Oncorhynchus kisutch (coho salmon): 109907741
Help
Entry
109907741 CDS
T09179
Symbol
mbd4
Name
(RefSeq) methyl-CpG-binding domain protein 4 isoform X2
KO
K10801
methyl-CpG-binding domain protein 4 [EC:3.2.2.-]
Organism
oki
Oncorhynchus kisutch (coho salmon)
Pathway
oki03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
109907741 (mbd4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
oki03036
]
109907741 (mbd4)
03400 DNA repair and recombination proteins [BR:
oki03400
]
109907741 (mbd4)
Chromosome and associated proteins [BR:
oki03036
]
Eukaryotic type
Heterochromatin formation proteins
MBPs (metylated DNA binding proteins)
109907741 (mbd4)
DNA repair and recombination proteins [BR:
oki03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
109907741 (mbd4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MBD
HhH-GPD
RNA_pol_Rpc4
Motif
Other DBs
NCBI-GeneID:
109907741
NCBI-ProteinID:
XP_020361498
LinkDB
All DBs
Position
LG17:45649897..45657551
Genome browser
AA seq
809 aa
AA seq
DB search
MLSLDYHMYQAKTEPTVDTTCASPTDNNTVATRLKNNDLNTENPVTDTHFNPNSDTDTMA
VPVSDMRVTKEADPNAVKRQRTRQEDEESCPPSSMPPGWVRVVRRRKSGKTAGKMDIYIT
SPQGQRFRSRASLQAFLLRDAGGDLQIDDFDFTKAKSGSVAVTPLPSQERQRKVHQKHTR
HISEANIKEDRQNTEENMEEGRILSLPPNNTKIANSAKSCKQRTRPRDKRTIITHLRPDM
PHLARGNHRPAAGRGTETGQPSDTNEDIKETNIQASVRRGEDDETERRLKAVVDDVILEK
SPQRRPGLLREKLLRLAPPTDLQDALIGQEDQLPVSLLLVPVLRVQSASESEGEAEGVGV
GETEGVENIEAEVHDEELPSPQTTGERCTPLKDSQSKLLGEKRKTSPYFSRKSMRDGLSP
PRRKALRKWTPPRSPFHLVQETLFHDPWKLLVATVFLNKTSGKMAIPVLWQFFKLYPSAE
ETRGAEWKPLSVLLRSLGLYELRAKIIIRFSDEYLTKQWRYPIELHGIGKYGNDSYRIFC
VEEWRQVEPQDHMLNKYHAWLWENHERRAPVHLATLGSSFILCLHTSNLIPRATVATAKH
PTAVCLNSTTLSIPRSTPVRQSRYLMVTPLTLPIIISPASAALPVSQSVPRLDPLHPPLA
HRRTVSLETPAVHHHNHQRALVMQRKEHYRYHQVWRKPFYGSCTEREEYRSEVRQQLKRQ
MEEKRAGLMLKLTSKAEEAEFLQEVDRLALSSEKQQRIQHSRAMSHYRDENKKLMEQSWM
DRALIRSQEALMERELLRHNPINWSGTLK
NT seq
2430 nt
NT seq
+upstream
nt +downstream
nt
atgctatcactggattatcatatgtatcaggctaaaactgagcctactgttgatacaacc
tgtgcttcccctacggacaacaacacagtcgcaaccaggctcaaaaacaatgacctcaac
acagagaaccctgtcactgacacacattttaatcctaactctgacacagacactatggct
gttccagtttcagatatgagagttaccaaagaggctgatcccaatgcagtcaagagacag
cggaccagacaggaagatgaggagtcgtgcccaccttctagtatgccgccgggctgggtg
agagtagtgagacggaggaaaagtgggaagactgcaggcaaaatggacatctatataaca
agtccccagggacagaggttccggtccagggcgtctcttcaagctttccttctcagagat
gcaggaggggatctacagatagatgactttgacttcaccaaagccaagagtggcagtgta
gctgtgactccgctgccaagccaggagagacagaggaaagttcatcagaaacacacacgt
catatctcagaggccaatattaaagaagaccggcagaacacagaggagaatatggaagag
ggtagaatattaagcctgcctccaaataacacaaaaatagccaattccgcaaaatcctgc
aagcagaggaccagacccagagacaagagaacgataataactcatctgaggcctgacatg
cctcacctggcaagggggaatcacagaccggcagctgggagaggcacagaaacgggccaa
ccatcagacacaaatgaagacatcaaagagacaaacatacaagcctctgtgagaaggggt
gaggatgatgagactgagaggcgtctgaaggcggtagttgacgatgtcatactggagaag
agcccccagaggaggccggggctgctgagagaaaagctgctcaggctggccccgcccact
gatctacaagatgctctcattggtcaagaagatcaacttcctgtgtcactgttacttgtc
ccagtccttagggtgcagtctgcttctgagagcgagggggaggctgagggtgtgggagtg
ggggagactgagggagtggagaatatagaggcagaggtgcatgacgaagagctgccatct
ccccagaccactggagagcgctgtacaccactgaaagattcccagagcaaactgttagga
gagaaacggaagaccagtccttatttcagccggaagtcaatgagagatggtctaagccct
cccaggaggaaagccttaaggaagtggacccctcctcgctcccccttccacctggtgcag
gagacccttttccacgacccttggaaactcctggtagccaccgtgttcctcaacaaaacc
agcggtaaaatggccatcccggtgttgtggcagttctttaagctttacccatcagcggag
gagaccaggggggcagagtggaagcccctgtctgtgctgctgagatctttgggcctgtat
gaactgcgagccaaaatcatcatcaggttctctgatgaatacctgaccaagcagtggcgc
taccctatagagctgcatgggattgggaagtatggcaatgactcctacaggatcttctgt
gtagaggagtggagacaggttgaaccccaggaccacatgctgaacaagtaccatgcttgg
ctgtgggagaaccatgagaggagagcaccagtgcatttagctacgctaggctccagcttt
attctctgtctgcacacgagtaacctgattcccagggcaaccgttgccaccgcaaaacac
ccaactgctgtttgcttgaattccacaactctgtctattcctcgatccacacctgtccgc
caaagtcgctaccttatggtcactcccctgacattgcccatcatcatctcacctgcctcg
gcagcactgccagtcagccagtctgtccccagactggaccccctccatcctcctctggcc
catagacggactgtcagcctggagacccctgctgtgcatcaccacaaccaccagagggca
ctggttatgcagagaaaggagcactataggtatcaccaggtgtggcggaagccattctac
ggatcctgcactgaaagagaggagtacagatcggaggtacgtcagcagctgaagaggcag
atggaggagaagagggcggggctgatgctgaagttgaccagtaaggcagaggaggctgag
tttttacaggaagtggatcgcttggctctgtccagtgagaaacagcagaggatccagcac
agcagagcgatgagccactacagagatgagaacaagaagctgatggagcagagctggatg
gacagggcactgattcgctctcaggaggccctgatggagagagaactgctacgccacaac
cccattaattggagcggcacactgaaatag
DBGET
integrated database retrieval system
