Oncorhynchus kisutch (coho salmon): 109907243
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Entry
109907243 CDS
T09179
Name
(RefSeq) TBC1 domain family member 5-like
KO
K18469
TBC1 domain family member 5
Organism
oki
Oncorhynchus kisutch (coho salmon)
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oki04131
]
109907243
Membrane trafficking [BR:
oki04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
109907243
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RabGAP-TBC
RabGap-TBC_2
Fungal_virus_P2_C
DUF7615
SNaCT9
Motif
Other DBs
NCBI-GeneID:
109907243
NCBI-ProteinID:
XP_020360693
Ensembl:
ENSOKIG00005040670
UniProt:
A0A8C7K9H0
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Position
LG17:16406782..16434377
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AA seq
865 aa
AA seq
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MQHPNFETQHPLQPDGEQEPGFDPLHNFNKNHSRGGSLDSSRLSYSESDSTFLSYRKEWD
DLFLNSNYLARIRQAGISGRLRSSRFRSVCWKLYLEVLPEDKSQWLNKTKELRAQYEKIK
ETHITNPRKAAGQQDLVVNNPLSQDEGSLWNKFFQDKELRGMIKQDVMRTFPEMRYFQDE
AVRTKLTDILFCYARENELLLYKQGMHELLAPIVFVLHCDHQAFQHASETAYPSEEMLSL
LNPMFHEHDAYAMFSQLMETAEPWFSSLEREVRRGKDEMLTSMPFARPQDSGPSVAIVTK
VNRIQDQLVKKHDVELHMHVNRLEIAPQIYGIRWVRLLFGREFPLQDLLVVWDALFADSI
TLDLVDYVFVAMLLYIRDALIASNFQTCLGLLMHYPPIGDIHTLLHKALFLRDPKNNPRP
ANYQFQQNLDYYKTRGADLVNNTRASGKMAPLNINKVSSSLLSFGRKLIAPALSGGGSSG
ISPINSEVLSAPSPVTVGPHPQAEPLLSGHAPLQTQTPPHSQHHRLLKSESMPVHLSKVS
GGVSQVPVPAHIFSDTKGQISRTASSSPSIESLSGGRGHTTASPPLPVTRESDTSTSSSP
LSATRKDSFFNITRSRSHSKTMMGKKEAEEELEAQVSFLQGQINDLEAMSKYCAKMMNTH
IGKIQEVILQEHLEKEDEVLVSLAGLKQIKDILKGALRFNQSLLEAEENEEITIADDHYD
ITSNAAAAIVEQLANCHHDKHPFQATPQRGDGDGEQKDREEEEHEHTESEQQVSPPESSL
SVGSEGKNWGDYILVSQDGELQPTEGGAERTPPIRLLRGSLRVEPEGVGVFQDPLMGAAS
GSSSPDEGSTHSKDYDFTIVNPQDL
NT seq
2598 nt
NT seq
+upstream
nt +downstream
nt
atgcagcaccctaacttcgagacccaacaccctctccagcctgatggagagcaggagcct
ggcttcgaccctctccacaacttcaacaagaaccacagccgtggaggatctctggatagt
agcaggttgtcttactcagagtctgattccaccttcctttcctacaggaaagaatgggat
gacttgttcctgaacagtaattatctggccaggattcggcaggcaggcatcagcggccga
ttgcggagcagccgattccgcagtgtgtgctggaagttgtacctggaggtccttcctgaa
gataagagccaatggctcaacaagaccaaggagctgcgagcccagtatgagaagatcaaa
gagactcacatcaccaacccccgtaaagctgcaggccagcaggacctggtggtcaacaat
ccactctcacaagacgaggggagcctgtggaacaagttcttccaggacaaagagctgaga
gggatgatcaaacaggacgtgatgagaacctttcctgagatgcgttacttccaagacgag
gctgtcaggaccaagctgacagacatcttgttctgttacgcccgagagaacgaactgcta
ctgtacaaacagggaatgcatgagttgttggctcctatcgtgtttgtcctgcactgtgac
catcaggcctttcagcacgccagcgagaccgcgtaccccagtgaggagatgctgtctcta
ctgaatcctatgttccatgagcatgatgcctatgccatgttctcccagctgatggagaca
gcagaaccctggttctccagcttggagagagaagtcagaagggggaaggacgagatgctg
accagcatgccgttcgcccgtccgcaggactcggggccgtctgttgccatagtgaccaaa
gtgaaccgcatccaggaccagctggtgaagaagcacgacgtggagctgcacatgcacgtc
aaccgcctggagatcgccccgcagatatacggcattcgctgggtgcgtctgctgtttggc
cgtgagttccccctgcaggacctgttggtggtgtgggatgccctgttcgctgacagcatc
actctagacctggtggactatgtcttcgtagccatgctgctctacatcagagatgccttg
atagcgagtaacttccagacctgtcttggccttctaatgcactacccacctataggagac
atccacaccctactacacaaggctctgttcctcagagatcccaagaacaatcctcggcca
gccaactaccagtttcaacagaatctggactattacaagaccagaggagcggacctggtc
aacaacacccgtgccagtggcaagatggctcctctcaacatcaacaaggtctccagcagt
ctgctcagcttcggtaggaagctcatcgcccctgctctgtcagggggtggctccagcggc
atctctccaattaatagcgaggtcctgtctgccccctcccccgtcactgtgggtcctcac
ccccaggccgagcccttgttgtctggccatgcacccctgcagacgcagacacccccccat
tcccagcaccaccgcttactcaagtctgagagtatgcctgtccacctgagcaaagtttca
ggaggagtctctcaggttcctgtcccagcccacattttctctgacacaaaaggccaaatc
tccaggacagctagctcctcccccagcatagagagcctctctggagggcggggtcacacc
actgcatccccaccccttcctgtcaccagggaaagtgacaccagcacgtcgtcttcgccc
ctctcggccaccaggaaggattccttcttcaacatcactcgctcccgctcccacagcaag
accatgatgggcaagaaagaggctgaggaggagttggaggcccaggtgtccttcctgcag
ggtcagatcaatgacctggaggccatgagcaagtactgtgccaagatgatgaacacacat
attggtaagatccaggaggtgatcctacaggagcacctggagaaagaagacgaggtgttg
gtgtcactggctggactcaaacagatcaaggacatcctgaagggagcgctgcgtttcaac
cagagcctgctggaggctgaggagaacgaggagatcaccatcgctgacgaccactatgac
atcacctccaatgccgctgcagccatcgtagaacagctcgccaactgtcaccatgacaaa
caccccttccaggccacaccgcagcgtggcgacggtgatggagaacagaaggaccgagag
gaggaagagcatgagcacacagagtcagagcaacaggtgtctcccccagagtcatctctg
tctgtgggttcggaggggaagaactggggcgactacatcctggtctcgcaggacggagag
ctgcagcccaccgagggaggggccgagaggacccctccaatcagactgctccgtggctcg
ctcagggtggagccggagggcgtgggggtgttccaggaccccctaatgggtgcagcgtct
ggctcctccagcccagacgagggcagcactcacagtaaagactatgacttcaccatcgtc
aacccccaggacctgtga
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