Oncorhynchus kisutch (coho salmon): 109907617 Help Entry 109907617         CDS       T09179                                  Name (RefSeq) helicase SKI2W-like   KO K12599   antiviral helicase SKI2 [EC:5.6.2.6] Organism oki  Oncorhynchus kisutch (coho salmon) Pathway oki03018   RNA degradation Brite KEGG Orthology (KO) [BR:oki00001]  09120 Genetic Information Processing   09123 Folding, sorting and degradation    03018 RNA degradation     109907617  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:oki03019]     109907617 Enzymes [BR:oki01000]  5. Isomerases   5.6  Isomerases altering macromolecular conformation    5.6.2  Enzymes altering nucleic acid conformation     5.6.2.6  RNA 3'-5' helicase      109907617 Messenger RNA biogenesis [BR:oki03019]  Eukaryotic type   mRNA surveillance and transport factors    Transport factors     eIF4F and regulatory proteins      109907617   mRNA degradation factors    3'-5' decay     Ski complex      109907617 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  DSHCT Ski2_N DEAD MTR4_beta-barrel Helicase_C DEXQc_Suv3 ResIII MTR4-like_stalk HTH_23 DUF3516 Motif Other DBs NCBI-GeneID:  109907617 NCBI-ProteinID:  XP_020361282 Ensembl:  ENSOKIG00005017068 LinkDB All DBs Position LG17:37861372..37917344 Genome browser AA seq 1250 aa AA seqDB search MERIDLPPVGPTDLPLSLLEMGCSGRFELITHPQPNDQPLYPQSTLPHGLPPTSVGLETE VEKRFLRDPAWLPIHDTDAAFHRFLKLAERDVRVDSLLHCSSSPLHSGISVVRDPTTGML LDFTEVLLGDTGISAKNSMSLQRPPNPNPSESLRGSNTNYPFLPGGMDELTLEQIKTKSE LEEDIDFENGLLTVPPGLKVGMDFSDKDAKTTKGEINLLSLLSTFDDIIDSQPEAEEKEK GLGSGNAPKLPRTNSLEDLGIKDSPSTPGTPSTEKKDGGTTKPGEGHEERKRWAIPVDIT SPCDDFYKRIPNPAFKYPFELDMFQKQAVLRLEAHESVFVAAHTSAGKTVVAEYAIALSQ KHMTRTIYTSPIKALSNQKFRDFKTTFGDVGLLTGDVQLSPEASCLIMTTEILRSMLYNG SEVIRDLEWVIFDEVHYINDAERGVVWEEVLIMLPDHVSIILLSATVPNAVEFSEWIGRI KKKHIYVISTAKRPVPLEHYLYTGNSTKTQKEMFLLLDPTGNFQTKGYYSAIDAKKERTS KHAQSFGTKNASQKTTPNQDRAVWLSLLHFLSQRQQTPVVAFTFSRTRCDDNARSLASMD LTSSGEKSDIHSFFQKSLSRLRGGDRQLPQILLMRDLLKRGIAVHHSGILPILKEVIEML FSRGLVKVLFATETFAMGVNMPARTVVFDSIRKHDGTGFRNLLPGEYIQMAGRAGRRGLD ATGTVIILCKSGVHDMGELHVMMLGKPTVLQSQFRLTYTMILNLLRVEALRVTDMMRRSF SESHRDTQAHEQQIGQLKQTLSSLPPLDTEGQLSDLLPYYYTVTELRITAEALQCAVLGS VNGLKALSVGRVVVVNNKQHFNALGVLLQVSSDSVNRTFTALVICEKGNEEGGGDSPNAS AFPHLYNTALFLPDGPCSHTVQKLKLQDVSAITVKTLKVIPDRIIDNYNKRQQPRFRLDP PGQAISTATQELLRLAEANPGGVVTLDAVNDLQLKSVDVVEGTMRLRLLQDSLKDFNCIH SPTFSEQFLRVQERMSVQEELDKLLFLVSDQSLSLLPEYHQRIKVLQSLQYVDNSGAVQL KGRVACQISSHELLLTELLFENALSPLAPEESAALLSCLVFQQKTQVEPHITNTLQEGIE RVLAVAQRIGELQRDCGITQTAEEFVGQFKFGLTEVVYCWARGMPFAEIAQLTDVQEGTV VRCIQRLDEVLKEVRQAARIVGDSVLGSKMEKASLAIRRDIVFTASLYTH NT seq 3753 nt NT seq  +upstreamnt  +downstreamnt atggaaagaatagatcttccccctgtgggccccacagatctcccgctatccctgctggag atgggttgctctggcaggtttgagctcatcacacatccacagcccaatgaccagcccctg tatccacaaagcacgctcccccatggactccctcccaccagtgtgggcctggagacagag gtagagaagcgcttcctacgcgaccctgcctggcttcccatacacgataccgatgctgcc ttccacaggtttctgaagctggctgagcgagacgttcgtgtggactctcttcttcattgc tcttcgtctcctctccactctggcatctcagtagtcagagatccaacgacaggaatgctt ttggacttcactgaggtgttactgggggacacaggcatctctgctaagaattcaatgtcc ctgcagcgtccaccaaaccctaatccctctgagagcctccgaggaagcaacaccaactac ccctttctgcccggtggtatggacgagctgacactggagcaaatcaagacgaaatccgag ctggaggaagacatagactttgagaacgggttactcacagtgccccctggacttaaagtt