Oncorhynchus kisutch (coho salmon): 109907766
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Entry
109907766 CDS
T09179
Name
(RefSeq) peroxisome proliferator-activated receptor gamma isoform X1
KO
K08530
peroxisome proliferator-activated receptor gamma
Organism
oki
Oncorhynchus kisutch (coho salmon)
Pathway
oki03320
PPAR signaling pathway
oki04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
109907766
09150 Organismal Systems
09152 Endocrine system
03320 PPAR signaling pathway
109907766
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
oki03000
]
109907766
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
oki03310
]
109907766
Transcription factors [BR:
oki03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
109907766
Nuclear receptors [BR:
oki03310
]
1. Thyroid hormone like
1C. Peroxisome proliferator-activated receptor (PPAR)
109907766
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
PPARgamma_N
Motif
Other DBs
NCBI-GeneID:
109907766
NCBI-ProteinID:
XP_020361547
Ensembl:
ENSOKIG00005005496
LinkDB
All DBs
Position
LG17:complement(46970121..46979109)
Genome browser
AA seq
518 aa
AA seq
DB search
MDNKMNSFDMETLSTLDYPYLPSLEYSHNSSHHHSSDRSHSCNHSPDRSHSFNHSPDRSQ
SFNHSPDRSLSCNHSPDRNHSINHSPDRSHSYNYTYSVYQRSVNDKPLSPSQSSDCSIVS
LSRPRPHSNPPTYTDASSPLNIDCRVCGDTASGFHYGVHACEGCKGFFRRTVRLKLVYDH
CELHCRIHKKSRNKCQYCRFQKCLLVGMSHDAIRFGRMPQVEREKLQAEFIDVDPRNPES
ADLRALSRQLCLSYHRHFPLTKSKAKAILSGKTHGNSPFVIHDMKSLTAGQYFINCRQLP
VLERQRSVLPPEEPAGELELSVFRRIQIRSAEAVQEVTEFSKSIPGFTELDMNDQVILLK
YGVIEVMTTMLAPLMNKDGTLFAYGQIFMTREFLKSLRKPFCEMMEPKFEFAVKFNVLEL
DDSDMALFFAVIILSGDRPGLVNVKPIEDLQETVLQALELQLKTIHPDCPQLFAKLLQKM
TDLRQLVANHVRLIHLLKKQELEVCLHPLLQEIMRDLY
NT seq
1557 nt
NT seq
+upstream
nt +downstream
nt
atggacaacaagatgaatagttttgacatggagaccctgtcgacgctggactacccttac
ctcccttctctagagtacagccacaacagttcccatcaccacagctcagacagaagccac
tcatgcaaccacagcccagacagaagccactcatttaaccacagcccagacagaagccaa
tcatttaaccacagcccagacagaagcctctcatgtaaccacagcccagacagaaaccac
tcaatcaaccacagcccagacagaagccactcatacaactacacatacagcgtgtatcaa
cgttcagtaaacgataagcccttatcgccttctcagtctagcgactgtagcattgtcagc
ctgtccagaccccggcctcactccaatccccctacttacacagacgccagctctccgctc
aatattgactgtagagtgtgtggggacacggcttcaggcttccactatggcgtccatgcc
tgtgagggctgcaagggattcttccgcagaaccgtgcggttaaaactggtgtatgaccac
tgtgagctgcactgtcggattcacaaaaagagccggaataagtgccaatactgtcgcttt
cagaaatgtctgcttgtgggcatgtcacacgatgccatccgcttcggccggatgccccag
gtggagagagagaagctgcaggctgagtttatcgatgtggaccccaggaacccagagtca
gcggacctgagagccctgtccagacagctgtgcttgtcctaccacagacactttcccctg
accaagagcaaggccaaggccatcctctctggaaagacacacggaaactcaccgtttgtc
atccatgacatgaagtctctgacagcgggtcagtactttataaactgtagacagctccca
gtactggagcgccagaggtccgtcctgccccctgaggagcctgctggggagctggagctc
tccgtcttccgccgcatccagatccgctccgccgaggccgtacaagaggtcacagagttc
tccaagagcatccctgggttcacagagctggacatgaacgaccaggtgatcctgctgaag
tacggggtcatcgaggtcatgacgaccatgctggcgccgctcatgaacaaggacggcaca
ctgtttgcctatggacagatcttcatgacccgagagttcctcaagagcctgaggaagccc
ttctgtgagatgatggagcccaagtttgagtttgcggtaaagttcaacgtgctggagctg
gacgatagtgatatggcgctcttcttcgccgtcatcatcctcagtggagaccgtccaggc
ctggtgaacgtgaagcccattgaggacctccaggagacagtgctgcaggccctggagctg
cagttgaagaccatccacccagactgcccccagctgttcgccaagctactgcagaagatg
accgacctgcggcagctggtggccaaccacgtccgcctcatccacctgctcaagaagcag
gagctggaggtgtgtctgcatcccctactgcaggagatcatgagagacctgtactaa
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