KEGG   Oncorhynchus kisutch (coho salmon): 109907243
Entry
109907243         CDS       T09179                                 
Name
(RefSeq) TBC1 domain family member 5-like
  KO
K18469  TBC1 domain family member 5
Organism
oki  Oncorhynchus kisutch (coho salmon)
Brite
KEGG Orthology (KO) [BR:oki00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:oki04131]
    109907243
Membrane trafficking [BR:oki04131]
 Endosome - Lysosome transport
  Rab GTPases and associated proteins
   Rab associated proteins
    109907243
SSDB
Motif
Pfam: RabGAP-TBC RabGap-TBC_2 Fungal_virus_P2_C DUF7615 SNaCT9
Other DBs
NCBI-GeneID: 109907243
NCBI-ProteinID: XP_020360693
Ensembl: ENSOKIG00005040670
UniProt: A0A8C7K9H0
LinkDB
Position
LG17:16406782..16434377
AA seq 865 aa
MQHPNFETQHPLQPDGEQEPGFDPLHNFNKNHSRGGSLDSSRLSYSESDSTFLSYRKEWD
DLFLNSNYLARIRQAGISGRLRSSRFRSVCWKLYLEVLPEDKSQWLNKTKELRAQYEKIK
ETHITNPRKAAGQQDLVVNNPLSQDEGSLWNKFFQDKELRGMIKQDVMRTFPEMRYFQDE
AVRTKLTDILFCYARENELLLYKQGMHELLAPIVFVLHCDHQAFQHASETAYPSEEMLSL
LNPMFHEHDAYAMFSQLMETAEPWFSSLEREVRRGKDEMLTSMPFARPQDSGPSVAIVTK
VNRIQDQLVKKHDVELHMHVNRLEIAPQIYGIRWVRLLFGREFPLQDLLVVWDALFADSI
TLDLVDYVFVAMLLYIRDALIASNFQTCLGLLMHYPPIGDIHTLLHKALFLRDPKNNPRP
ANYQFQQNLDYYKTRGADLVNNTRASGKMAPLNINKVSSSLLSFGRKLIAPALSGGGSSG
ISPINSEVLSAPSPVTVGPHPQAEPLLSGHAPLQTQTPPHSQHHRLLKSESMPVHLSKVS
GGVSQVPVPAHIFSDTKGQISRTASSSPSIESLSGGRGHTTASPPLPVTRESDTSTSSSP
LSATRKDSFFNITRSRSHSKTMMGKKEAEEELEAQVSFLQGQINDLEAMSKYCAKMMNTH
IGKIQEVILQEHLEKEDEVLVSLAGLKQIKDILKGALRFNQSLLEAEENEEITIADDHYD
ITSNAAAAIVEQLANCHHDKHPFQATPQRGDGDGEQKDREEEEHEHTESEQQVSPPESSL
SVGSEGKNWGDYILVSQDGELQPTEGGAERTPPIRLLRGSLRVEPEGVGVFQDPLMGAAS
GSSSPDEGSTHSKDYDFTIVNPQDL
NT seq 2598 nt   +upstreamnt  +downstreamnt
atgcagcaccctaacttcgagacccaacaccctctccagcctgatggagagcaggagcct
ggcttcgaccctctccacaacttcaacaagaaccacagccgtggaggatctctggatagt
agcaggttgtcttactcagagtctgattccaccttcctttcctacaggaaagaatgggat
gacttgttcctgaacagtaattatctggccaggattcggcaggcaggcatcagcggccga
ttgcggagcagccgattccgcagtgtgtgctggaagttgtacctggaggtccttcctgaa
gataagagccaatggctcaacaagaccaaggagctgcgagcccagtatgagaagatcaaa
gagactcacatcaccaacccccgtaaagctgcaggccagcaggacctggtggtcaacaat
ccactctcacaagacgaggggagcctgtggaacaagttcttccaggacaaagagctgaga
gggatgatcaaacaggacgtgatgagaacctttcctgagatgcgttacttccaagacgag
gctgtcaggaccaagctgacagacatcttgttctgttacgcccgagagaacgaactgcta
ctgtacaaacagggaatgcatgagttgttggctcctatcgtgtttgtcctgcactgtgac
catcaggcctttcagcacgccagcgagaccgcgtaccccagtgaggagatgctgtctcta
ctgaatcctatgttccatgagcatgatgcctatgccatgttctcccagctgatggagaca
gcagaaccctggttctccagcttggagagagaagtcagaagggggaaggacgagatgctg
accagcatgccgttcgcccgtccgcaggactcggggccgtctgttgccatagtgaccaaa
gtgaaccgcatccaggaccagctggtgaagaagcacgacgtggagctgcacatgcacgtc
aaccgcctggagatcgccccgcagatatacggcattcgctgggtgcgtctgctgtttggc
cgtgagttccccctgcaggacctgttggtggtgtgggatgccctgttcgctgacagcatc
actctagacctggtggactatgtcttcgtagccatgctgctctacatcagagatgccttg
atagcgagtaacttccagacctgtcttggccttctaatgcactacccacctataggagac
atccacaccctactacacaaggctctgttcctcagagatcccaagaacaatcctcggcca
gccaactaccagtttcaacagaatctggactattacaagaccagaggagcggacctggtc
aacaacacccgtgccagtggcaagatggctcctctcaacatcaacaaggtctccagcagt
ctgctcagcttcggtaggaagctcatcgcccctgctctgtcagggggtggctccagcggc
atctctccaattaatagcgaggtcctgtctgccccctcccccgtcactgtgggtcctcac
ccccaggccgagcccttgttgtctggccatgcacccctgcagacgcagacacccccccat
tcccagcaccaccgcttactcaagtctgagagtatgcctgtccacctgagcaaagtttca
ggaggagtctctcaggttcctgtcccagcccacattttctctgacacaaaaggccaaatc
tccaggacagctagctcctcccccagcatagagagcctctctggagggcggggtcacacc
actgcatccccaccccttcctgtcaccagggaaagtgacaccagcacgtcgtcttcgccc
ctctcggccaccaggaaggattccttcttcaacatcactcgctcccgctcccacagcaag
accatgatgggcaagaaagaggctgaggaggagttggaggcccaggtgtccttcctgcag
ggtcagatcaatgacctggaggccatgagcaagtactgtgccaagatgatgaacacacat
attggtaagatccaggaggtgatcctacaggagcacctggagaaagaagacgaggtgttg
gtgtcactggctggactcaaacagatcaaggacatcctgaagggagcgctgcgtttcaac
cagagcctgctggaggctgaggagaacgaggagatcaccatcgctgacgaccactatgac
atcacctccaatgccgctgcagccatcgtagaacagctcgccaactgtcaccatgacaaa
caccccttccaggccacaccgcagcgtggcgacggtgatggagaacagaaggaccgagag
gaggaagagcatgagcacacagagtcagagcaacaggtgtctcccccagagtcatctctg
tctgtgggttcggaggggaagaactggggcgactacatcctggtctcgcaggacggagag
ctgcagcccaccgagggaggggccgagaggacccctccaatcagactgctccgtggctcg
ctcagggtggagccggagggcgtgggggtgttccaggaccccctaatgggtgcagcgtct
ggctcctccagcccagacgagggcagcactcacagtaaagactatgacttcaccatcgtc
aacccccaggacctgtga

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