Oncorhynchus kisutch (coho salmon): 109907589
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Entry
109907589 CDS
T09179
Name
(RefSeq) elongation factor 1-alpha
KO
K03231
elongation factor 1-alpha
Organism
oki
Oncorhynchus kisutch (coho salmon)
Pathway
oki03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
109907589
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oki03019
]
109907589
03016 Transfer RNA biogenesis [BR:
oki03016
]
109907589
03012 Translation factors [BR:
oki03012
]
109907589
04131 Membrane trafficking [BR:
oki04131
]
109907589
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
oki04147
]
109907589
Messenger RNA biogenesis [BR:
oki03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
109907589
Transfer RNA biogenesis [BR:
oki03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
109907589
Translation factors [BR:
oki03012
]
Eukaryotic type
Elongation factors
109907589
Membrane trafficking [BR:
oki04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Other CMA associated proteins
109907589
Exosome [BR:
oki04147
]
Exosomal proteins
Proteins found in most exosomes
109907589
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
GTP_EFTU_D2
MMR_HSR1
GTP_EFTU_D4
Gtr1_RagA
Motif
Other DBs
NCBI-GeneID:
109907589
NCBI-ProteinID:
XP_031649611
Ensembl:
ENSOKIG00005048282
LinkDB
All DBs
Position
LG17:complement(35962159..35966006)
Genome browser
AA seq
462 aa
AA seq
DB search
MGKEKIHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAAEMGKGSFKYAWVL
DKLKAERERGITIDISLWKFETAKYYVTIIDAPGHRDFIKNMITGTSQADCAVLVVAGGV
GEFEAGISKNGQTREHALLAYTLGVKQLIVGVNKMDSTEPPYSQKRFEEIQKEVSTYIKK
IGYNPATVAFVPISGWHGDNMLEASPNMGWFKGWKVERKEGGANGVTLLEALDSILPPSR
PTNKPLRLPLQDVYKIGGIGTVPVGRVETGTLKAGMIVTFAPANVTTEVKSVEMHHETLE
AALPGDNVGFNVKNVSVKDIRRGNVAGDSKNDPPMEAGNFTAQVIILNHPGTISQGYAPV
LDCHTAHIACKFSELKEKIDRRSGKKLEDNPKALKSGDAAIIVMVPGKPMCVESFAAYPP
LGRFAVRDMRQTVAVGVIKAVDKKAASTGKVTKSAVKAAKAK
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
atgggaaaggaaaagatccacatcaacatcgtggtcattggccatgtcgactccgggaag
tccaccaccaccggccatctgatctacaaatgcggaggcattgacaagagaactattgag
aagttcgagaaggaggctgctgagatgggcaaaggctctttcaagtatgcctgggtgctg
gacaagctgaaggctgagcgagagcgtggtatcaccatcgacatttccctgtggaagttt
gagaccgccaagtactacgtcacaatcattgatgcccccggacacagagacttcatcaag
aacatgatcactggtacctctcaggctgattgtgctgtgctggtcgttgctggtggtgtt
ggtgagtttgaggccggtatctcaaagaacgggcagactcgtgagcacgctctcctggcc
tacactctgggagtgaagcagctcatcgttggtgtcaacaagatggactccacagagccc
ccctacagccagaagcgttttgaggagatccagaaggaggtcagcacctacatcaagaag
atcggctataaccctgccaccgtcgcctttgtgcccatctctggatggcatggggacaac
atgctggaagccagccctaacatgggctggttcaagggatggaaggttgagcgtaaggag
ggtggcgctaatggtgtgacccttctggaggctctggactctatcctgcccccctcccgc
cccaccaacaagcctctccgtctgcccctgcaggacgtctacaaaattggaggtattgga
acagtgcccgtgggccgtgtggagactggaaccctgaaggccggtatgatcgtcaccttc
gcccccgctaacgtcaccactgaagtcaagtctgtggaaatgcaccacgagaccctggaa
gcggctctccccggtgacaacgtcggattcaacgtcaagaacgtgtccgtcaaggatatc
cgtcgtggcaacgtagctggagacagcaagaacgaccctccaatggaggccggcaacttc
accgctcaggtcatcatcctgaaccacccgggcaccatctcccagggctatgcccccgtg
ctggattgccataccgctcacatcgcctgcaagttcagcgagctcaaggagaagatcgac
cgtcgttccggcaagaagcttgaggacaaccccaaggccttgaagtctggagacgccgcc
atcatcgtcatggtgccaggaaagcccatgtgtgtggagagcttcgccgcctaccctccc
ctcggtcgttttgccgtgcgtgacatgaggcagaccgtggctgttggtgtcatcaaggcc
gtcgacaagaaggctgccagcactggcaaggtgaccaagtccgccgttaaggctgccaaa
gccaaatga
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