Oncorhynchus kisutch (coho salmon): 109907343
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Entry
109907343 CDS
T09179
Name
(RefSeq) terminal nucleotidyltransferase 4A-like isoform X2
KO
K03514
non-canonical poly(A) RNA polymerase PAPD5/7 [EC:
2.7.7.19
]
Organism
oki
Oncorhynchus kisutch (coho salmon)
Pathway
oki03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
109907343
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oki03019
]
109907343
03016 Transfer RNA biogenesis [BR:
oki03016
]
109907343
Enzymes [BR:
oki01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
109907343
Messenger RNA biogenesis [BR:
oki03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
TRAMP complex
109907343
Transfer RNA biogenesis [BR:
oki03016
]
Eukaryotic type
tRNA degradation factors
TRAMP complex
109907343
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MTPAP-like_central
PAP_assoc
NTP_transf_2
Polbeta
TUTase
PAP_NTPase
DUF1685
Motif
Other DBs
NCBI-GeneID:
109907343
NCBI-ProteinID:
XP_020360838
Ensembl:
ENSOKIG00005010459
LinkDB
All DBs
Position
LG17:complement(22749269..22773733)
Genome browser
AA seq
763 aa
AA seq
DB search
MDPRVAWNQPEQKGPANASWMRIWEISQVRATSGQHHNNQNHNLCVNYPALDVYKNVAAS
SNSINTTASLSSSHHCISNRTTNHGTSFSSFGSTLPKGNVQNILTPSKANGNSVTTDLLG
NSGMPQKTESGTDSPSSNCSLGRTCGGNVTGNSNKSPGCANLFFSFSESMHNNVNQFHHH
QRHHQDHPQYNFQHNCVKRHPPSPLNNHTHHPGRRKSDNKASTYGINYLLSNWTNDNHVS
SGTGTPWKTRKYSPGVDGLHEEVVDFYNFMSPQPEEASMRKEVVNRIETVIKELWPTADV
QIFGSFSTGLYLPTSDIDLVVFGKWERPPLQQLEQALRKHNVAEPFSIKVLDKATVPIIK
LTDQETDVKVDISFNVETGVKAALFIKDYTKRYPVLPYLIFVLKQFLLQRDLNEVFTGGI
SSYSLILMVISFLQLHPRIDASSPNINLGILLIEFFELYGRHFNYLKTGIRVKNGGAYMA
KEDMTKVMTNGYRPSMLCIEDPLMPGNDVGRSSYGAMQVKQVFDYAYIVLGHAVSPLARS
YPNKDIDSTLGRIIKVTQEVIDYREWIMTKWGGRHLARMESRGSVLEQDPARCVLGVGVE
EQRDSVSPHSADSPMSLSSPHQHSSASSVSSLSGSDNDSDSTPCPGRPPALPPYTLQSLG
MTLPLGLALGKTGINQQHLIMSPGSQACMSLPSGLTMHSLPVRQNGPKFHVKGFHNPAVV
HSPALANRAHTHPLTHAHTHSHTQYRNTWRRRKRDSLPVSLSR
NT seq
2292 nt
NT seq
+upstream
nt +downstream
nt
atggatccgagggtggcttggaatcagcccgagcagaaaggacctgcgaacgcatcatgg
atgcgaatctgggagatttctcaggtacgagcgacctccggtcaacatcataataatcag
aaccacaacctgtgtgtgaattatccagcgttggacgtttataaaaatgttgcggcatcg
agcaatagcattaacaccactgctagtctgagcagcagccatcactgtatttcaaaccgt
actactaatcacggcacttcattttcctccttcgggtcaacgttacccaaaggcaacgta
cagaacatattgactccgtccaaagcgaacggtaacagtgtaacgacagatttgttggga
aacagtggaatgccccaaaagacggaatctggaacggacagtccatcttcgaactgctcg
ttgggaaggacttgcggtggcaatgtaacgggaaatagtaataaaagccctggatgtgcc
aatctgttttttagcttcagcgaaagcatgcataataatgtcaaccaattccaccaccat
caaaggcatcatcaggatcacccccagtacaatttccaacataattgtgtgaagcgtcac
ccaccatcacccttaaataaccacactcaccatccaggccgaaggaaaagtgacaacaag
gcgagcacctatgggattaattacttgctttctaactggactaatgacaaccatgttagt
tcggggactggaactccttggaagacgaggaaatacagccccggtgttgatggtctccat
gaggaggtggtggacttctacaacttcatgtctccccaacccgaggaggcttctatgagg
aaggaggtggtcaacagaatcgagacggtcatcaaggagctgtggcctactgctgacgtg
cagatatttggcagcttcagcactggactctacctacccacaagtgacatagacctggtg
gtgtttgggaagtgggaacgcccccctctgcagcaattggaacaggccctccggaaacac
aacgtggcggaacctttctccatcaaagtgctggacaaagctacagtgccaatcatcaag
ctgactgaccaggagacagacgtcaaagtggacatcagcttcaatgtggagacgggagtc
aaagctgctctcttcatcaaggactacacaaagaggtatcccgtgctgccttacctgatc
tttgtgctgaagcaatttctgctccagagagatctcaacgaggtgttcactggaggaatc
agctcctacagcctcatcctgatggtcattagcttcctccagctccacccaagaattgac
gccagtagccccaacatcaaccttggcatcctgctgattgagttctttgagctgtacggc
cgccattttaattacctgaagacgggcatccgtgtcaagaacggaggggcctacatggcc
aaggaggacatgacgaaggttatgaccaacggctacagaccctccatgctctgtatagag
gacccactgatgccaggtaacgacgttggcaggagttcgtacggagccatgcaagtcaag
caggtgtttgactacgcttacatcgtccttggtcacgccgtgtcaccgctagcacgctcc
taccccaataaggacatcgacagcactttggggaggataatcaaggtgacccaggaagtg
attgactacagggagtggatcatgacgaagtggggaggaaggcacctcgcccgcatggag
agccgtggttctgtcctggagcaggacccggcacggtgtgtgttgggtgtaggtgtggag
gaacagagggactcagtctccccccacagtgcagactcccccatgtccctgtccagtcct
caccaacactcctcagcctcctcggtctcctctctgtccgggtcagacaatgactctgat
tcgacgccatgccctggccgccctccggcgctgcccccctacaccctccagtctctgggt
atgactctacccctgggcctggcactgggcaagactggcatcaaccagcagcacctcatc
atgtcccctggctcacaggcgtgtatgtctttgcccagtggcctgacgatgcactcctta
cctgtcagacagaatggtcctaagtttcacgtgaaaggcttccacaatccagctgtggtc
cacagtcccgccctggccaaccgcgcccacacgcaccctctcacacacgcccacacacac
tcacacacgcagtaccgcaacacctggcgccgtcggaagagggacagcctgccagtaagc
ctgagcagataa
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