Oncorhynchus kisutch (coho salmon): 109907483
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Entry
109907483 CDS
T09179
Name
(RefSeq) GA-binding protein subunit beta-1 isoform X1
KO
K09454
GA-binding protein transcription factor, beta
Organism
oki
Oncorhynchus kisutch (coho salmon)
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
oki03000
]
109907483
03029 Mitochondrial biogenesis [BR:
oki03029
]
109907483
Transcription factors [BR:
oki03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
RHR (Rel homology region) Ankyrin only
109907483
Mitochondrial biogenesis [BR:
oki03029
]
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Ubiquitas transcription factors
109907483
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ank_2
Ank
Ank_4
Ank_3
Ank_5
ANK_LRRK2
TC1
Motif
Other DBs
NCBI-GeneID:
109907483
NCBI-ProteinID:
XP_020361053
Ensembl:
ENSOKIG00005036192
LinkDB
All DBs
Position
LG17:32259561..32271012
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AA seq
415 aa
AA seq
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MVPVPNPCAEMSLVDLGKRLLEAARKGQDDEVRTLMANGAPFTTDWLGTSPLHLAAQHGH
YSTAEVLLRAGVSRDARTKVDRTPLHMAASEGHNVIVDLLVRSGADINAKDMLKMTALHW
AAQNGHQRVAETLVKHGADVHALSKFDKTPFDIAGDIQNADLMLLLQEGMQNQVNMNAEA
GMTGSSAQPQFIIQGIPGLPGGVVNLADLLNNINSAGDSEEAIAANSLDPGSIQHMVNEQ
GQRVITIVTDQHGNLQTGGLGQPFFVTMQHGQQMLAMPANQVTEEVVEEEPQPPPARKRK
LEASANHMESGDTEQLQRQLQEANRKAQEYRQQLMCKEQEAEQYRMKLEAMSYSHTNGTS
EQEEVVEEEEEEEEEEEEVVVLQEGDIIIKTEELDSAEEQVTLVESVPSHTEVIS
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
atggtaccagtaccgaatccatgtgcagagatgtcgctggtggatttggggaagcggctc
cttgaggctgcacggaaaggccaggatgatgaagtcaggacactcatggccaatggggct
cccttcaccacagactggctgggcacatctccgttgcacctggccgcccaacacgggcac
tattccactgccgaggtgctgctcagggcaggcgtcagcagggatgcccgaaccaaagtg
gacaggacccctctgcacatggctgcttcagagggccacaatgtcatcgtggatctatta
gtcaggagtggcgcagacattaatgccaaggacatgctgaagatgactgctctccactgg
gccgcccagaatggccaccaaagggtagcggagacgctcgtgaaacatggcgccgatgtt
cacgctctcagtaaatttgataagacgccgtttgacatcgcaggagacatccagaatgca
gaccttatgctcctactacaggagggaatgcagaaccaggtgaacatgaacgcagaggct
ggcatgactgggagctcggcccagcctcagtttatcatccagggcataccagggctcccg
gggggtgtggtcaacctggcagacctcctcaacaacatcaactcggcaggtgactcggag
gaagccatagcagccaattctttggaccccggcagcatccagcacatggtgaacgagcaa
ggtcaaagggttatcaccatagtgaccgaccaacacggtaacctacagactggagggctt
ggtcagccattctttgtcaccatgcagcatggacaacagatgttggcgatgccagccaat
caggtgacagaggaggtggttgaggaggaaccccagcccccgcctgcccgcaagaggaaa
ctagaggcctctgccaaccacatggagtctggagacacggagcagttacagaggcagctg
caggaggccaaccggaaggcccaggagtaccggcagcagctgatgtgcaaagagcaggaa
gcagagcagtaccgtatgaagctggaggccatgtcgtacagccataccaacggcacctct
gagcaggaggaagtggttgaggaggaggaggaggaggaggaggaggaggaggaggtggtg
gtgctccaggagggagacatcatcattaagacggaggagctggactcggccgaggagcag
gtgacgctggtggagtcggtgccctcccacaccgaggtcatctcataa
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