Oncorhynchus kisutch (coho salmon): 109907518
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Entry
109907518 CDS
T09179
Name
(RefSeq) E3 ubiquitin-protein ligase RING2-A-like isoform X1
KO
K10695
E3 ubiquitin-protein ligase RNF1/2 [EC:
2.3.2.27
]
Organism
oki
Oncorhynchus kisutch (coho salmon)
Pathway
oki03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
109907518
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
oki04121
]
109907518
03036 Chromosome and associated proteins [BR:
oki03036
]
109907518
Enzymes [BR:
oki01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
109907518
Ubiquitin system [BR:
oki04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
109907518
Chromosome and associated proteins [BR:
oki03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Canonical PRC1 (PRC1.2/1.4)
109907518
Noncanonical PRC1 (PRC1.1)
109907518
Noncanonical PRC1 (PRC1.3/1.5)
109907518
Noncanonical PRC1 (PRC1.6)
109907518
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RAWUL
zf-C3HC4_2
zf-C3HC4
zf-RING_2
zf-C3HC4_3
zf-RING_UBOX
zf-Nse
zf-C3HC4_4
zf-RING_6
zf-RING_4
zf-RING_5
RING_XB3-XBAT31
zf-rbx1
zf-UDP
DUF4653
TRAF3_RING
DUF6437
zf-C3HC4_5
Sina_RING
Motif
Other DBs
NCBI-GeneID:
109907518
NCBI-ProteinID:
XP_020361103
Ensembl:
ENSOKIG00005046917
LinkDB
All DBs
Position
LG17:complement(33462676..33466204)
Genome browser
AA seq
396 aa
AA seq
DB search
MEGSIKHKMATPVNIQNPSKTWELSLYELHRSPQEAIMDGTEIAVSPRSLHSELMCPICL
DMLKNTMTTKECLHRFCSDCIVTALRSGNKECPTCRKKLVSRRSLRRDSNFDALISKIYP
SRDEYEAHQDRVLERLNRLHNKQALSSSIEEGLRMQALHRAQRVRKPAQESDNTTFSGGE
DNGDARSHLSHDSAPSHAPLPPSHTPSEAGPSRNPKRPRVSDESGPEVDGGSPTAPLRHH
KEGPGSEIELVFRPHPLLVNTQDYSQTRYVKTTANATVDHLSKYLALRIALEERQRDSQS
DAAMEKGKEGVEVGAKGEKSAGGASLKNVSEKQYTIYITTSGGQFSTLNGSLTLELVNEK
YWKVRKPLELYYAPTKDQPLQPSQPPQQKSPQPKEG
NT seq
1191 nt
NT seq
+upstream
nt +downstream
nt
atggaggggtctataaaacacaaaatggcgactccagtcaacatccaaaaccccagtaag
acgtgggagctgagcttgtatgaactgcacaggagcccacaggaggcgatcatggacggc
acagagatagcggtgtccccccggagcctccacagtgagctgatgtgccccatctgtctg
gacatgttgaagaacacaatgaccaccaaggagtgcctgcaccgcttctgctccgactgc
atcgtcactgcactccgatcagggaacaaggaatgccccacgtgccgaaagaagcttgtg
tcgagacgctcgctccgccgcgactccaactttgacgccctcatctccaagatctacccc
agccgcgacgagtacgaggcccaccaggaccgggtgctggagagactcaaccggctgcac
aacaagcaggccctcagctccagcattgaggaggggctgcgcatgcaggctctgcacaga
gcccagcgagtgcgcaaaccggcgcaggagagcgacaacaccaccttcagcggcggcgag
gacaacggggatgcacggtcacacctctcccacgactctgcgccttcccacgcgcccctc
cccccgagccacacaccctctgaggccgggcccagccggaaccctaagcggcccagggtg
tcagatgagtcaggcccggaggtggatgggggcagccccacggccccgctccggcaccac
aaagagggccctggctcagagatagagctggttttccgtccgcaccccctgctggtcaac
acacaggactacagccagaccagatatgtgaagaccacagccaacgcgacagtggaccac
ctgtctaagtacctggctctgcgtatcgctctggaggagaggcaaagagacagccaatct
gatgcagcgatggagaaggggaaagagggagtggaggtgggggctaaaggagagaaatca
gcaggaggggccagcctgaagaacgtcagtgagaagcaatacaccatctacatcaccaca
tcagggggacagttctctactctgaacggctccctgactttagagctggtgaatgagaag
tactggaaggtcagaaagcctctggagctttactatgcccccaccaaggaccaacctctt
caaccatcacagccaccgcagcagaagtccccacagcccaaagaggggtga
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