Oncorhynchus kisutch (coho salmon): 109907320
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Entry
109907320 CDS
T09179
Name
(RefSeq) CLIP-associating protein 2-like isoform X1
KO
K16578
CLIP-associating protein 1/2
Organism
oki
Oncorhynchus kisutch (coho salmon)
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
oki03036
]
109907320
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
oki04812
]
109907320
Chromosome and associated proteins [BR:
oki03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Microtubule-associated proteins
109907320
Cytoskeleton proteins [BR:
oki04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Cytoplasmic linker proteins (CLIPs)
CLIP-associating proteins
109907320
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CLASP_N
XMAP215_CLASP_TOG
HEAT_EF3_N
CEP104-like_TOG
HEAT
Cnd1
TOR1L1_N
ParcG
HEAT_DAAF5
IFRD
MMS19_C
TAN
Motif
Other DBs
NCBI-GeneID:
109907320
NCBI-ProteinID:
XP_031649082
Ensembl:
ENSOKIG00005011098
LinkDB
All DBs
Position
LG17:21492590..21574478
Genome browser
AA seq
1574 aa
AA seq
DB search
MEEHDNMDYFYQQVLQKDVTRRLQVGQDLIDYLNDPQRSTDVEQDKPRLDKTVDELTGWV
NSSNYKVALLGIDIAGAFVDRLGERFRGYLGTVVPALVDRLGDSKDQVREQSQTVILRCM
EVTASPMYVWERLLPGFKHKNFRSREGVCLVLCATLNTYGAQPLSLSKIVPYLCTLTGDQ
NPQVREAATASLVDVYRHIGERVRADLGKRGLPATRLQTIYGRFDEALNSGNMALSPSHV
SQISIVLRPSPKRRQPRRIILRHNHSFEDDVDSTDGSRAQAAFKVPKIPKKPAESSTARR
PSATGPKIGGASKDGAGGIDEEDFIKAFTDVPTVQIYSSRDLEDNLNKIREICSDDKHDW
DQRAAAMKKIRSLIVAGATEYECFFQHLRLLDGAFKLSAKDLRSQVVREACITVAHLSTV
LGNKFDHGAEGILPILFNLIPNCAKVMATSGVSAIRFIIRHTHVPRLIPLITSNCTCKSV
AVRRKCFDFLDLLLQEWQTQTLERHTAVMVASIKKGIADADAEARVEARKAYWGLRNHFP
GEADSLFNSLEPSYQRSLQSSLRNAGSVASLPQSDRSSSSSQESLNRPLSSKWSAAPGRV
PAGHKGGASPGSLQRSRSDVDVNAATVAKQRHIGQVGAGRLTPGSYSSLDDASDKMDGAR
SVNGRLRTKQPLTTATSVSQVDSRGRTRTKMVSQSQRSDESDCTPGSQSATPIGAGSRSG
SPGRVLTSTALSTLGSGAQRVLAGAGGRRSRIPRSQGCSRDSSPTRLSVAPSSISSIYNG
ASRGARGSRIPRPSMSQGCSREASRESSRDTSPVRSFTPLASRHYSRSTGALHTADALGA
AGSGYSISQSSRLSSSVSAMRILNTGSDVEEALADALLLGDMRSKKKPARRRYENYGMYS
DDDANSDASSACSERSYSSRNGGAIPTYMRQTEDVAEVLNRCASANWSERKEGLLGLQAL
LKNQRTLSRVELKRLCEIFTRMFADPHSKRESGSRVYGTAESGISSASFKRVFSMFLETL
VDFVLVHREDLQDWLFVLLTQLLKKMGADLLGSVQAKVQRALDITRESFPNDLQFTILMR
FTVDQTQTPNLKVKVAVLKYIETLTLQMEPQDFVNSSETRLAVSRVITWTTEPKSSDVRK
AAQSVLISLFQLNTPEFTMLLAALPKTFQDGATKLLQNHLRNTGNAAQAPTGSPLTRHTP
RSPASWSSPLTSPTNTSQNTSSPSAFDYDTENMNSEDIYSSLRGVTEAIQNFSVRSQEDM
NEPVRRREGEEGGSAGADQVDGGRTALDNKTSLLNTPLLSSSPRGSRDPFTDSPFKHSVI
DTSLDESDQQTDDSSIDQSELVSELLKELSNHNERVEERKAALCELLKLIRENTLQVSWD
EHFKTILLLLLETLGDREHVIRALALRVLREILSRQPWRFKNYAELTIMKALEAHKDPHK
