KEGG   Oncorhynchus kisutch (coho salmon): 109907589
Entry
109907589         CDS       T09179                                 
Name
(RefSeq) elongation factor 1-alpha
  KO
K03231  elongation factor 1-alpha
Organism
oki  Oncorhynchus kisutch (coho salmon)
Pathway
oki03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:oki00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    109907589
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:oki03019]
    109907589
   03016 Transfer RNA biogenesis [BR:oki03016]
    109907589
   03012 Translation factors [BR:oki03012]
    109907589
   04131 Membrane trafficking [BR:oki04131]
    109907589
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:oki04147]
    109907589
Messenger RNA biogenesis [BR:oki03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Factors involved in mRNA localization
    Trans-acting binding proteins
     109907589
Transfer RNA biogenesis [BR:oki03016]
 Eukaryotic type
  tRNA transport factors
   tRNA export factors
    109907589
Translation factors [BR:oki03012]
 Eukaryotic type
  Elongation factors
   109907589
Membrane trafficking [BR:oki04131]
 Autophagy
  Chaperone mediated autophagy (CMA)
   Other CMA associated proteins
    109907589
Exosome [BR:oki04147]
 Exosomal proteins
  Proteins found in most exosomes
   109907589
SSDB
Motif
Pfam: GTP_EFTU GTP-eEF1A_C GTP_EFTU_D3 GTP_EFTU_D2 MMR_HSR1 GTP_EFTU_D4 Gtr1_RagA
Other DBs
NCBI-GeneID: 109907589
NCBI-ProteinID: XP_031649611
Ensembl: ENSOKIG00005048282
LinkDB
Position
LG17:complement(35962159..35966006)
AA seq 462 aa
MGKEKIHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAAEMGKGSFKYAWVL
DKLKAERERGITIDISLWKFETAKYYVTIIDAPGHRDFIKNMITGTSQADCAVLVVAGGV
GEFEAGISKNGQTREHALLAYTLGVKQLIVGVNKMDSTEPPYSQKRFEEIQKEVSTYIKK
IGYNPATVAFVPISGWHGDNMLEASPNMGWFKGWKVERKEGGANGVTLLEALDSILPPSR
PTNKPLRLPLQDVYKIGGIGTVPVGRVETGTLKAGMIVTFAPANVTTEVKSVEMHHETLE
AALPGDNVGFNVKNVSVKDIRRGNVAGDSKNDPPMEAGNFTAQVIILNHPGTISQGYAPV
LDCHTAHIACKFSELKEKIDRRSGKKLEDNPKALKSGDAAIIVMVPGKPMCVESFAAYPP
LGRFAVRDMRQTVAVGVIKAVDKKAASTGKVTKSAVKAAKAK
NT seq 1389 nt   +upstreamnt  +downstreamnt
atgggaaaggaaaagatccacatcaacatcgtggtcattggccatgtcgactccgggaag
tccaccaccaccggccatctgatctacaaatgcggaggcattgacaagagaactattgag
aagttcgagaaggaggctgctgagatgggcaaaggctctttcaagtatgcctgggtgctg
gacaagctgaaggctgagcgagagcgtggtatcaccatcgacatttccctgtggaagttt
gagaccgccaagtactacgtcacaatcattgatgcccccggacacagagacttcatcaag
aacatgatcactggtacctctcaggctgattgtgctgtgctggtcgttgctggtggtgtt
ggtgagtttgaggccggtatctcaaagaacgggcagactcgtgagcacgctctcctggcc
tacactctgggagtgaagcagctcatcgttggtgtcaacaagatggactccacagagccc
ccctacagccagaagcgttttgaggagatccagaaggaggtcagcacctacatcaagaag
atcggctataaccctgccaccgtcgcctttgtgcccatctctggatggcatggggacaac
atgctggaagccagccctaacatgggctggttcaagggatggaaggttgagcgtaaggag
ggtggcgctaatggtgtgacccttctggaggctctggactctatcctgcccccctcccgc
cccaccaacaagcctctccgtctgcccctgcaggacgtctacaaaattggaggtattgga
acagtgcccgtgggccgtgtggagactggaaccctgaaggccggtatgatcgtcaccttc
gcccccgctaacgtcaccactgaagtcaagtctgtggaaatgcaccacgagaccctggaa
gcggctctccccggtgacaacgtcggattcaacgtcaagaacgtgtccgtcaaggatatc
cgtcgtggcaacgtagctggagacagcaagaacgaccctccaatggaggccggcaacttc
accgctcaggtcatcatcctgaaccacccgggcaccatctcccagggctatgcccccgtg
ctggattgccataccgctcacatcgcctgcaagttcagcgagctcaaggagaagatcgac
cgtcgttccggcaagaagcttgaggacaaccccaaggccttgaagtctggagacgccgcc
atcatcgtcatggtgccaggaaagcccatgtgtgtggagagcttcgccgcctaccctccc
ctcggtcgttttgccgtgcgtgacatgaggcagaccgtggctgttggtgtcatcaaggcc
gtcgacaagaaggctgccagcactggcaaggtgaccaagtccgccgttaaggctgccaaa
gccaaatga

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