gggatggacttcagtgacaaagatgccaaaaccacaaagggagaaatcaatctcctgtcc ctcctatccacctttgatgacatcatagactcccagcctgaggcagaggagaaagagaaa ggactcggaagcggaaatgctccaaaactacccagaaccaacagcctggaagacctgggg atcaaggactctccctctacacctgggaccccctcgacagagaagaaagatggaggaacg accaaaccaggagagggccacgaggagaggaagagatgggctatcccagtagacatcacc tccccttgcgatgacttctacaaacgcatccccaaccctgccttcaagtatccctttgag ttggacatgttccagaaacaggcagtgttgaggctggaggcccatgagtctgtgtttgtg gcagctcacacatcagcaggcaaaaccgtggtggcagaatacgccatagctctctcacaa aaacacatgaccaggaccatctacacctcccccatcaaggcgctgtccaatcagaagttc cgggacttcaagaccacctttggggatgtggggctgctgactggggatgtccagctgagt cctgaagcctcctgtctcatcatgaccactgagatattgaggtccatgctctataacggt tcagaggtcatcagagatttagagtgggtgatctttgacgaagttcactacatcaatgat gctgagagaggagtggtgtgggaggaggttctgatcatgttacctgaccacgtcagcatt attctgctgagtgccactgtccccaacgctgtggagttcagtgagtggatcgggcgcatt aagaagaagcacatctatgtgatcagcacagcgaagagacctgtgcctctggagcactac ctgtacacaggcaacagtaccaagacccagaaagagatgttcctactgctggaccctaca ggcaacttccaaaccaaagggtactattctgcaatagatgccaaaaaggaacgcaccagt aaacacgcccagtcctttgggacgaaaaatgcatctcagaagactacacccaaccaggac cgggcggtgtggctttccctcctccacttcctgtcccagcgccagcagacccccgtcgtg gcgttcaccttctccaggacgcgctgcgatgacaacgcccgctctctagcctccatggac ctcaccagctcgggggagaagagcgacatccactccttcttccagaagagtctgagccgc ctcaggggaggggaccgccagctgccccagatcctgttgatgagggacctgctgaagagg gggatcgccgtgcatcacagcggcatcctgccaatcctaaaggaggtaattgagatgctg ttctcacgggggctagtaaaggttctgtttgccactgagacgtttgctatgggagtgaat atgcccgcgaggacagttgtgtttgacagcatacggaaacacgatggtaccggcttccga aacctgctgcctggtgagtatatccaaatggctggtagagctggtaggagaggtctggat gccacaggcactgtcatcatcctatgcaagtcaggggtacatgatatgggagaactacat gtcatgatgctggggaagcccacagtgctgcagtcccagttcaggctgacctacaccatg attctcaacctgctgcgtgtggaggccctccgagttaccgacatgatgaggaggagcttc tctgagagccacagagacacacaggcccatgagcagcagatcggtcagttgaaacagact ctgtcctctcttcctcctctggacacggagggtcagctgtctgacctactgccgtactac tacactgtcactgagctacgcatcaccgctgaggcgctgcagtgtgcagttctggggtcc gtgaatgggttgaaggctctctctgtgggacgagtggtagtggtcaacaacaaacagcac ttcaacgcccttggagtcctcctacaggtgtccagcgactcagtgaatcgtacgtttacc gctctcgtcatctgtgagaaaggcaacgaggagggaggaggggacagccccaacgccagt gccttcccccacctctacaacactgccctctttctacctgatggtccctgcagtcacacg gtccagaagctgaagctacaggacgtgtcagccatcacagtcaagaccctgaaggtgatc cctgaccgaatcattgacaactataacaagaggcagcagccgcgcttcaggcttgatcct ccgggccaagccatctccacggcaacccaggagctcctgcgattggcggaggccaaccca ggcggggtggtgacccttgacgcggtgaatgacctccagctgaagagtgtggatgtggtg gagggcaccatgaggctgcgcttgctgcaggacagcctcaaagacttcaactgcatccac tcacccaccttctcagaacagtttctgcgggtgcaggagaggatgagtgttcaggaggag ctggacaaactgctcttcctcgtctcagatcagtccctgtctctactgccagagtaccac cagagaatcaaggtgctccagtccctgcagtacgtggacaatagcggtgctgtgcagctg aagggcagggtggcctgccagatcagtagccatgagctgctcctcacagagctactgttt gagaacgccctgagtcccctggcccctgaggagagcgccgccctgctgtcctgtctggtc tttcaacagaagacccaggtggagccccacatcaccaacacactgcaggagggtattgag agagtgctggcagtggcccagcgtattggggaactgcagagggactgtgggataacccag acagctgaagaatttgtgggccagttcaagtttggcctgaccgaagtggtatactgctgg gccagaggcatgccatttgcagagattgcacagttaacagacgtccaggagggcacggtg gtgcgctgcatccagagactagacgaggtgctgaaggaggtgcgccaggcagcccgcatc gtgggagactcggtcctgggcagcaagatggagaaggcctccctggccattcgcagagac atcgtgttcactgcttcgctctacacacactga

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