EVVRAAEETAAMLASSISPDQCIKVLCPIIQSADYPINLAAIKMQTKVIERVPHEGLVSM
LPEIVPGLIQGYDNSESSVRKACVFCLVALYAVIGEELKPHLNQLSGSKLKLLNLYIKRA
QSGSSGGEPPADSL
NT seq
4725 nt
NT seq
+upstream
nt +downstream
nt
atggaggaacatgacaacatggattatttttaccagcaggtcctgcagaaagacgttacc
cgcaggctgcaggttgggcaggacctcatagactacctgaacgacccgcagaggtccacc
gatgtggagcaagacaaaccacggctcgataaaactgtagatgagctgacgggatgggtc
aactccagcaactacaaggtggcgttgttggggatagacattgccggggcgtttgtcgat
cgcttgggggagcgcttcagaggatacctgggaacagtggtccctgcgttagtggaccgg
ttgggggacagtaaggaccaggtcagagaacagagtcagacggtcatcctccgctgtatg
gaagtcacagcatcgcctatgtatgtgtgggagaggttgcttcctggttttaaacataag
aatttccgcagcagagagggcgtgtgtctggttctctgcgccaccctcaacacgtatggt
gctcagcctttgagtctcagtaagatcgttccgtacctctgcactctgacaggagatcag
aacccacaggtgcgtgaggctgccacagcatcgctggtggatgtgtatcgccacatagga
gagagagtcagagccgaccttggaaagagaggcctgcctgccacacggttacagacaata
tacggccgttttgatgaagcgttgaattctgggaacatggcgctcagccccagtcacgtc
tcacagatttctatcgtattgcgtccatctccgaaaagaagacaaccaaggagaatcatc
cttcgtcataaccatagttttgaggatgatgtggacagtacagatgggagccgtgctcag
gctgccttcaaagtccccaaaatccccaagaagccggcagagtcctctactgcacgcaga
cccagcgctacaggacccaagatcggaggtgcgtctaaggatggagctgggggcatcgat
gaggaagacttcatcaaagccttcactgacgtccccacagtacagatctactcgtctcgt
gacctggaggataacctgaataagatcagagagatctgttctgatgacaaacatgactgg
gaccagagagccgctgcaatgaagaagatccgctcgctgattgttgccggggcaacggag
tacgagtgtttcttccaacacctgaggctgttggacggagcgttcaaactgtcagctaaa
gacctccgatcacaggtggtacgagaggcctgcatcactgtggcccacctgtcgacagtg
ttgggtaataagtttgaccatggtgctgagggcattcttcctatcctgttcaacctcatc
cctaactgtgccaaggttatggccacttcaggggtgtctgctatacgcttcatcatacgg
cacacacatgttcccagactcattcccctgatcaccagtaactgcacctgcaagtctgtg
gctgtcagaaggaaatgttttgacttcttggacctgctgctgcaggagtggcagacccag
actctggagagacatacagcagtgatggtagcgagcattaagaaggggattgcagatgcc
gacgcagaggccagagtagaggcccgcaaggcgtactggggtctgaggaaccattttccg
ggagaggcggactctctgttcaactcattagaaccgtcctatcagaggagcctccagtcg
tctctcaggaatgccgggagcgtggcgtctcttcctcagagtgaccgctcctcttcctct
tcacaggagagcctcaatcgtcctctgtcgtctaaatggtcagctgctcctggtagagtc
ccggctggtcataagggcggggcgtcgccaggctccctgcagcgttcccgtagcgatgtg
gatgttaatgcagcaacggttgctaagcagcggcacatcgggcaggtgggggcggggaga
ctgacccccggctcctactcgtcattggatgatgcctctgataaaatggatggggccagg
tcagtcaatggtcgtctgaggaccaagcagcctctcaccacggcgaccagcgtcagccag
gtggactcccggggacgcacccgcaccaagatggtgtcccagtcgcaacgttccgacgaa
tcagattgcacgccaggatctcagtctgctacccccattggtgccggcagtcggagtggt
tccccgggtcgcgtcctgaccagtaccgctctgagtactctgggttctggagcccagagg
gtcctagctggggctggagggagacgtagccgcatcccccgcagccagggctgctcacga
gactcctcccctacacgcctgtctgtcgctccctccagtattagttccatctacaacggc
