Oncorhynchus kisutch (coho salmon): 109907689
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Entry
109907689 CDS
T09179
Name
(RefSeq) sorting nexin-27-like
KO
K17936
sorting nexin-27
Organism
oki
Oncorhynchus kisutch (coho salmon)
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oki04131
]
109907689
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
oki04990
]
109907689
Membrane trafficking [BR:
oki04131
]
Protein recycling
Others
Others
109907689
Domain-containing proteins not elsewhere classified [BR:
oki04990
]
Phox homology (PX) domain-containing proteins
Sorting nexins
109907689
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PX
PDZ
RA
PDZ_6
SNX17-27-31_F1_FERM
RA_2
PDZ_2
SNX17_FERM_C
USP7_C2
Beta-prop_CATSPERE
DarA_N
TetR_C_26
Motif
Other DBs
NCBI-GeneID:
109907689
NCBI-ProteinID:
XP_020361395
Ensembl:
ENSOKIG00005020457
LinkDB
All DBs
Position
LG17:complement(42002872..42044770)
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AA seq
564 aa
AA seq
DB search
MADVEGDEIRSALLSASSNGPAAGSVVGTGGQNATQVTSGPRMVRIVKSESGYGFNVRGQ
VSEGGQLRSINGELYAPLQHVSAVLPGGAADRAGISKGDRILEVNGVSVEGATHKQVVDL
IRTGERELVLSVLSVPPQEADCLEAGDESAAQLSYDYSDKQAVPISIPTFKHVEQHAERF
VVYNVYMSGRQLCSKRYREFAILNQNLKREFASYIFPKIPGKWPFSLSEQQLDARRRGLE
EYLERVCSVRVIGESDIMQEFLSESDENYNGVSDVELRIALPDKTTISVRVRKNSTTDQV
YQALVMKVGMDSIMASYFALFEVINHSFVRKLAPNEFPHKLYVQNYTSAVPGTCLALRKW
LFTSQEEELLRDKPLAVHYCFHQALDDVKKGFIKTEDKSYQLTKLAEQRKMAMYLSLLRS
CEGYNEVMFPHCSCDSRRKGHVITAISMHHFKLHACTEDGTLENQVISFEWAEMQRWDTD
EEGMAFCFEYARGEKKPRWVKIFTPYFNYMHECFERVFCELKWRKQIEKEASDKDNQNCS
NNEYLPALETQKGWRHLGGEITTS
NT seq
1695 nt
NT seq
+upstream
nt +downstream
nt
atggcggatgttgaaggcgatgaaattcggtcggctctcctttcggcttccagtaatgga
cccgctgcaggttcggtagtcggtaccggaggccaaaatgctacccaggtgacgtcaggt
ccacggatggttagaattgtaaagtcggaatcaggatatggattcaacgttcgtggacaa
gttagcgaaggaggacaactgcgaagcattaatggggaattgtacgcccctcttcagcat
gtcagtgctgttttgcctggaggggctgcggaccgagctggcatatcaaagggtgatagg
attcttgaggttaatggagtgagtgtggagggggccacccacaagcaggtggtggatctg
atccggaccggagagagggagctggtgctgtccgtgctgtctgtgcctccccaggaggca
gactgcctggaggccggggatgagagcgcggcccagctcagctacgactacagcgacaag
caggccgtacccatctccatccccaccttcaagcacgtggagcagcacgccgagaggttt
gtggtgtacaacgtgtacatgtcgggcaggcagttgtgctccaagcgttaccgagagttt
gctatcctgaaccagaacctgaagagggagtttgccagctacatcttccccaagataccc
gggaagtggcccttctccctgtctgagcagcagctggacgcacgccgcaggggcctggag
gagtatctggaaagagtttgttctgtgcgggtgattggggagagtgacatcatgcaggaa
ttcctgtctgaatcagatgagaattacaatggtgtgtcagacgtggagttgcggatagcc
ctgccagacaagaccaccatctcggtcagggtgcgcaagaacagcacgactgaccaagtc
taccaggctttagtgatgaaggttggtatggacagcatcatggccagctactttgccctc
tttgaagtcatcaaccactcctttgtgagaaaactggcccccaacgagttcccccacaag
ttgtatgtgcagaactacacatcggccgtgccgggtacctgtctggccctccgcaagtgg
ctcttcacctctcaggaggaggagctgctcagggacaaacctctggccgttcactactgc
ttccaccaggcattggatgacgtgaagaagggattcatcaaaacagaagacaagtcttac
cagctgacaaaactggcagagcagcgcaagatggccatgtatctgagtctgctacgctcc
tgtgagggatacaatgaggtcatgttcccccactgctcctgtgactcccggaggaagggc
cacgtcatcacggccatcagcatgcaccacttcaagctgcacgcctgcacagaggatggc
acgcttgagaaccaggtgatatcgtttgagtgggcggagatgcagcgctgggacaccgat
gaggagggcatggcgttctgctttgagtacgccaggggggagaagaaacctcgctgggtc
aagatcttcacaccatacttcaactacatgcacgaatgcttcgagagggtcttctgtgag
ctcaagtggaggaaacagattgaaaaagaggcctctgacaaagacaaccagaactgcagt
aacaatgaatatctccctgctctggagacacagaagggatggcgccatctagggggcgag
atcaccacatcctaa
DBGET
integrated database retrieval system