KEGG   Oncorhynchus kisutch (coho salmon): 109907241
Entry
109907241         CDS       T09179                                 
Symbol
rab5a
Name
(RefSeq) ras-related protein Rab-5A
  KO
K07887  Ras-related protein Rab-5A
Organism
oki  Oncorhynchus kisutch (coho salmon)
Pathway
oki04137  Mitophagy - animal
oki04144  Endocytosis
oki04145  Phagosome
oki04148  Efferocytosis
oki05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:oki00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    109907241 (rab5a)
   04145 Phagosome
    109907241 (rab5a)
   04137 Mitophagy - animal
    109907241 (rab5a)
   04148 Efferocytosis
    109907241 (rab5a)
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    109907241 (rab5a)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:oki04131]
    109907241 (rab5a)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:oki04147]
    109907241 (rab5a)
   04031 GTP-binding proteins [BR:oki04031]
    109907241 (rab5a)
Membrane trafficking [BR:oki04131]
 Endocytosis
  Rab GTPases and associated proteins
   Rab GTPases
    109907241 (rab5a)
 Endosome - Lysosome transport
    109907241 (rab5a)
Exosome [BR:oki04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   109907241 (rab5a)
  Exosomal proteins of other body fluids (saliva and urine)
   109907241 (rab5a)
  Exosomal proteins of colorectal cancer cells
   109907241 (rab5a)
  Exosomal proteins of bladder cancer cells
   109907241 (rab5a)
GTP-binding proteins [BR:oki04031]
 Small (monomeric) G-proteins
  Rab Family
   Rab5/17/22/31 [OT]
    109907241 (rab5a)
SSDB
Motif
Pfam: Ras Roc Arf Gtr1_RagA MMR_HSR1 GTP_EFTU RsgA_GTPase AAA_16 MCR_beta
Other DBs
NCBI-GeneID: 109907241
NCBI-ProteinID: XP_020360688
Ensembl: ENSOKIG00005040055
UniProt: A0A8C7JST7
LinkDB
Position
LG17:complement(16199630..16206030)
AA seq 216 aa
MANRGGATRPNGSNAGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLT
QTVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNEESFARAKNWVKELQ
RQASPNIVIALSGNKADLASKRAVDFQDARSYADDNSLLFMETSAKTSMNVNEIFMAIAK
RLPKSEPAAAGANSGRNRGVDLTEAAQPTKAPCCSN
NT seq 651 nt   +upstreamnt  +downstreamnt
atggccaacaggggaggtgctacgagacccaacgggtctaatgctgggaacaagatctgc
cagttcaagttagtgctgctgggggagtcggcggtgggcaagtccagcctggtgctccgc
tttgtcaagggccagttccacgagttccaggagagcaccataggagcggccttcctgacc
cagacggtgtgtctagacgacacgacggtgaagtttgagatctgggatacggcgggacag
gagcgctaccacagcctggcgcccatgtactacagaggggcgcaggccgccatcgtggtc
tacgacatcacaaatgaggagtcatttgcccgggccaagaactgggtgaaggagctgcag
agacaagccagccccaacattgtcatcgctctgtcaggcaacaaggctgacctcgccagc
aagagagccgtcgacttccaggatgcccggtcttatgcagacgacaacagcttgctcttc
atggagacgtcggccaagacatctatgaatgtgaacgagatattcatggctattgcgaaa
agattgcccaagagcgagcctgcagccgctggagcgaacagtgggcggaacaggggcgtc
gacctaactgaagccgcccagccaaccaaggccccctgctgcagtaactaa

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