gcaagcagaggagctcggggcagtcgtatcccccggccaagtatgagtcagggctgcagc
agggaggccagcagagagagcagcagagacaccagccctgtacgctcctttacacctctg
gcgtcgcggcactactctcgctccactggagctctccataccgccgacgctttaggggcc
gcagggtcagggtacagtatcagtcagtccagtcgtctgtcctcatccgtcagcgccatg
agaatcctcaacacaggatctgatgtagaagaggccctcgctgatgccttgctgttggga
gacatgagatccaagaagaagccagcgcggcggcgctatgagaattatgggatgtattcg
gatgatgatgctaacagtgatgcgtccagcgcctgctcagagcgctcctacagctccagg
aatggaggagccatccctacgtacatgagacagactgaagacgtggccgaggtgttgaac
cgctgtgccagtgccaactggtcagagaggaaggagggtctgctgggtctacaggctcta
ctgaagaaccaacgcaccctcagtcgtgtggagttgaagaggttgtgcgagatcttcacc
agaatgtttgcagacccccatagtaagcgagaatccggatctagggtctatggaacggca
gaatccggtataagctcagcctccttcaagagagtgttcagtatgttcttagagacccta
gtggactttgtcctggtgcacagagaagacctgcaggactggctgttcgtcctgctcacc
cagctgctgaagaagatgggagctgacctgctgggatcagtacaggccaaggtccagaga
gcactggacatcacacgagagtctttccccaacgacctccagttcactatcctcatgagg
ttcactgtggaccagactcagacaccaaacctcaaggtgaaggtggctgttctgaagtac
attgagaccttgaccctgcagatggagccgcaggactttgtgaactccagtgagacgcgc
ctggctgtgtctcgcgtcatcacctggaccacagagccaaagagctccgacgtcaggaag
gctgcccagtcggtgttgatctcgttgttccagttgaacactccagagttcaccatgctg
ctggcagctctgcccaagaccttccaggatggcgccaccaaactgctacagaaccacctg
aggaacacaggcaatgctgcacaggccccgacaggaagccctcttacacgccacaccccc
cgctctcctgccagctggtccagccccctcacctctcctaccaacacatcacagaacaca
tcctcacccagtgcatttgactacgacacagagaacatgaactcagaggacatctacagt
agtctgagaggagttacagaggccatccagaacttctccgtccgtagccaggaagacatg
aacgaaccggtcagacggagggaaggagaggagggtggtagtgctggtgctgaccaggtg
gatggaggtcgtacagctctggacaacaagacgtctctcctcaacacccccctgctctcc
tcttctccccgggggtcccgtgaccccttcactgactcccccttcaaacacagcgtcata
gatacttcactagacgaatcagaccagcaaactgacgacagcagcattgaccaatcagag
ctggtgtctgagctgctgaaggagctgtccaatcacaatgagcgtgtggaggagaggaag
gcagcgctttgtgagctcttgaagctgattcgagaaaacaccctgcaggtctcctgggat
gaacacttcaaaaccatcctcctgttactactggagacgctgggggacagagagcatgtg
atcagggcgttagctctgcgtgttctgagggagattctgagccgccagccctggaggttt
aagaactacgctgaactcaccatcatgaaggccctggaggcgcacaaggacccacacaaa
gaggtggtgcgagcggcagaggagactgcagccatgctggcgtcatccatcagtccagac
cagtgtatcaaggtgttgtgtcccatcatccagtcagctgactaccccatcaacctggct
gccatcaagatgcagactaaagttatagagagggtcccccatgaaggactagtcagcatg
ctgcctgagatagtccccggactcatacagggttatgacaactctgagagcagtgtgagg
aaggcctgtgtattctgtctggtggccctctacgcagtcataggggaggagctaaaacct
cacctcaaccaactgtctggcagcaaattgaagttgttgaatctgtacatcaagcgtgcc
cagtccggctccagtggtggtgagcccccagcagacagcctatag
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integrated database retrieval system
