Oncorhynchus kisutch (coho salmon): 109907730
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Entry
109907730 CDS
T09179
Name
(RefSeq) RNA-binding protein 39 isoform X1
KO
K13091
RNA-binding protein 23/39
Organism
oki
Oncorhynchus kisutch (coho salmon)
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
oki03041
]
109907730
Spliceosome [BR:
oki03041
]
Common components
Common spliceosomal components
General mRNP proteins
109907730
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RBM39linker
RRM_occluded
RRM_7
RRM_5
Motif
Other DBs
NCBI-GeneID:
109907730
NCBI-ProteinID:
XP_020361479
Ensembl:
ENSOKIG00005032574
UniProt:
A0A8C7IMW4
LinkDB
All DBs
Position
LG17:complement(44219089..44244781)
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AA seq
533 aa
AA seq
DB search
MADDFDVEAMLEAPYKKDKKSFILEHPIYHLFGCNKDEIKSSSANGNEERSSKKKKRSHR
RSSRSLSSDKCYSKDGKKSLEKKRSHSKERRRSGSRSREHAGRYRGCRGPFWKRSRSCSP
FKKDKSPVRKPIDNLTPEERDAHTVFCMQLAARIKPRDLEDFFSAVGKVRDVRMISDRNS
RRSKGIAYIEFLDVNSVPLAIGLTGQRLLGVPIIVQAPQAEKNRAAAMANNLQKGNAGPM
RLYVGSLHFNITEDMLRGVFEPFGRIESIQLMNDSETGRSKGYGFIAFADAECAKKALEQ
LNGFELAGRPMKVGHVTDRTDPSTASSFLDNDELERTGIDLGTTGRLQLMARLAEGTGLQ
IPPAAQQALQMSGSIHSTPIHFINMAAGTDIQASLNPPPEAPATLSLNLAPSMNQAMTLS
TQPLATHCLQLSNMFNPQLEKEPGWDVEIQDDVIEECNKHGGIVHIYLDKNCPQGNVYMK
CPTIPTAMAAVNALHGRWFAGKMITAAYVPFPTYHNLFPDSVTAAQLLMPVRQ
NT seq
1602 nt
NT seq
+upstream
nt +downstream
nt
atggcagacgactttgatgttgaggctatgctagaggctccatacaaaaaggacaaaaag
agcttcatcttagaacatcctatctatcacctgtttggttgcaacaaggatgaaataaag
tcctctagtgctaatggaaatgaagagcgcagtagtaagaagaaaaagaggagccatcgt
aggagtagtcgcagcctgagctctgacaagtgctacagcaaagatgggaagaagagtctg
gagaagaaacgcagccacagtaaagaacgccggcgcagtggttcccgtagcagggaacat
gctggacgctacagaggatgccggggccccttttggaaacgctcaagaagttgtagcccc
ttcaagaaagacaagagtccagtaaggaaaccaattgacaacctgaccccagaggagagg
gatgcccacactgttttttgtatgcagctggcagccagaatcaaaccacgggacctagag
gacttcttctcagctgtggggaaagtgagagacgtgaggatgatctctgacagaaactcc
aggaggtcaaagggcattgcctacattgagtttctggatgtgaattcagtcccgctggct
attggcttaactggtcagagacttctaggagtgcccatcatcgtacaggcccctcaggct
gagaagaacagagctgcagcaatggccaacaaccttcagaagggtaatgctggccctatg
cggctgtatgtgggctctctacacttcaacatcacagaggacatgctgcgaggtgtcttc
gagcctttcggaagaattgagagcatacaactgatgaatgacagtgaaactggacgatcc
aaaggatatggtttcatcgcatttgcagatgcagagtgcgctaagaaggccctggagcag
ctgaatggctttgagctggccgggcggcccatgaaagttggtcacgtgacggatcgcaca
gacccctccaccgccagttccttcctggacaacgacgagctggagaggacaggcattgac
ctgggcaccaccgggcgcctgcagctcatggcccggctggcagagggtactggtcttcag
atccccccggctgcacagcaggctctacagatgagtggttccatccactcgactccaatc
cacttcatcaacatggcagctggtacagacatacaagccagcctgaacccaccccctgaa
gctcctgccaccctttcactgaatctggctccaagcatgaaccaggccatgaccctctca
acgcagccactggctacgcactgcctacagctgtccaacatgttcaaccctcagttggaa
aaggaacctggctgggatgtcgagattcaagatgacgtcattgaggagtgcaacaaacac
ggtggaattgtccacatataccttgacaagaactgccctcagggcaacgtgtacatgaaa
tgcccgacaatcccaacagcaatggctgcagtgaatgcgctacatgggcggtggtttgct
ggtaaaatgatcactgcagcgtacgtaccttttccgacctaccataacctttttcctgat
tcggtaactgcagcccagttattgatgcctgtgcggcaatga
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