Oncorhynchus kisutch (coho salmon): 109907531
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Entry
109907531 CDS
T09179
Name
(RefSeq) tapasin isoform X2
KO
K08058
TAP binding protein (tapasin)
Organism
oki
Oncorhynchus kisutch (coho salmon)
Pathway
oki05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
109907531
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Gene cluster
GFIT
Motif
Pfam:
V-set
Ig_3
ig
I-set
Ig_2
C1-set
Motif
Other DBs
NCBI-GeneID:
109907531
NCBI-ProteinID:
XP_020361139
Ensembl:
ENSOKIG00005048300
UniProt:
A0A8C7L982
LinkDB
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Position
LG17:33792421..33797306
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AA seq
442 aa
AA seq
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MANISTIYKLSFLAFTYFIQVYGTSCPVLECWFVQEKPGRGGGFPAAMIQEKALLYINTD
PESEQTKSQQRPSADISHDRVYYITDPAAILCSSSLHPPEGSVHKPQCEINPFMTQPSTV
QWAVPLTDSAHSPIYLQADWYSAALQGLDGQLALSSVMRAPTATKEPTVVLSVSSRTPLV
RSRLGEPVVLDCGFWAEASSPLSGSGFAVEWRYQFRGDGRLVLAYDGKTDRFAETKEKGA
GLDFTALHETGNASLILQEAEVRHTGTYICTAYLPYLLAQVAVELEIVEPPSLSIFPSPL
PLSVPGQVVKVQCEASGFFPLSLEFYWELTGPDGKVRPLGQGSVTGHRQGPDNTYSQTTR
LELDSAKLDLGRGGEVTCVAVHPGGTRRASVTLNVIGVNGPSIEDSMAMVAVALGLYGLI
KIVSWTFSSGSDDTNSQEKKVK
NT seq
1329 nt
NT seq
+upstream
nt +downstream
nt
atggccaatatttcaacaatttacaagctatcgtttctcgcctttacttacttcatacaa
gtctatgggaccagctgtccagttctggagtgctggtttgtccaggagaaaccaggtcga
ggtgggggattccctgctgcaatgattcaggagaaggcactgctgtatatcaatacagac
ccagagagtgaacaaaccaagtcacagcagagaccatctgcagacatcagccatgataga
gtctactacatcactgacccagcagccatcctctgcagttcctctctgcacccaccagag
ggctcagtccataaaccacagtgtgagataaaccccttcatgacccagccctccaccgtt
caatgggcagtcccgctcactgactctgcccacagtcctatctacctgcaagctgactgg
tactctgcagccttgcagggcctggacggacagctggccctgtccagtgtcatgcgtgct
cccacggcaaccaaggaacccactgtggtgctcagtgtgtccagtcgaacccccttggtc
cgttccagactcggggaaccggtggttctagactgtgggttctgggcggaggcctcttct
cctctctctggctcgggcttcgccgtggagtggcgctaccagttcaggggcgatggccgt
ctggtcctggcctacgacggcaagactgaccgatttgccgagaccaaggaaaagggagcg
gggctagacttcacggctctgcacgagacaggaaatgcctcactgatcctgcaggaagct
gaagtgcgccacacagggacctacatctgcacggcgtacttgccctatctcctggctcag
gtggcagtggagctggagattgtagagcctccgtccctctccatcttcccctccccgctc
cctctctccgtgcccggacaggtggtgaaggtgcaatgcgaggcgtcaggattcttcccc
ctctccctggagttctactgggagttaacagggcctgacggcaaggtcaggcccctgggt
cagggcagcgtgacaggccacaggcagggcccagacaacacctacagccagaccacccgt
ctggagttagactcagccaagctggaccttggccgtgggggggaggtcacatgtgtggcc
gtccatcctggaggcacccggcgggccagcgtcaccctcaatgtcatcggtgttaatggt
ccctccattgaagactccatggcgatggttgccgtggccctggggctctatggtttaatc
aagatcgtctcctggacatttagctctgggtccgatgatactaactcacaagagaagaaa
gtgaagtaa
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