacacacagacttcagaaaagaaagagaaggtaacaacatcgctagcacagccc
gccccagcctcagctcgagctccaactccaggctgcgctccagtctcagctccagctcca
ggctcagctctagctccagctccagcccctgacaggggcctggagggggataagaatcct
ccagcagagggagccagtgagcctgtcacgcctcggaggcagtcgatgctctcacgacag
caggaaacggaaaactacaatgatgactcagcatccagcgatgatgaggacagactggtc
atcgccacctga
DBGET
integrated database retrieval system
